CircRNA Information

General Information
circRNA Basic Information
CircID chr11:130109429|130109581
Strand +
CircType exon
Host Gene ENSG00000084234.15;
Algorism CIRI2;
Sequence TTCTTCTTTTGTTTCAAAGCAGCTCTTGGTGCCTGTTGGATCAGGTTCCCATTTCCCAGTCTGAATGTTCACATGCATATTTAACTTCCCACAAAACATTGCGATTTGAGGCTCAGCAACAGCAAATCCTGTTCCGGCATTGGCTGCAAGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:130109429|130109581 hsa-miR-181c-5p 0 0 1
chr11:130109429|130109581 hsa-miR-181c-3p 0 0 1
chr11:130109429|130109581 hsa-miR-335-5p 0 0 1
chr11:130109429|130109581 hsa-miR-335-3p 0 0 1
chr11:130109429|130109581 hsa-miR-494-5p 0 0 1
chr11:130109429|130109581 hsa-miR-494-3p 0 0 1
chr11:130109429|130109581 hsa-miR-181d-5p 0 0 1
chr11:130109429|130109581 hsa-miR-181d-3p 0 0 1
chr11:130109429|130109581 hsa-miR-558 0 0 1
chr11:130109429|130109581 hsa-miR-586 0 0 1
chr11:130109429|130109581 hsa-miR-640 0 0 1
chr11:130109429|130109581 hsa-miR-1301-5p 0 0 1
chr11:130109429|130109581 hsa-miR-1301-3p 0 0 1
chr11:130109429|130109581 hsa-miR-543 0 0 1
chr11:130109429|130109581 hsa-miR-1292-5p 0 0 1
chr11:130109429|130109581 hsa-miR-1292-3p 0 0 1
chr11:130109429|130109581 hsa-miR-628-5p 0 0 1
chr11:130109429|130109581 hsa-miR-181a 0 0 1
chr11:130109429|130109581 hsa-miR-181b 0 0 1
chr11:130109429|130109581 hsa-miR-4314 0 1 0
chr11:130109429|130109581 hsa-miR-4265 1 0 0
chr11:130109429|130109581 hsa-miR-4262 0 1 0
chr11:130109429|130109581 hsa-miR-4269 0 1 0
chr11:130109429|130109581 hsa-miR-4463 1 1 0
chr11:130109429|130109581 hsa-miR-4530 1 0 0
chr11:130109429|130109581 hsa-miR-4648 1 0 0
chr11:130109429|130109581 hsa-miR-4654 1 0 0
chr11:130109429|130109581 hsa-miR-4663 0 1 0
chr11:130109429|130109581 hsa-miR-4706 1 0 0
chr11:130109429|130109581 hsa-miR-5093 0 1 0
chr11:130109429|130109581 hsa-miR-8089 1 0 0
chr11:130109429|130109581 hsa-miR-10226 1 0 0
chr11:130109429|130109581 hsa-miR-6799-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6089 1 0 0
chr11:130109429|130109581 hsa-miR-3192-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6759-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6748-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6796-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6829-5p 1 0 0
chr11:130109429|130109581 hsa-miR-7156-3p 0 1 0
chr11:130109429|130109581 hsa-miR-5584-5p 0 1 0
chr11:130109429|130109581 hsa-miR-2114-3p 1 1 0
chr11:130109429|130109581 hsa-miR-3151-3p 0 1 0
chr11:130109429|130109581 hsa-miR-1273h-5p 0 1 0
chr11:130109429|130109581 hsa-miR-6778-5p 1 0 0
chr11:130109429|130109581 hsa-miR-10401-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6763-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6779-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6780a-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6808-5p 1 0 0
chr11:130109429|130109581 hsa-miR-5196-5p 1 0 0
chr11:130109429|130109581 hsa-miR-3689a-3p 1 1 0
chr11:130109429|130109581 hsa-miR-6777-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6883-5p 1 0 0
chr11:130109429|130109581 hsa-miR-6889-5p 1 0 0
chr11:130109429|130109581 hsa-miR-939-5p 1 0 0
chr11:130109429|130109581 hsa-miR-4769-5p 1 0 0
chr11:130109429|130109581 hsa-miR-1199-5p 0 1 0
chr11:130109429|130109581 hsa-miR-4646-5p 0 1 0
chr11:130109429|130109581 hsa-miR-9851-3p 0 1 0
chr11:130109429|130109581 hsa-miR-6751-3p 0 1 0
chr11:130109429|130109581 hsa-miR-619-5p 1 0 0
chr11:130109429|130109581 hsa-miR-4676-5p 0 1 0
chr11:130109429|130109581 hsa-miR-6715b-5p 0 1 0
chr11:130109429|130109581 hsa-miR-7157-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:130109429|130109581
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MFQSSSWCLLDQVPISQSECSHAYLTSHKTLRFEAQQQQILFRHWLQE
Nucleotide Sequence TTGTTTCAAAGCAGCTCTTGGTGCCTGTTGGATCAGGTTCCCATTTCCCAGTCTGAATGTTCACATGCATATTTAACTTCCCACAAAACATTGCGATTTGAGGCTCAGCAACAGCAAATCCTGTTCCGGCATTGGCTGCAAGAG

CircID chr11:130109429|130109581
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEE
Nucleotide Sequence ATGTTTTGTGGGAAGTTAAATATGCATGTGAACATTCAGACTGGGAAATGGGAACCTGATCCAACAGGCACCAAGAGCTGCTTTGAAACAAAAGAAGAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites