CircRNA Information

General Information
circRNA Basic Information
CircID chr11:130476367|130476642
Strand -
CircType exon
Host Gene ENSG00000166106.3;
Algorism CIRI2;
Sequence CTCGACATGCTGGAGTGGGGTCTGGCAGGAGCTGATGACAGTTTGAGGGACTTGAGTGTCCCTAGCCTGGCAGTTGGCTCCCGGAAGCACTAGACACTGACACTCATTGGTAGACCCTCCCTCCCCGCCGTTGTGTTTGGTTCTTTTGCACTCCATGTACTGCAGAAGGATGGAAGGACCTGGGTGCTGGCTGGGCTGTGTATACTGTGTATACAAGGGAGCTGGCTGCTGAGGTGACCACAGCCTTCTCCTAATAAAGCTGTAAGTATTTAAAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:130476367|130476642 hsa-miR-19a-5p 0 0 1
chr11:130476367|130476642 hsa-miR-19a-3p 0 0 1
chr11:130476367|130476642 hsa-miR-214-5p 0 0 1
chr11:130476367|130476642 hsa-miR-214-3p 0 0 1
chr11:130476367|130476642 hsa-miR-223-5p 0 0 1
chr11:130476367|130476642 hsa-miR-223-3p 0 0 1
chr11:130476367|130476642 hsa-miR-122-5p 0 0 1
chr11:130476367|130476642 hsa-miR-122-3p 0 0 1
chr11:130476367|130476642 hsa-miR-130a-5p 0 0 1
chr11:130476367|130476642 hsa-miR-130a-3p 0 0 1
chr11:130476367|130476642 hsa-miR-144-5p 0 0 1
chr11:130476367|130476642 hsa-miR-144-3p 0 0 1
chr11:130476367|130476642 hsa-miR-301a-5p 0 0 1
chr11:130476367|130476642 hsa-miR-301a-3p 0 0 1
chr11:130476367|130476642 hsa-miR-130b-5p 0 0 1
chr11:130476367|130476642 hsa-miR-130b-3p 0 0 1
chr11:130476367|130476642 hsa-miR-520f-5p 0 0 1
chr11:130476367|130476642 hsa-miR-520f-3p 0 0 1
chr11:130476367|130476642 hsa-miR-568 0 0 1
chr11:130476367|130476642 hsa-miR-600 0 0 1
chr11:130476367|130476642 hsa-miR-623 0 0 1
chr11:130476367|130476642 hsa-miR-643 0 0 1
chr11:130476367|130476642 hsa-miR-454-5p 0 0 1
chr11:130476367|130476642 hsa-miR-454-3p 0 0 1
chr11:130476367|130476642 hsa-miR-766-5p 0 0 1
chr11:130476367|130476642 hsa-miR-766-3p 0 0 1
chr11:130476367|130476642 hsa-miR-301b-5p 0 0 1
chr11:130476367|130476642 hsa-miR-301b-3p 0 0 1
chr11:130476367|130476642 hsa-miR-922 0 0 1
chr11:130476367|130476642 hsa-miR-1182 0 1 1
chr11:130476367|130476642 hsa-miR-1237-5p 0 0 1
chr11:130476367|130476642 hsa-miR-1237-3p 0 0 1
chr11:130476367|130476642 hsa-miR-1205 0 0 1
chr11:130476367|130476642 hsa-miR-1248 0 0 1
chr11:130476367|130476642 hsa-miR-548g-5p 0 0 1
chr11:130476367|130476642 hsa-miR-548g-3p 0 0 1
chr11:130476367|130476642 hsa-miR-1321 0 0 1
chr11:130476367|130476642 hsa-miR-512-3p 0 0 1
chr11:130476367|130476642 hsa-miR-1184 0 0 1
chr11:130476367|130476642 hsa-miR-574-5p 1 0 1
chr11:130476367|130476642 hsa-miR-508-5p 0 0 1
chr11:130476367|130476642 hsa-miR-338-3p 0 0 1
chr11:130476367|130476642 hsa-miR-516a-3p 0 0 1
chr11:130476367|130476642 hsa-miR-548b-3p 0 0 1
chr11:130476367|130476642 hsa-miR-371-5p 0 0 1
chr11:130476367|130476642 hsa-miR-19b 0 0 1
chr11:130476367|130476642 hsa-miR-544 0 0 1
chr11:130476367|130476642 hsa-miR-663 0 0 1
chr11:130476367|130476642 hsa-miR-663a 1 0 0
chr11:130476367|130476642 hsa-miR-658 1 0 0
chr11:130476367|130476642 hsa-miR-1258 0 1 0
chr11:130476367|130476642 hsa-miR-1976 0 1 0
chr11:130476367|130476642 hsa-miR-3141 1 0 0
chr11:130476367|130476642 hsa-miR-4286 0 1 0
chr11:130476367|130476642 hsa-miR-4287 0 1 0
chr11:130476367|130476642 hsa-miR-3659 1 0 0
chr11:130476367|130476642 hsa-miR-4473 0 1 0
chr11:130476367|130476642 hsa-miR-4516 0 1 0
chr11:130476367|130476642 hsa-miR-3960 1 0 0
chr11:130476367|130476642 hsa-miR-4651 1 0 0
chr11:130476367|130476642 hsa-miR-4672 0 1 0
chr11:130476367|130476642 hsa-miR-4675 0 1 0
chr11:130476367|130476642 hsa-miR-4706 1 1 0
chr11:130476367|130476642 hsa-miR-4739 1 0 0
chr11:130476367|130476642 hsa-miR-5572 1 0 0
chr11:130476367|130476642 hsa-miR-5685 0 1 0
chr11:130476367|130476642 hsa-miR-6075 1 0 0
chr11:130476367|130476642 hsa-miR-6090 1 0 0
chr11:130476367|130476642 hsa-miR-6127 1 0 0
chr11:130476367|130476642 hsa-miR-7150 1 0 0
chr11:130476367|130476642 hsa-miR-7974 0 1 0
chr11:130476367|130476642 hsa-miR-8072 1 1 0
chr11:130476367|130476642 hsa-miR-8085 1 0 0
chr11:130476367|130476642 hsa-miR-4731-5p 1 0 0
chr11:130476367|130476642 hsa-miR-504-3p 1 1 0
chr11:130476367|130476642 hsa-miR-4726-3p 0 1 0
chr11:130476367|130476642 hsa-miR-215-3p 0 1 0
chr11:130476367|130476642 hsa-miR-7106-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6825-5p 1 1 0
chr11:130476367|130476642 hsa-miR-6799-5p 1 0 0
chr11:130476367|130476642 hsa-miR-4755-3p 0 1 0
chr11:130476367|130476642 hsa-miR-874-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6742-5p 1 0 0
chr11:130476367|130476642 hsa-miR-3180-3p 1 0 0
chr11:130476367|130476642 hsa-miR-4697-3p 0 1 0
chr11:130476367|130476642 hsa-miR-6868-3p 0 1 0
chr11:130476367|130476642 hsa-miR-6827-5p 0 1 0
chr11:130476367|130476642 hsa-miR-6770-5p 0 1 0
chr11:130476367|130476642 hsa-miR-6858-3p 0 1 0
chr11:130476367|130476642 hsa-miR-6786-5p 1 1 0
chr11:130476367|130476642 hsa-miR-7109-5p 1 0 0
chr11:130476367|130476642 hsa-miR-1229-5p 1 0 0
chr11:130476367|130476642 hsa-miR-30c-2-3p 0 1 0
chr11:130476367|130476642 hsa-miR-1908-5p 1 1 0
chr11:130476367|130476642 hsa-miR-6771-5p 1 0 0
chr11:130476367|130476642 hsa-miR-3648 1 0 0
chr11:130476367|130476642 hsa-miR-149-3p 1 1 0
chr11:130476367|130476642 hsa-miR-6736-3p 0 1 0
chr11:130476367|130476642 hsa-miR-3162-5p 1 0 0
chr11:130476367|130476642 hsa-miR-3065-3p 0 1 0
chr11:130476367|130476642 hsa-miR-744-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6871-3p 0 1 0
chr11:130476367|130476642 hsa-miR-6856-3p 0 1 0
chr11:130476367|130476642 hsa-miR-6738-3p 0 1 0
chr11:130476367|130476642 hsa-miR-6733-3p 0 1 0
chr11:130476367|130476642 hsa-miR-3617-3p 0 1 0
chr11:130476367|130476642 hsa-miR-5587-5p 0 1 0
chr11:130476367|130476642 hsa-miR-4802-3p 0 1 0
chr11:130476367|130476642 hsa-miR-1207-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6787-5p 1 1 0
chr11:130476367|130476642 hsa-miR-6812-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6816-5p 1 0 0
chr11:130476367|130476642 hsa-miR-1343-5p 1 0 0
chr11:130476367|130476642 hsa-miR-3180 1 0 0
chr11:130476367|130476642 hsa-miR-6756-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6769a-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6819-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6851-5p 1 0 0
chr11:130476367|130476642 hsa-miR-1249-5p 1 1 0
chr11:130476367|130476642 hsa-miR-6763-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6779-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6780a-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6797-5p 1 1 0
chr11:130476367|130476642 hsa-miR-7111-5p 1 0 0
chr11:130476367|130476642 hsa-miR-4728-5p 1 1 0
chr11:130476367|130476642 hsa-miR-5196-5p 1 0 0
chr11:130476367|130476642 hsa-miR-10396a-5p 1 0 0
chr11:130476367|130476642 hsa-miR-10396b-5p 1 0 0
chr11:130476367|130476642 hsa-miR-328-5p 1 0 0
chr11:130476367|130476642 hsa-miR-4725-3p 1 0 0
chr11:130476367|130476642 hsa-miR-4749-5p 1 0 0
chr11:130476367|130476642 hsa-miR-675-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6777-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6883-5p 1 1 0
chr11:130476367|130476642 hsa-miR-6889-5p 1 1 0
chr11:130476367|130476642 hsa-miR-939-5p 1 0 0
chr11:130476367|130476642 hsa-miR-1238-5p 1 0 0
chr11:130476367|130476642 hsa-miR-4758-5p 1 0 0
chr11:130476367|130476642 hsa-miR-30c-1-3p 0 1 0
chr11:130476367|130476642 hsa-miR-6766-5p 1 0 0
chr11:130476367|130476642 hsa-miR-6785-5p 1 0 0
chr11:130476367|130476642 hsa-miR-4722-3p 1 1 0
chr11:130476367|130476642 hsa-miR-6727-3p 0 1 0
chr11:130476367|130476642 hsa-miR-4690-3p 0 1 0
chr11:130476367|130476642 hsa-miR-371a-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:130476367|130476642
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MLEWGLAGADDSLRDLSVPSLAVGSRKH
Nucleotide Sequence ATGCTGGAGTGGGGTCTGGCAGGAGCTGATGACAGTTTGAGGGACTTGAGTGTCCCTAGCCTGGCAGTTGGCTCCCGGAAGCACTAG
CircID chr11:130476367|130476642
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence MTLIGRPSLPAVVFGSFALHVLQKDGRTWVLAGLCILCIQGSWLLR
Nucleotide Sequence CTGACACTCATTGGTAGACCCTCCCTCCCCGCCGTTGTGTTTGGTTCTTTTGCACTCCATGTACTGCAGAAGGATGGAAGGACCTGGGTGCTGGCTGGGCTGTGTATACTGTGTATACAAGGGAGCTGGCTGCTGAGGTGA
CircID chr11:130476367|130476642
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence MVDPPSPPLCLVLLHSMYCRRMEGPGCWLGCVYCVYKGAGC
Nucleotide Sequence TTGGTAGACCCTCCCTCCCCGCCGTTGTGTTTGGTTCTTTTGCACTCCATGTACTGCAGAAGGATGGAAGGACCTGGGTGCTGGCTGGGCTGTGTATACTGTGTATACAAGGGAGCTGGCTGCTGA
CircID chr11:130476367|130476642
ORF Type ORF4
Protein Length 81
Nucleotide Length 243
Protein Sequence MWSPQQPAPLYTQYTQPSQHPGPSILLQYMECKRTKHNGGEGGSTNECQCLVLPGANCQARDTQVPQTVISSCQTPLQHVE
Nucleotide Sequence CTGTGGTCACCTCAGCAGCCAGCTCCCTTGTATACACAGTATACACAGCCCAGCCAGCACCCAGGTCCTTCCATCCTTCTGCAGTACATGGAGTGCAAAAGAACCAAACACAACGGCGGGGAGGGAGGGTCTACCAATGAGTGTCAGTGTCTAGTGCTTCCGGGAGCCAACTGCCAGGCTAGGGACACTCAAGTCCCTCAAACTGTCATCAGCTCCTGCCAGACCCCACTCCAGCATGTCGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab