CircRNA Information

General Information
circRNA Basic Information
CircID chr11:134246993|134247169
Strand +
CircType exon
Host Gene ENSG00000151502.9;
Algorism CIRI2;
Sequence CTTGCCTTCCTCGGTTCTGCTGCCGCCAGTCGCCCTCCTAGGCTACCCAAAATGCCTCTCCCTCCAGTCTCAGCTCTGATCCATGAGCCCTGCCAAAGGCCTGAGACTGCACTGATCTCAGGAAAACAGAAGTCTTCCTTTCCCACACTAACTGAAAGGTGACACAGGAACCAACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:134246993|134247169 hsa-miR-96-5p 0 0 1
chr11:134246993|134247169 hsa-miR-96-3p 0 0 1
chr11:134246993|134247169 hsa-miR-148a-5p 0 0 1
chr11:134246993|134247169 hsa-miR-148a-3p 0 0 1
chr11:134246993|134247169 hsa-miR-182-5p 0 0 1
chr11:134246993|134247169 hsa-miR-182-3p 0 0 1
chr11:134246993|134247169 hsa-miR-152-5p 0 0 1
chr11:134246993|134247169 hsa-miR-152-3p 0 0 1
chr11:134246993|134247169 hsa-miR-383-5p 0 0 1
chr11:134246993|134247169 hsa-miR-383-3p 0 0 1
chr11:134246993|134247169 hsa-miR-148b-5p 0 0 1
chr11:134246993|134247169 hsa-miR-148b-3p 0 0 1
chr11:134246993|134247169 hsa-miR-571 0 0 1
chr11:134246993|134247169 hsa-miR-592 0 0 1
chr11:134246993|134247169 hsa-miR-597-5p 0 0 1
chr11:134246993|134247169 hsa-miR-597-3p 0 0 1
chr11:134246993|134247169 hsa-miR-648 0 0 1
chr11:134246993|134247169 hsa-miR-659-5p 0 0 1
chr11:134246993|134247169 hsa-miR-659-3p 0 0 1
chr11:134246993|134247169 hsa-miR-1271-5p 0 0 1
chr11:134246993|134247169 hsa-miR-1271-3p 0 0 1
chr11:134246993|134247169 hsa-miR-922 0 1 1
chr11:134246993|134247169 hsa-miR-935 0 0 1
chr11:134246993|134247169 hsa-miR-1200 0 0 1
chr11:134246993|134247169 hsa-miR-1266-5p 0 0 1
chr11:134246993|134247169 hsa-miR-1266-3p 0 0 1
chr11:134246993|134247169 hsa-miR-1225-5p 1 0 1
chr11:134246993|134247169 hsa-miR-490-5p 0 0 1
chr11:134246993|134247169 hsa-miR-1207-5p 1 0 1
chr11:134246993|134247169 hsa-miR-7 0 0 1
chr11:134246993|134247169 hsa-miR-604 1 0 0
chr11:134246993|134247169 hsa-miR-650 1 0 0
chr11:134246993|134247169 hsa-miR-661 1 0 0
chr11:134246993|134247169 hsa-miR-663a 1 0 0
chr11:134246993|134247169 hsa-miR-936 1 0 0
chr11:134246993|134247169 hsa-miR-1275 1 0 0
chr11:134246993|134247169 hsa-miR-3135a 0 1 0
chr11:134246993|134247169 hsa-miR-544b 0 1 0
chr11:134246993|134247169 hsa-miR-3141 1 0 0
chr11:134246993|134247169 hsa-miR-3196 1 0 0
chr11:134246993|134247169 hsa-miR-4298 1 0 0
chr11:134246993|134247169 hsa-miR-3652 1 0 0
chr11:134246993|134247169 hsa-miR-3937 1 0 0
chr11:134246993|134247169 hsa-miR-4437 0 1 0
chr11:134246993|134247169 hsa-miR-3135b 1 0 0
chr11:134246993|134247169 hsa-miR-4463 1 1 0
chr11:134246993|134247169 hsa-miR-4467 1 0 0
chr11:134246993|134247169 hsa-miR-4488 1 0 0
chr11:134246993|134247169 hsa-miR-4498 1 0 0
chr11:134246993|134247169 hsa-miR-4510 0 1 0
chr11:134246993|134247169 hsa-miR-4513 1 0 0
chr11:134246993|134247169 hsa-miR-3960 1 1 0
chr11:134246993|134247169 hsa-miR-4651 1 0 0
chr11:134246993|134247169 hsa-miR-4654 1 0 0
chr11:134246993|134247169 hsa-miR-4656 1 0 0
chr11:134246993|134247169 hsa-miR-4688 1 0 0
chr11:134246993|134247169 hsa-miR-4721 1 0 0
chr11:134246993|134247169 hsa-miR-4739 1 0 0
chr11:134246993|134247169 hsa-miR-5698 1 0 0
chr11:134246993|134247169 hsa-miR-5787 1 0 0
chr11:134246993|134247169 hsa-miR-6090 1 0 0
chr11:134246993|134247169 hsa-miR-6127 1 0 0
chr11:134246993|134247169 hsa-miR-6130 0 1 0
chr11:134246993|134247169 hsa-miR-6132 0 1 0
chr11:134246993|134247169 hsa-miR-6133 1 1 0
chr11:134246993|134247169 hsa-miR-7150 1 0 0
chr11:134246993|134247169 hsa-miR-8052 1 0 0
chr11:134246993|134247169 hsa-miR-8072 1 0 0
chr11:134246993|134247169 hsa-miR-8085 1 1 0
chr11:134246993|134247169 hsa-miR-8087 0 1 0
chr11:134246993|134247169 hsa-miR-134-5p 1 0 0
chr11:134246993|134247169 hsa-miR-7-5p 0 1 0
chr11:134246993|134247169 hsa-miR-6765-5p 1 0 0
chr11:134246993|134247169 hsa-miR-7106-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6825-5p 1 0 0
chr11:134246993|134247169 hsa-miR-219a-1-3p 0 1 0
chr11:134246993|134247169 hsa-miR-6515-5p 0 1 0
chr11:134246993|134247169 hsa-miR-6089 1 0 0
chr11:134246993|134247169 hsa-miR-3192-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6880-5p 1 0 0
chr11:134246993|134247169 hsa-miR-4695-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6820-5p 1 1 0
chr11:134246993|134247169 hsa-miR-6759-5p 1 0 0
chr11:134246993|134247169 hsa-miR-197-5p 1 0 0
chr11:134246993|134247169 hsa-miR-3151-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6796-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6732-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6805-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6798-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6760-5p 1 0 0
chr11:134246993|134247169 hsa-miR-5088-5p 1 1 0
chr11:134246993|134247169 hsa-miR-4738-3p 1 0 0
chr11:134246993|134247169 hsa-miR-1229-5p 1 1 0
chr11:134246993|134247169 hsa-miR-885-3p 1 0 0
chr11:134246993|134247169 hsa-miR-3127-5p 0 1 0
chr11:134246993|134247169 hsa-miR-92b-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6749-5p 1 0 0
chr11:134246993|134247169 hsa-miR-3160-3p 0 1 0
chr11:134246993|134247169 hsa-miR-149-3p 1 0 0
chr11:134246993|134247169 hsa-miR-4652-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6509-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6847-3p 0 1 0
chr11:134246993|134247169 hsa-miR-10400-5p 1 1 0
chr11:134246993|134247169 hsa-miR-1233-5p 1 0 0
chr11:134246993|134247169 hsa-miR-4763-3p 1 1 0
chr11:134246993|134247169 hsa-miR-6769b-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6778-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6787-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6812-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6865-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6775-5p 1 0 0
chr11:134246993|134247169 hsa-miR-1343-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6737-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6743-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6756-5p 1 0 0
chr11:134246993|134247169 hsa-miR-10401-5p 1 1 0
chr11:134246993|134247169 hsa-miR-1249-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6779-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6797-5p 1 1 0
chr11:134246993|134247169 hsa-miR-7111-5p 1 0 0
chr11:134246993|134247169 hsa-miR-4728-5p 1 1 0
chr11:134246993|134247169 hsa-miR-6780b-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6836-5p 0 1 0
chr11:134246993|134247169 hsa-miR-10396b-5p 1 0 0
chr11:134246993|134247169 hsa-miR-1237-5p 1 0 0
chr11:134246993|134247169 hsa-miR-328-5p 1 0 0
chr11:134246993|134247169 hsa-miR-4632-5p 1 0 0
chr11:134246993|134247169 hsa-miR-4649-5p 1 0 0
chr11:134246993|134247169 hsa-miR-4685-5p 1 0 0
chr11:134246993|134247169 hsa-miR-4725-3p 1 0 0
chr11:134246993|134247169 hsa-miR-4726-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6729-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6794-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6795-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6846-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6858-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6883-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6885-5p 1 1 0
chr11:134246993|134247169 hsa-miR-6511a-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6731-5p 1 1 0
chr11:134246993|134247169 hsa-miR-4747-5p 1 0 0
chr11:134246993|134247169 hsa-miR-6785-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:134246993|134247169
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MPLPPVSALIHEPCQRPETALISGKQKSSFPTLTER
Nucleotide Sequence ATGCCTCTCCCTCCAGTCTCAGCTCTGATCCATGAGCCCTGCCAAAGGCCTGAGACTGCACTGATCTCAGGAAAACAGAAGTCTTCCTTTCCCACACTAACTGAAAGGTGA
CircID chr11:134246993|134247169
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence LPSSVLLPPVALLGYPKCLSLQSQL
Nucleotide Sequence TTGCCTTCCTCGGTTCTGCTGCCGCCAGTCGCCCTCCTAGGCTACCCAAAATGCCTCTCCCTCCAGTCTCAGCTCTGA
CircID chr11:134246993|134247169
ORF Type ORF3
Protein Length 55
Nucleotide Length 165
Protein Sequence MCHLSVSVGKEDFCFPEISAVSGLWQGSWIRAETGGRGILGSLGGRLAAAEPRKA
Nucleotide Sequence CTGTGTCACCTTTCAGTTAGTGTGGGAAAGGAAGACTTCTGTTTTCCTGAGATCAGTGCAGTCTCAGGCCTTTGGCAGGGCTCATGGATCAGAGCTGAGACTGGAGGGAGAGGCATTTTGGGTAGCCTAGGAGGGCGACTGGCGGCAGCAGAACCGAGGAAGGCA
CircID chr11:134246993|134247169
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MRSVQSQAFGRAHGSELRLEGEAFWVA
Nucleotide Sequence CTGAGATCAGTGCAGTCTCAGGCCTTTGGCAGGGCTCATGGATCAGAGCTGAGACTGGAGGGAGAGGCATTTTGGGTAGCCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab