CircRNA Information

General Information
circRNA Basic Information
CircID chr11:1757332|1757479
Strand +
CircType exon
Host Gene ENSG00000250644.2;
Algorism CIRI2;
Sequence CAAGCAGCCAGGCATCACCTTCATCGCAGCCAAGTTCGATGGCATCCTGGGCATGGCCTACCCCCGCATCTCCGTCAACAACGTGCTGCCCGTCTTCGACAACCTGATGCAGCAGAAGCTGGTGGACCAGAACATCTTCTCCTTCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:1757332|1757479 hsa-miR-493-5p 0 0 1
chr11:1757332|1757479 hsa-miR-493-3p 0 0 1
chr11:1757332|1757479 hsa-miR-604 0 0 1
chr11:1757332|1757479 hsa-miR-647 0 0 1
chr11:1757332|1757479 hsa-miR-661 0 0 1
chr11:1757332|1757479 hsa-miR-653-5p 0 0 1
chr11:1757332|1757479 hsa-miR-653-3p 0 0 1
chr11:1757332|1757479 hsa-miR-744-5p 0 0 1
chr11:1757332|1757479 hsa-miR-744-3p 0 0 1
chr11:1757332|1757479 hsa-miR-1226-5p 0 0 1
chr11:1757332|1757479 hsa-miR-1226-3p 0 0 1
chr11:1757332|1757479 hsa-miR-1253 0 0 1
chr11:1757332|1757479 hsa-miR-483-5p 0 0 1
chr11:1757332|1757479 hsa-miR-1254 0 0 1
chr11:1757332|1757479 hsa-miR-453 0 0 1
chr11:1757332|1757479 hsa-miR-3147 1 0 0
chr11:1757332|1757479 hsa-miR-3916 1 0 0
chr11:1757332|1757479 hsa-miR-4488 1 0 0
chr11:1757332|1757479 hsa-miR-4510 1 0 0
chr11:1757332|1757479 hsa-miR-4706 1 0 0
chr11:1757332|1757479 hsa-miR-4730 1 0 0
chr11:1757332|1757479 hsa-miR-5704 0 1 0
chr11:1757332|1757479 hsa-miR-6088 1 0 0
chr11:1757332|1757479 hsa-miR-7974 1 0 0
chr11:1757332|1757479 hsa-miR-8075 1 0 0
chr11:1757332|1757479 hsa-miR-1843 1 0 0
chr11:1757332|1757479 hsa-miR-181a-3p 0 1 0
chr11:1757332|1757479 hsa-miR-15a-3p 0 1 0
chr11:1757332|1757479 hsa-miR-4687-3p 1 0 0
chr11:1757332|1757479 hsa-miR-6799-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6833-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6089 1 0 0
chr11:1757332|1757479 hsa-miR-6783-5p 0 1 0
chr11:1757332|1757479 hsa-miR-4711-5p 0 1 0
chr11:1757332|1757479 hsa-miR-6772-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6796-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6782-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6835-5p 1 1 0
chr11:1757332|1757479 hsa-miR-4787-5p 1 0 0
chr11:1757332|1757479 hsa-miR-4715-5p 1 0 0
chr11:1757332|1757479 hsa-miR-4638-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6787-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6816-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6870-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6737-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6743-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6752-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6803-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6819-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6842-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6851-5p 1 0 0
chr11:1757332|1757479 hsa-miR-6722-3p 1 0 0
chr11:1757332|1757479 hsa-miR-6751-5p 1 0 0
chr11:1757332|1757479 hsa-miR-328-5p 1 0 0
chr11:1757332|1757479 hsa-miR-4632-5p 1 0 0
chr11:1757332|1757479 hsa-miR-4749-5p 1 0 0
chr11:1757332|1757479 hsa-miR-675-5p 1 0 0
chr11:1757332|1757479 hsa-miR-3085-3p 0 1 0
chr11:1757332|1757479 hsa-miR-323b-5p 0 1 0
chr11:1757332|1757479 hsa-miR-10524-5p 0 1 0
chr11:1757332|1757479 hsa-miR-410-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:1757332|1757479
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFY
Nucleotide Sequence CTGGGCATGGCCTACCCCCGCATCTCCGTCAACAACGTGCTGCCCGTCTTCGACAACCTGATGCAGCAGAAGCTGGTGGACCAGAACATCTTCTCCTTCTAC

CircID chr11:1757332|1757479
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MVHQLLLHQVVEDGQHVVDGDAGVGHAQDAIELGCDEGDAWLL
Nucleotide Sequence CTGGTCCACCAGCTTCTGCTGCATCAGGTTGTCGAAGACGGGCAGCACGTTGTTGACGGAGATGCGGGGGTAGGCCATGCCCAGGATGCCATCGAACTTGGCTGCGATGAAGGTGATGCCTGGCTGCTT

CircID chr11:1757332|1757479
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MFWSTSFCCIRLSKTGSTLLTEMRG
Nucleotide Sequence ATGTTCTGGTCCACCAGCTTCTGCTGCATCAGGTTGTCGAAGACGGGCAGCACGTTGTTGACGGAGATGCGGGGGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites