CircRNA Information

General Information
circRNA Basic Information
CircID chr11:1836500|1836824
Strand +
CircType exon
Host Gene ENSG00000149043.15;
Algorism CIRI2;
Sequence CACCACGGTCAGCCGGCCTGAGCTGGGCACGTACCGGAGAGAGAAGCACAGCTCCCCGACCTGCTCGGGCTGTGGGCAGCAAGAGGGGCTTCAGCCCGGGAGGGTGATTCTGGCCGAGTTGGGGCTCAGACCCCCGAAAATGCTGCCCATCAGGCCTGTCTTTCCGATGGCCCATAGGGCAGGGTCCCTGCCAGCTCTGCCTTGGGCTGTGGCCTGGTGACCAGCACCTCACCTGAGTGGCAGCCGGCGGGCCCAGCAGGTACCAGTGCTCCAGAACATGCTGCAGATCCACGGTGCCCAGTGGCAGACGGAGCTCACCCAGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:1836500|1836824 hsa-miR-107 0 1 1
chr11:1836500|1836824 hsa-miR-370-5p 0 0 1
chr11:1836500|1836824 hsa-miR-370-3p 0 0 1
chr11:1836500|1836824 hsa-miR-346 0 0 1
chr11:1836500|1836824 hsa-miR-504-5p 0 0 1
chr11:1836500|1836824 hsa-miR-504-3p 0 0 1
chr11:1836500|1836824 hsa-miR-510-5p 0 0 1
chr11:1836500|1836824 hsa-miR-510-3p 0 0 1
chr11:1836500|1836824 hsa-miR-612 1 1 1
chr11:1836500|1836824 hsa-miR-636 1 0 1
chr11:1836500|1836824 hsa-miR-920 0 1 1
chr11:1836500|1836824 hsa-miR-939-5p 0 0 1
chr11:1836500|1836824 hsa-miR-939-3p 0 0 1
chr11:1836500|1836824 hsa-miR-942-5p 0 0 1
chr11:1836500|1836824 hsa-miR-942-3p 0 0 1
chr11:1836500|1836824 hsa-miR-1226-5p 0 0 1
chr11:1836500|1836824 hsa-miR-1226-3p 0 0 1
chr11:1836500|1836824 hsa-miR-1205 0 0 1
chr11:1836500|1836824 hsa-miR-1294 0 0 1
chr11:1836500|1836824 hsa-miR-1299 0 0 1
chr11:1836500|1836824 hsa-miR-1262 0 0 1
chr11:1836500|1836824 hsa-miR-1263 0 0 1
chr11:1836500|1836824 hsa-miR-125a-3p 0 1 1
chr11:1836500|1836824 hsa-miR-1225-3p 1 1 1
chr11:1836500|1836824 hsa-miR-296-5p 0 0 1
chr11:1836500|1836824 hsa-miR-542-5p 0 0 1
chr11:1836500|1836824 hsa-miR-1184 1 0 1
chr11:1836500|1836824 hsa-miR-331-3p 0 0 1
chr11:1836500|1836824 hsa-miR-1207-5p 0 1 1
chr11:1836500|1836824 hsa-miR-1233 0 0 1
chr11:1836500|1836824 hsa-miR-103 0 0 1
chr11:1836500|1836824 hsa-miR-138 0 0 1
chr11:1836500|1836824 hsa-miR-1285 0 0 1
chr11:1836500|1836824 hsa-miR-218 0 0 1
chr11:1836500|1836824 hsa-miR-516b 0 0 1
chr11:1836500|1836824 hsa-miR-1201 0 0 1
chr11:1836500|1836824 hsa-miR-596 1 0 0
chr11:1836500|1836824 hsa-miR-638 1 0 0
chr11:1836500|1836824 hsa-miR-762 1 0 0
chr11:1836500|1836824 hsa-miR-940 0 1 0
chr11:1836500|1836824 hsa-miR-1538 1 0 0
chr11:1836500|1836824 hsa-miR-3137 1 1 0
chr11:1836500|1836824 hsa-miR-3181 1 0 0
chr11:1836500|1836824 hsa-miR-4300 0 1 0
chr11:1836500|1836824 hsa-miR-4487 0 1 0
chr11:1836500|1836824 hsa-miR-4498 0 1 0
chr11:1836500|1836824 hsa-miR-4522 0 1 0
chr11:1836500|1836824 hsa-miR-4663 1 0 0
chr11:1836500|1836824 hsa-miR-4686 1 1 0
chr11:1836500|1836824 hsa-miR-4710 0 1 0
chr11:1836500|1836824 hsa-miR-4734 1 0 0
chr11:1836500|1836824 hsa-miR-4741 1 0 0
chr11:1836500|1836824 hsa-miR-4752 0 1 0
chr11:1836500|1836824 hsa-miR-6081 1 0 0
chr11:1836500|1836824 hsa-miR-7974 1 1 0
chr11:1836500|1836824 hsa-miR-8089 1 0 0
chr11:1836500|1836824 hsa-miR-18a-3p 0 1 0
chr11:1836500|1836824 hsa-miR-668-3p 1 0 0
chr11:1836500|1836824 hsa-miR-4665-3p 1 0 0
chr11:1836500|1836824 hsa-miR-1972 0 1 0
chr11:1836500|1836824 hsa-miR-1233-3p 1 0 0
chr11:1836500|1836824 hsa-miR-6854-5p 0 1 0
chr11:1836500|1836824 hsa-miR-6799-5p 1 0 0
chr11:1836500|1836824 hsa-miR-3692-5p 0 1 0
chr11:1836500|1836824 hsa-miR-7114-5p 1 0 0
chr11:1836500|1836824 hsa-miR-7110-3p 0 1 0
chr11:1836500|1836824 hsa-miR-185-3p 1 1 0
chr11:1836500|1836824 hsa-miR-6874-5p 1 0 0
chr11:1836500|1836824 hsa-miR-3934-3p 0 1 0
chr11:1836500|1836824 hsa-miR-1229-5p 1 0 0
chr11:1836500|1836824 hsa-miR-4640-5p 1 0 0
chr11:1836500|1836824 hsa-miR-767-5p 1 0 0
chr11:1836500|1836824 hsa-miR-4783-5p 1 0 0
chr11:1836500|1836824 hsa-miR-103a-3p 0 1 0
chr11:1836500|1836824 hsa-miR-4446-3p 1 1 0
chr11:1836500|1836824 hsa-miR-4733-3p 0 1 0
chr11:1836500|1836824 hsa-miR-6742-3p 0 1 0
chr11:1836500|1836824 hsa-miR-7156-3p 1 0 0
chr11:1836500|1836824 hsa-miR-7843-3p 0 1 0
chr11:1836500|1836824 hsa-miR-6769a-3p 0 1 0
chr11:1836500|1836824 hsa-miR-3678-3p 0 1 0
chr11:1836500|1836824 hsa-miR-1225-5p 1 0 0
chr11:1836500|1836824 hsa-miR-106b-3p 1 0 0
chr11:1836500|1836824 hsa-miR-4746-3p 1 0 0
chr11:1836500|1836824 hsa-miR-6814-5p 0 1 0
chr11:1836500|1836824 hsa-miR-6868-5p 0 1 0
chr11:1836500|1836824 hsa-miR-4749-3p 0 1 0
chr11:1836500|1836824 hsa-miR-4717-5p 0 1 0
chr11:1836500|1836824 hsa-miR-3157-3p 0 1 0
chr11:1836500|1836824 hsa-miR-5699-5p 0 1 0
chr11:1836500|1836824 hsa-miR-4763-3p 0 1 0
chr11:1836500|1836824 hsa-miR-1343-5p 1 0 0
chr11:1836500|1836824 hsa-miR-6726-5p 0 1 0
chr11:1836500|1836824 hsa-miR-320a-5p 0 1 0
chr11:1836500|1836824 hsa-miR-5189-5p 0 1 0
chr11:1836500|1836824 hsa-miR-328-5p 1 0 0
chr11:1836500|1836824 hsa-miR-6735-5p 0 1 0
chr11:1836500|1836824 hsa-miR-6777-5p 1 0 0
chr11:1836500|1836824 hsa-miR-6848-5p 1 0 0
chr11:1836500|1836824 hsa-miR-6889-5p 1 1 0
chr11:1836500|1836824 hsa-miR-3187-5p 1 1 0
chr11:1836500|1836824 hsa-miR-10394-3p 1 0 0
chr11:1836500|1836824 hsa-miR-1266-5p 1 0 0
chr11:1836500|1836824 hsa-miR-6511a-5p 0 1 0
chr11:1836500|1836824 hsa-miR-6731-5p 1 0 0
chr11:1836500|1836824 hsa-miR-1199-5p 1 1 0
chr11:1836500|1836824 hsa-miR-5008-3p 1 0 0
chr11:1836500|1836824 hsa-miR-6736-5p 0 1 0
chr11:1836500|1836824 hsa-miR-6724-5p 1 1 0
chr11:1836500|1836824 hsa-miR-6791-5p 1 0 0
chr11:1836500|1836824 hsa-miR-6893-3p 0 1 0
chr11:1836500|1836824 hsa-miR-9851-5p 0 1 0
chr11:1836500|1836824 hsa-miR-6775-3p 0 1 0
chr11:1836500|1836824 hsa-miR-6751-3p 1 0 0
chr11:1836500|1836824 hsa-miR-6823-3p 1 0 0
chr11:1836500|1836824 hsa-miR-10394-5p 1 0 0
chr11:1836500|1836824 hsa-miR-4690-3p 0 1 0
chr11:1836500|1836824 hsa-miR-6833-3p 0 1 0
chr11:1836500|1836824 hsa-miR-6737-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:1836500|1836824
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MLGLWAARGASAREGDSGRVGAQTPENAAHQACLSDGP
Nucleotide Sequence CTGCTCGGGCTGTGGGCAGCAAGAGGGGCTTCAGCCCGGGAGGGTGATTCTGGCCGAGTTGGGGCTCAGACCCCCGAAAATGCTGCCCATCAGGCCTGTCTTTCCGATGGCCCATAG
CircID chr11:1836500|1836824
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MGCGLVTSTSPEWQPAGPAGTSAPEHAADPRCPVADGAHPG
Nucleotide Sequence TTGGGCTGTGGCCTGGTGACCAGCACCTCACCTGAGTGGCAGCCGGCGGGCCCAGCAGGTACCAGTGCTCCAGAACATGCTGCAGATCCACGGTGCCCAGTGGCAGACGGAGCTCACCCAGGG
CircID chr11:1836500|1836824
ORF Type ORF3
Protein Length 65
Nucleotide Length 198
Protein Sequence MGTYRREKHSSPTCSGCGQQEGLQPGRVILAELGLRPPKMLPIRPVFPMAHRAGSLPALPWAVAW
Nucleotide Sequence CTGGGCACGTACCGGAGAGAGAAGCACAGCTCCCCGACCTGCTCGGGCTGTGGGCAGCAAGAGGGGCTTCAGCCCGGGAGGGTGATTCTGGCCGAGTTGGGGCTCAGACCCCCGAAAATGCTGCCCATCAGGCCTGTCTTTCCGATGGCCCATAGGGCAGGGTCCCTGCCAGCTCTGCCTTGGGCTGTGGCCTGGTGA
CircID chr11:1836500|1836824
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MSGSRRAQQVPVLQNMLQIHGAQWQTELTQG
Nucleotide Sequence CTGAGTGGCAGCCGGCGGGCCCAGCAGGTACCAGTGCTCCAGAACATGCTGCAGATCCACGGTGCCCAGTGGCAGACGGAGCTCACCCAGGGG
CircID chr11:1836500|1836824
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MSWARTGERSTAPRPARAVGSKRGFSPGG
Nucleotide Sequence CTGAGCTGGGCACGTACCGGAGAGAGAAGCACAGCTCCCCGACCTGCTCGGGCTGTGGGCAGCAAGAGGGGCTTCAGCCCGGGAGGGTGA
CircID chr11:1836500|1836824
ORF Type ORF6
Protein Length 26
Nucleotide Length 81
Protein Sequence MSFRWPIGQGPCQLCLGLWPGDQHLT
Nucleotide Sequence CTGTCTTTCCGATGGCCCATAGGGCAGGGTCCCTGCCAGCTCTGCCTTGGGCTGTGGCCTGGTGACCAGCACCTCACCTGA
CircID chr11:1836500|1836824
ORF Type ORF7
Protein Length 107
Nucleotide Length 321
Protein Sequence MGELRLPLGTVDLQHVLEHWYLLGPPAATQVRCWSPGHSPRQSWQGPCPMGHRKDRPDGQHFRGSEPQLGQNHPPGLKPLLLPTARAGRGAVLLSPVRAQLRPADRG
Nucleotide Sequence CTGGGTGAGCTCCGTCTGCCACTGGGCACCGTGGATCTGCAGCATGTTCTGGAGCACTGGTACCTGCTGGGCCCGCCGGCTGCCACTCAGGTGAGGTGCTGGTCACCAGGCCACAGCCCAAGGCAGAGCTGGCAGGGACCCTGCCCTATGGGCCATCGGAAAGACAGGCCTGATGGGCAGCATTTTCGGGGGTCTGAGCCCCAACTCGGCCAGAATCACCCTCCCGGGCTGAAGCCCCTCTTGCTGCCCACAGCCCGAGCAGGTCGGGGAGCTGTGCTTCTCTCTCCGGTACGTGCCCAGCTCAGGCCGGCTGACCGTGGT
CircID chr11:1836500|1836824
ORF Type ORF8
Protein Length 38
Nucleotide Length 117
Protein Sequence MVPAGPAGCHSGEVLVTRPQPKAELAGTLPYGPSERQA
Nucleotide Sequence CTGGTACCTGCTGGGCCCGCCGGCTGCCACTCAGGTGAGGTGCTGGTCACCAGGCCACAGCCCAAGGCAGAGCTGGCAGGGACCCTGCCCTATGGGCCATCGGAAAGACAGGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab