CircRNA Information

General Information
circRNA Basic Information
CircID chr11:1883419|1883560
Strand +
CircType exon
Host Gene ENSG00000130592.12;
Algorism CIRI2;
Sequence CTCCTCCTGTTCCTCCTCAGCCCCTGCGGCCCCCAGGTTGTCCTGGACAGTGTCCTCTGGGCCTGGCCCCTCCTTGCTCAGACTCAACTCCTCCAGGTGGACTTCATCACTGTCCTCCTTTTCGTAGGCATGCAGGCCGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:1883419|1883560 hsa-miR-198 0 0 1
chr11:1883419|1883560 hsa-miR-619-5p 0 0 1
chr11:1883419|1883560 hsa-miR-619-3p 0 0 1
chr11:1883419|1883560 hsa-miR-627-5p 0 0 1
chr11:1883419|1883560 hsa-miR-627-3p 0 0 1
chr11:1883419|1883560 hsa-miR-637 1 1 1
chr11:1883419|1883560 hsa-miR-765 0 1 1
chr11:1883419|1883560 hsa-miR-665 0 0 1
chr11:1883419|1883560 hsa-miR-924 0 0 1
chr11:1883419|1883560 hsa-miR-1234-3p 0 0 1
chr11:1883419|1883560 hsa-miR-1197 0 0 1
chr11:1883419|1883560 hsa-miR-1234 0 0 1
chr11:1883419|1883560 hsa-miR-490-3p 0 1 1
chr11:1883419|1883560 hsa-miR-423-5p 0 1 1
chr11:1883419|1883560 hsa-miR-219-1-3p 0 0 1
chr11:1883419|1883560 hsa-miR-604 1 0 0
chr11:1883419|1883560 hsa-miR-638 1 0 0
chr11:1883419|1883560 hsa-miR-762 1 0 0
chr11:1883419|1883560 hsa-miR-920 1 0 0
chr11:1883419|1883560 hsa-miR-1538 0 1 0
chr11:1883419|1883560 hsa-miR-3132 1 0 0
chr11:1883419|1883560 hsa-miR-3196 1 0 0
chr11:1883419|1883560 hsa-miR-4259 1 0 0
chr11:1883419|1883560 hsa-miR-3652 1 0 0
chr11:1883419|1883560 hsa-miR-4430 1 0 0
chr11:1883419|1883560 hsa-miR-4478 1 0 0
chr11:1883419|1883560 hsa-miR-4488 1 0 0
chr11:1883419|1883560 hsa-miR-4489 1 0 0
chr11:1883419|1883560 hsa-miR-4498 1 0 0
chr11:1883419|1883560 hsa-miR-4505 1 0 0
chr11:1883419|1883560 hsa-miR-4508 1 0 0
chr11:1883419|1883560 hsa-miR-3960 1 0 0
chr11:1883419|1883560 hsa-miR-4651 1 0 0
chr11:1883419|1883560 hsa-miR-4656 1 1 0
chr11:1883419|1883560 hsa-miR-4675 1 0 0
chr11:1883419|1883560 hsa-miR-4688 1 0 0
chr11:1883419|1883560 hsa-miR-4689 0 1 0
chr11:1883419|1883560 hsa-miR-4734 1 0 0
chr11:1883419|1883560 hsa-miR-4739 1 0 0
chr11:1883419|1883560 hsa-miR-4741 1 0 0
chr11:1883419|1883560 hsa-miR-5194 1 0 0
chr11:1883419|1883560 hsa-miR-5787 1 0 0
chr11:1883419|1883560 hsa-miR-6075 0 1 0
chr11:1883419|1883560 hsa-miR-6081 1 0 0
chr11:1883419|1883560 hsa-miR-6085 1 1 0
chr11:1883419|1883560 hsa-miR-6127 1 0 0
chr11:1883419|1883560 hsa-miR-6132 1 0 0
chr11:1883419|1883560 hsa-miR-8089 1 0 0
chr11:1883419|1883560 hsa-miR-12118 0 1 0
chr11:1883419|1883560 hsa-miR-4433b-3p 1 0 0
chr11:1883419|1883560 hsa-miR-128-1-5p 1 1 0
chr11:1883419|1883560 hsa-miR-4731-5p 1 1 0
chr11:1883419|1883560 hsa-miR-6825-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6894-5p 1 0 0
chr11:1883419|1883560 hsa-miR-219a-1-3p 1 1 0
chr11:1883419|1883560 hsa-miR-6510-5p 1 0 0
chr11:1883419|1883560 hsa-miR-766-5p 0 1 0
chr11:1883419|1883560 hsa-miR-7851-3p 0 1 0
chr11:1883419|1883560 hsa-miR-6089 1 0 0
chr11:1883419|1883560 hsa-miR-7847-3p 1 0 0
chr11:1883419|1883560 hsa-miR-4653-3p 1 0 0
chr11:1883419|1883560 hsa-miR-7154-3p 0 1 0
chr11:1883419|1883560 hsa-miR-4755-3p 0 1 0
chr11:1883419|1883560 hsa-miR-6721-5p 1 0 0
chr11:1883419|1883560 hsa-miR-197-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6776-5p 1 0 0
chr11:1883419|1883560 hsa-miR-3180-3p 1 0 0
chr11:1883419|1883560 hsa-miR-6829-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6798-5p 1 0 0
chr11:1883419|1883560 hsa-miR-2467-3p 1 0 0
chr11:1883419|1883560 hsa-miR-6782-5p 1 0 0
chr11:1883419|1883560 hsa-miR-1343-3p 1 0 0
chr11:1883419|1883560 hsa-miR-6852-5p 0 1 0
chr11:1883419|1883560 hsa-miR-6835-5p 1 0 0
chr11:1883419|1883560 hsa-miR-1226-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6784-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6753-5p 1 0 0
chr11:1883419|1883560 hsa-miR-885-3p 1 0 0
chr11:1883419|1883560 hsa-miR-6771-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6847-5p 0 1 0
chr11:1883419|1883560 hsa-miR-3648 1 0 0
chr11:1883419|1883560 hsa-miR-937-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6824-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6789-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6886-5p 1 1 0
chr11:1883419|1883560 hsa-miR-6781-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6877-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6895-5p 1 1 0
chr11:1883419|1883560 hsa-miR-664b-5p 1 0 0
chr11:1883419|1883560 hsa-miR-2277-5p 1 0 0
chr11:1883419|1883560 hsa-miR-5004-5p 0 1 0
chr11:1883419|1883560 hsa-miR-10400-5p 1 0 0
chr11:1883419|1883560 hsa-miR-4763-3p 1 1 0
chr11:1883419|1883560 hsa-miR-6787-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6870-5p 1 0 0
chr11:1883419|1883560 hsa-miR-3180 1 0 0
chr11:1883419|1883560 hsa-miR-5001-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6726-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6743-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6752-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6754-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6756-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6803-5p 1 1 0
chr11:1883419|1883560 hsa-miR-6813-5p 1 1 0
chr11:1883419|1883560 hsa-miR-7107-5p 1 0 0
chr11:1883419|1883560 hsa-miR-11181-3p 1 0 0
chr11:1883419|1883560 hsa-miR-6722-3p 1 1 0
chr11:1883419|1883560 hsa-miR-6779-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6797-5p 1 0 0
chr11:1883419|1883560 hsa-miR-7111-5p 1 0 0
chr11:1883419|1883560 hsa-miR-1909-3p 1 1 0
chr11:1883419|1883560 hsa-miR-328-5p 1 1 0
chr11:1883419|1883560 hsa-miR-4726-5p 0 1 0
chr11:1883419|1883560 hsa-miR-6738-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6777-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6794-5p 0 1 0
chr11:1883419|1883560 hsa-miR-6795-5p 1 1 0
chr11:1883419|1883560 hsa-miR-6846-5p 1 1 0
chr11:1883419|1883560 hsa-miR-6848-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6858-5p 0 1 0
chr11:1883419|1883560 hsa-miR-6889-5p 1 0 0
chr11:1883419|1883560 hsa-miR-4436b-3p 0 1 0
chr11:1883419|1883560 hsa-miR-4697-5p 1 0 0
chr11:1883419|1883560 hsa-miR-4723-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6845-5p 1 1 0
chr11:1883419|1883560 hsa-miR-939-5p 1 0 0
chr11:1883419|1883560 hsa-miR-3198 1 0 0
chr11:1883419|1883560 hsa-miR-4665-5p 1 0 0
chr11:1883419|1883560 hsa-miR-3173-3p 0 1 0
chr11:1883419|1883560 hsa-miR-6891-5p 0 1 0
chr11:1883419|1883560 hsa-miR-4667-5p 1 1 0
chr11:1883419|1883560 hsa-miR-3184-5p 0 1 0
chr11:1883419|1883560 hsa-miR-6790-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6791-5p 1 0 0
chr11:1883419|1883560 hsa-miR-6762-5p 1 1 0
chr11:1883419|1883560 hsa-miR-128-2-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:1883419|1883560
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MFLLSPCGPQVVLDSVLWAWPLLAQTQLLQVDFITVLLFVGMQAG
Nucleotide Sequence CTGTTCCTCCTCAGCCCCTGCGGCCCCCAGGTTGTCCTGGACAGTGTCCTCTGGGCCTGGCCCCTCCTTGCTCAGACTCAACTCCTCCAGGTGGACTTCATCACTGTCCTCCTTTTCGTAGGCATGCAGGCCGGG
CircID chr11:1883419|1883560
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MSWTVSSGPGPSLLRLNSSRWTSSLSSFS
Nucleotide Sequence TTGTCCTGGACAGTGTCCTCTGGGCCTGGCCCCTCCTTGCTCAGACTCAACTCCTCCAGGTGGACTTCATCACTGTCCTCCTTTTCGTAG
CircID chr11:1883419|1883560
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MRPPGCPGQCPLGLAPPCSDSTPPGGLHHCPPFRRHAGR
Nucleotide Sequence CTGCGGCCCCCAGGTTGTCCTGGACAGTGTCCTCTGGGCCTGGCCCCTCCTTGCTCAGACTCAACTCCTCCAGGTGGACTTCATCACTGTCCTCCTTTTCGTAGGCATGCAGGCCGG
CircID chr11:1883419|1883560
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE
Nucleotide Sequence CTGCATGCCTACGAAAAGGAGGACAGTGATGAAGTCCACCTGGAGGAGTTGAGTCTGAGCAAGGAGGGGCCAGGCCCAGAGGACACTGTCCAGGACAACCTGGGGGCCGCAGGGGCTGAGGAGGAACAGGAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab