CircRNA Information

General Information
circRNA Basic Information
CircID chr11:1915081|1915478
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGGGATGTTTCTCTGTGTCTGTGTGTTTTGTGGGGTCACACACCTGGGATGATGTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGGGGCCACACAACTGGGATGATGTTTCTCTGTGTGTGTGTGTGTCTTGTGGGGTGTACACACTTAGGGATGATATTGCTATGTGTGTGTGTTCTGGGATCACATCCCTGGGGATGATGTTATTCTCTGTGTGTGTGTTGTGGGATAGGACATCTGAGATGATGTTTCTGTATGTGTGTGTCTGTGTGTTGTGGGGTCACACACGTGGGATGATGTTTCTGTGTGTGTGTGTCTGTGTGTGTATGTTGTGCGGTCACGCACCTGGGATGATGTTTCTGCGTGTGTGTGTATGTGTTGTGGGGTCACACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:1915081|1915478 hsa-miR-494-5p 0 0 1
chr11:1915081|1915478 hsa-miR-494-3p 0 0 1
chr11:1915081|1915478 hsa-miR-595 0 0 1
chr11:1915081|1915478 hsa-miR-603 0 0 1
chr11:1915081|1915478 hsa-miR-662 0 1 1
chr11:1915081|1915478 hsa-miR-663b 0 0 1
chr11:1915081|1915478 hsa-miR-188-3p 0 0 1
chr11:1915081|1915478 hsa-miR-362-3p 0 0 1
chr11:1915081|1915478 hsa-miR-644 0 0 1
chr11:1915081|1915478 hsa-miR-329 0 0 1
chr11:1915081|1915478 hsa-miR-147 0 0 1
chr11:1915081|1915478 hsa-miR-466 1 1 0
chr11:1915081|1915478 hsa-miR-4269 1 1 0
chr11:1915081|1915478 hsa-miR-3941 0 1 0
chr11:1915081|1915478 hsa-miR-4462 1 0 0
chr11:1915081|1915478 hsa-miR-8485 1 1 0
chr11:1915081|1915478 hsa-miR-4726-3p 0 1 0
chr11:1915081|1915478 hsa-miR-187-5p 1 0 0
chr11:1915081|1915478 hsa-miR-6757-5p 0 1 0
chr11:1915081|1915478 hsa-miR-874-5p 1 1 0
chr11:1915081|1915478 hsa-miR-1247-5p 1 0 0
chr11:1915081|1915478 hsa-miR-585-5p 1 1 0
chr11:1915081|1915478 hsa-miR-330-3p 1 1 0
chr11:1915081|1915478 hsa-miR-508-5p 1 0 0
chr11:1915081|1915478 hsa-miR-361-3p 0 1 0
chr11:1915081|1915478 hsa-miR-6818-5p 0 1 0
chr11:1915081|1915478 hsa-miR-3151-3p 0 1 0
chr11:1915081|1915478 hsa-miR-3200-5p 1 0 0
chr11:1915081|1915478 hsa-miR-6767-5p 1 1 0
chr11:1915081|1915478 hsa-miR-7152-5p 1 0 0
chr11:1915081|1915478 hsa-miR-3177-5p 0 1 0
chr11:1915081|1915478 hsa-miR-219b-5p 0 1 0
chr11:1915081|1915478 hsa-miR-5587-3p 0 1 0
chr11:1915081|1915478 hsa-miR-5003-5p 0 1 0
chr11:1915081|1915478 hsa-miR-6808-3p 0 1 0
chr11:1915081|1915478 hsa-miR-642b-3p 0 1 0
chr11:1915081|1915478 hsa-miR-6859-5p 0 1 0
chr11:1915081|1915478 hsa-miR-6764-5p 0 1 0
chr11:1915081|1915478 hsa-miR-342-3p 1 1 0
chr11:1915081|1915478 hsa-miR-1912-3p 0 1 0
chr11:1915081|1915478 hsa-miR-4789-3p 0 1 0
chr11:1915081|1915478 hsa-miR-376c-3p 0 1 0
chr11:1915081|1915478 hsa-miR-7973 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:1915081|1915478
ORF Type ORF1
Protein Length 132
Nucleotide Length 396
Protein Sequence LGCFSVSVCFVGSHTWDDVSVCVCVCVCVLGPHNWDDVSLCVCVSCGVYTLRDDIAMCVCSGITSLGMMLFSVCVLWDRTSEMMFLYVCVCVLWGHTRGMMFLCVCVCVCMLCGHAPGMMFLRVCVCVVGSH
Nucleotide Sequence CTGGGATGTTTCTCTGTGTCTGTGTGTTTTGTGGGGTCACACACCTGGGATGATGTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGGGGCCACACAACTGGGATGATGTTTCTCTGTGTGTGTGTGTGTCTTGTGGGGTGTACACACTTAGGGATGATATTGCTATGTGTGTGTGTTCTGGGATCACATCCCTGGGGATGATGTTATTCTCTGTGTGTGTGTTGTGGGATAGGACATCTGAGATGATGTTTCTGTATGTGTGTGTCTGTGTGTTGTGGGGTCACACACGTGGGATGATGTTTCTGTGTGTGTGTGTCTGTGTGTGTATGTTGTGCGGTCACGCACCTGGGATGATGTTTCTGCGTGTGTGTGTATGTGTTGTGGGGTCACAC

CircID chr11:1915081|1915478
ORF Type ORF2
Protein Length 63
Nucleotide Length 192
Protein Sequence MCLCVLWGHTPGMMFLCVCVCVCVFWGHTTGMMFLCVCVCLVGCTHLGMILLCVCVLGSHPWG
Nucleotide Sequence CTGTGTCTGTGTGTTTTGTGGGGTCACACACCTGGGATGATGTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGGGGCCACACAACTGGGATGATGTTTCTCTGTGTGTGTGTGTGTCTTGTGGGGTGTACACACTTAGGGATGATATTGCTATGTGTGTGTGTTCTGGGATCACATCCCTGGGGATGA

CircID chr11:1915081|1915478
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MCVVGSHTWDDVSVCVCLCVYVVRSRTWDDVSACVCMCCGVTH
Nucleotide Sequence CTGTGTGTTGTGGGGTCACACACGTGGGATGATGTTTCTGTGTGTGTGTGTCTGTGTGTGTATGTTGTGCGGTCACGCACCTGGGATGATGTTTCTGCGTGTGTGTGTATGTGTTGTGGGGTCACACAC

CircID chr11:1915081|1915478
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MCGPRTHTHTHTHTETSSQVCDPTKHTDTEKHP
Nucleotide Sequence TTGTGTGGCCCCAGAACACACACACACACACACACACACACAGAAACATCATCCCAGGTGTGTGACCCCACAAAACACACAGACACAGAGAAACATCCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites