CircRNA Information

General Information
circRNA Basic Information
CircID chr11:19934011|19934257
Strand +
CircType exon
Host Gene ENSG00000166833.18;
Algorism CIRI2;
Sequence CGTGGCAGTGTTGGGATGGTTGTATTGCTGCTGGGGCTGAGGTAGCTGAACACTGACGGTATTGCTTCCTGTGGTCTGGGTGGTCCCGACAGACCCACTGACAGTCTGGCTGCTGATGCTGTGGTTCAGGGTGGTCCCTCCTGGGCCTTTTCCTTCTGAGGACGCCAGGCTGGAAGAGGAACTGGAGTGTCTGCCGTCCAGCTGGGGCTTCTGCTGGGGGAGTCCTGAGCTCAGCTTCCCACTCCGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:19934011|19934257 hsa-miR-15a-5p 0 0 1
chr11:19934011|19934257 hsa-miR-15a-3p 0 0 1
chr11:19934011|19934257 hsa-miR-214-5p 0 0 1
chr11:19934011|19934257 hsa-miR-214-3p 0 0 1
chr11:19934011|19934257 hsa-miR-223-5p 0 0 1
chr11:19934011|19934257 hsa-miR-223-3p 0 0 1
chr11:19934011|19934257 hsa-miR-15b-5p 0 0 1
chr11:19934011|19934257 hsa-miR-15b-3p 0 0 1
chr11:19934011|19934257 hsa-miR-141-5p 0 0 1
chr11:19934011|19934257 hsa-miR-141-3p 0 0 1
chr11:19934011|19934257 hsa-miR-184 0 0 1
chr11:19934011|19934257 hsa-miR-195-5p 0 0 1
chr11:19934011|19934257 hsa-miR-195-3p 0 0 1
chr11:19934011|19934257 hsa-miR-200a-5p 0 0 1
chr11:19934011|19934257 hsa-miR-200a-3p 0 0 1
chr11:19934011|19934257 hsa-miR-424-5p 0 0 1
chr11:19934011|19934257 hsa-miR-424-3p 0 0 1
chr11:19934011|19934257 hsa-miR-497-5p 0 0 1
chr11:19934011|19934257 hsa-miR-497-3p 0 0 1
chr11:19934011|19934257 hsa-miR-298 0 0 1
chr11:19934011|19934257 hsa-miR-665 0 0 1
chr11:19934011|19934257 hsa-miR-922 0 0 1
chr11:19934011|19934257 hsa-miR-1236-5p 0 0 1
chr11:19934011|19934257 hsa-miR-1236-3p 0 0 1
chr11:19934011|19934257 hsa-miR-1252-5p 0 0 1
chr11:19934011|19934257 hsa-miR-1252-3p 0 0 1
chr11:19934011|19934257 hsa-miR-145-5p 0 0 1
chr11:19934011|19934257 hsa-miR-193a-5p 0 0 1
chr11:19934011|19934257 hsa-miR-508-5p 0 0 1
chr11:19934011|19934257 hsa-miR-361-3p 0 0 1
chr11:19934011|19934257 hsa-miR-1207-3p 0 0 1
chr11:19934011|19934257 hsa-miR-140-3p 0 1 1
chr11:19934011|19934257 hsa-miR-16 0 0 1
chr11:19934011|19934257 hsa-miR-608 1 0 0
chr11:19934011|19934257 hsa-miR-3153 0 1 0
chr11:19934011|19934257 hsa-miR-4323 0 1 0
chr11:19934011|19934257 hsa-miR-4255 0 1 0
chr11:19934011|19934257 hsa-miR-4326 0 1 0
chr11:19934011|19934257 hsa-miR-4478 0 1 0
chr11:19934011|19934257 hsa-miR-4494 0 1 0
chr11:19934011|19934257 hsa-miR-4530 0 1 0
chr11:19934011|19934257 hsa-miR-4651 1 0 0
chr11:19934011|19934257 hsa-miR-4663 1 1 0
chr11:19934011|19934257 hsa-miR-5690 0 1 0
chr11:19934011|19934257 hsa-miR-6075 1 0 0
chr11:19934011|19934257 hsa-miR-6124 0 1 0
chr11:19934011|19934257 hsa-miR-4433b-3p 1 0 0
chr11:19934011|19934257 hsa-miR-500b-3p 0 1 0
chr11:19934011|19934257 hsa-miR-4700-3p 1 0 0
chr11:19934011|19934257 hsa-miR-4665-3p 1 0 0
chr11:19934011|19934257 hsa-miR-6720-5p 1 0 0
chr11:19934011|19934257 hsa-miR-766-3p 1 0 0
chr11:19934011|19934257 hsa-miR-6881-3p 0 1 0
chr11:19934011|19934257 hsa-miR-6875-3p 0 1 0
chr11:19934011|19934257 hsa-miR-6849-3p 0 1 0
chr11:19934011|19934257 hsa-miR-4711-5p 0 1 0
chr11:19934011|19934257 hsa-miR-4697-3p 0 1 0
chr11:19934011|19934257 hsa-miR-6782-5p 1 0 0
chr11:19934011|19934257 hsa-miR-4733-5p 0 1 0
chr11:19934011|19934257 hsa-miR-345-3p 0 1 0
chr11:19934011|19934257 hsa-miR-3934-3p 0 1 0
chr11:19934011|19934257 hsa-miR-4793-5p 0 1 0
chr11:19934011|19934257 hsa-miR-3690 0 1 0
chr11:19934011|19934257 hsa-miR-3925-3p 0 1 0
chr11:19934011|19934257 hsa-miR-199a-5p 1 1 0
chr11:19934011|19934257 hsa-miR-194-3p 0 1 0
chr11:19934011|19934257 hsa-miR-584-3p 0 1 0
chr11:19934011|19934257 hsa-miR-3619-3p 1 1 0
chr11:19934011|19934257 hsa-miR-4727-3p 1 1 0
chr11:19934011|19934257 hsa-miR-875-5p 0 1 0
chr11:19934011|19934257 hsa-miR-3670 0 1 0
chr11:19934011|19934257 hsa-miR-3664-3p 0 1 0
chr11:19934011|19934257 hsa-miR-3620-3p 0 1 0
chr11:19934011|19934257 hsa-miR-3617-3p 0 1 0
chr11:19934011|19934257 hsa-miR-199b-5p 0 1 0
chr11:19934011|19934257 hsa-miR-1233-5p 1 0 0
chr11:19934011|19934257 hsa-miR-6816-5p 1 0 0
chr11:19934011|19934257 hsa-miR-1343-5p 1 0 0
chr11:19934011|19934257 hsa-miR-6756-5p 1 0 0
chr11:19934011|19934257 hsa-miR-1249-5p 0 1 0
chr11:19934011|19934257 hsa-miR-6797-5p 0 1 0
chr11:19934011|19934257 hsa-miR-4745-5p 1 1 0
chr11:19934011|19934257 hsa-miR-939-5p 1 1 0
chr11:19934011|19934257 hsa-miR-1238-5p 1 0 0
chr11:19934011|19934257 hsa-miR-4758-5p 1 0 0
chr11:19934011|19934257 hsa-miR-4646-5p 1 1 0
chr11:19934011|19934257 hsa-miR-6766-5p 0 1 0
chr11:19934011|19934257 hsa-miR-6753-3p 0 1 0
chr11:19934011|19934257 hsa-miR-6838-5p 0 1 0
chr11:19934011|19934257 hsa-miR-5195-3p 0 1 0
chr11:19934011|19934257 hsa-miR-4524a-5p 0 1 0
chr11:19934011|19934257 hsa-miR-3942-5p 0 1 0
chr11:19934011|19934257 hsa-miR-4524b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:19934011|19934257
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MNTDGIASCGLGGPDRPTDSLAADAVVQGGPSWAFSF
Nucleotide Sequence CTGAACACTGACGGTATTGCTTCCTGTGGTCTGGGTGGTCCCGACAGACCCACTGACAGTCTGGCTGCTGATGCTGTGGTTCAGGGTGGTCCCTCCTGGGCCTTTTCCTTCTGA
CircID chr11:19934011|19934257
ORF Type ORF2
Protein Length 65
Nucleotide Length 195
Protein Sequence MTVLLPVVWVVPTDPLTVWLLMLWFRVVPPGPFPSEDARLEEELECLPSSWGFCWGSPELSFPLR
Nucleotide Sequence CTGACGGTATTGCTTCCTGTGGTCTGGGTGGTCCCGACAGACCCACTGACAGTCTGGCTGCTGATGCTGTGGTTCAGGGTGGTCCCTCCTGGGCCTTTTCCTTCTGAGGACGCCAGGCTGGAAGAGGAACTGGAGTGTCTGCCGTCCAGCTGGGGCTTCTGCTGGGGGAGTCCTGAGCTCAGCTTCCCACTCCGG
CircID chr11:19934011|19934257
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MGLFLLRTPGWKRNWSVCRPAGASAGGVLSSASHS
Nucleotide Sequence CTGGGCCTTTTCCTTCTGAGGACGCCAGGCTGGAAGAGGAACTGGAGTGTCTGCCGTCCAGCTGGGGCTTCTGCTGGGGGAGTCCTGAGCTCAGCTTCCCACTCC
CircID chr11:19934011|19934257
ORF Type ORF4
Protein Length 78
Nucleotide Length 234
Protein Sequence MSSGLPQQKPQLDGRHSSSSSSLASSEGKGPGGTTLNHSISSQTVSGSVGTTQTTGSNTVSVQLPQPQQQYNHPNTAT
Nucleotide Sequence CTGAGCTCAGGACTCCCCCAGCAGAAGCCCCAGCTGGACGGCAGACACTCCAGTTCCTCTTCCAGCCTGGCGTCCTCAGAAGGAAAAGGCCCAGGAGGGACCACCCTGAACCACAGCATCAGCAGCCAGACTGTCAGTGGGTCTGTCGGGACCACCCAGACCACAGGAAGCAATACCGTCAGTGTTCAGCTACCTCAGCCCCAGCAGCAATACAACCATCCCAACACTGCCACG
CircID chr11:19934011|19934257
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MSVGLSGPPRPQEAIPSVFSYLSPSSNTTIPTLP
Nucleotide Sequence CTGTCAGTGGGTCTGTCGGGACCACCCAGACCACAGGAAGCAATACCGTCAGTGTTCAGCTACCTCAGCCCCAGCAGCAATACAACCATCCCAACACTGCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab