CircRNA Information

General Information
circRNA Basic Information
CircID chr11:2129263|2129382
Strand -
CircType exon
Host Gene ENSG00000167244.16;
Algorism CIRI2;
Sequence AGGTGACATTCAGTGTTTGGCGTGGGGGTCTTCAGGTGATGGCAGAGGAGGGGACCCAAGAGGGGGCCCCCCACTGAAGACATTGGGGACACGGGGAGGAGACAAGATGGAGAGCCACGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:2129263|2129382 hsa-miR-141-5p 0 0 1
chr11:2129263|2129382 hsa-miR-141-3p 0 0 1
chr11:2129263|2129382 hsa-miR-136-5p 0 0 1
chr11:2129263|2129382 hsa-miR-136-3p 0 0 1
chr11:2129263|2129382 hsa-miR-200a-5p 0 0 1
chr11:2129263|2129382 hsa-miR-200a-3p 0 0 1
chr11:2129263|2129382 hsa-miR-635 0 0 1
chr11:2129263|2129382 hsa-miR-760 1 0 1
chr11:2129263|2129382 hsa-miR-1204 1 0 1
chr11:2129263|2129382 hsa-miR-296-5p 0 0 1
chr11:2129263|2129382 hsa-miR-6749-3p 1 0 0
chr11:2129263|2129382 hsa-miR-6836-3p 1 0 0
chr11:2129263|2129382 hsa-miR-6822-3p 1 0 0
chr11:2129263|2129382 hsa-miR-6845-3p 1 0 0
chr11:2129263|2129382 hsa-miR-6740-3p 1 0 0
chr11:2129263|2129382 hsa-miR-6763-3p 1 0 0
chr11:2129263|2129382 hsa-miR-4783-3p 1 0 0
chr11:2129263|2129382 hsa-miR-5010-3p 1 0 0
chr11:2129263|2129382 hsa-miR-4667-3p 1 0 0
chr11:2129263|2129382 hsa-miR-490-3p 1 0 0
chr11:2129263|2129382 hsa-miR-1236-3p 1 0 0
chr11:2129263|2129382 hsa-miR-7106-3p 1 0 0
chr11:2129263|2129382 hsa-miR-6741-3p 1 0 0
chr11:2129263|2129382 hsa-miR-3605-3p 1 0 0
chr11:2129263|2129382 hsa-miR-6886-3p 1 0 0
chr11:2129263|2129382 hsa-miR-5088-3p 1 0 0
chr11:2129263|2129382 hsa-miR-4749-3p 1 0 0
chr11:2129263|2129382 hsa-miR-328-3p 1 0 0
chr11:2129263|2129382 hsa-miR-6515-3p 1 0 0
chr11:2129263|2129382 hsa-miR-6812-3p 1 0 0
chr11:2129263|2129382 hsa-miR-10398-5p 1 0 0
chr11:2129263|2129382 hsa-miR-6511a-3p 1 0 0
chr11:2129263|2129382 hsa-miR-10401-3p 1 0 0
chr11:2129263|2129382 hsa-miR-6801-3p 1 0 0
chr11:2129263|2129382 hsa-miR-3622a-3p 1 0 0
chr11:2129263|2129382 hsa-miR-3622b-3p 1 0 0
chr11:2129263|2129382 hsa-miR-494-5p 1 0 0
chr11:2129263|2129382 hsa-miR-135b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:2129263|2129382
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MAWGSSGDGRGGDPRGGPPLKTLGTRGGDKMESH
Nucleotide Sequence TTGGCGTGGGGGTCTTCAGGTGATGGCAGAGGAGGGGACCCAAGAGGGGGCCCCCCACTGAAGACATTGGGGACACGGGGAGGAGACAAGATGGAGAGCCAC

CircID chr11:2129263|2129382
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MSPPRVPNVFSGGPPLGSPPLPSPEDPHAKH
Nucleotide Sequence TTGTCTCCTCCCCGTGTCCCCAATGTCTTCAGTGGGGGGCCCCCTCTTGGGTCCCCTCCTCTGCCATCACCTGAAGACCCCCACGCCAAACACTGA

CircID chr11:2129263|2129382
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MSSVGGPLLGPLLCHHLKTPTPNTECH
Nucleotide Sequence ATGTCTTCAGTGGGGGGCCCCCTCTTGGGTCCCCTCCTCTGCCATCACCTGAAGACCCCCACGCCAAACACTGAATGTCAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites