CircRNA Information

General Information
circRNA Basic Information
CircID chr11:2129263|2129465
Strand -
CircType exon
Host Gene ENSG00000167244.16;
Algorism CIRI2;
Sequence AGGTGACATTCAGTGTTTGGCGTGGGGGTCTTCAGGTGATGGCAGAGGAGGGGACCCAAGAGGGGGCCCCCCACTGAAGACATTGGGGACACGGGGAGGAGACAAGATGGAGAGCCACGACTAGGCACGGAGGTCAGACAGGCAGCCCGGGCCAGGATGGTTAGTGGCCCAGGGGAGAGCTGCAAACCTGGGGACGCAAGGGG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:2129263|2129465 hsa-miR-141-5p 0 0 1
chr11:2129263|2129465 hsa-miR-141-3p 0 0 1
chr11:2129263|2129465 hsa-miR-136-5p 0 0 1
chr11:2129263|2129465 hsa-miR-136-3p 0 0 1
chr11:2129263|2129465 hsa-miR-200a-5p 0 0 1
chr11:2129263|2129465 hsa-miR-200a-3p 0 0 1
chr11:2129263|2129465 hsa-miR-635 0 0 1
chr11:2129263|2129465 hsa-miR-1301-5p 0 0 1
chr11:2129263|2129465 hsa-miR-1301-3p 0 0 1
chr11:2129263|2129465 hsa-miR-760 1 0 1
chr11:2129263|2129465 hsa-miR-1204 1 0 1
chr11:2129263|2129465 hsa-miR-296-5p 0 0 1
chr11:2129263|2129465 hsa-miR-331-3p 1 0 1
chr11:2129263|2129465 hsa-miR-346 1 0 0
chr11:2129263|2129465 hsa-miR-612 1 0 0
chr11:2129263|2129465 hsa-miR-661 1 0 0
chr11:2129263|2129465 hsa-miR-663b 1 0 0
chr11:2129263|2129465 hsa-miR-1538 1 0 0
chr11:2129263|2129465 hsa-miR-4292 1 0 0
chr11:2129263|2129465 hsa-miR-4682 1 0 0
chr11:2129263|2129465 hsa-miR-6749-3p 1 0 0
chr11:2129263|2129465 hsa-miR-4747-3p 1 0 0
chr11:2129263|2129465 hsa-miR-132-5p 1 0 0
chr11:2129263|2129465 hsa-miR-214-5p 1 0 0
chr11:2129263|2129465 hsa-miR-4726-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6836-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6822-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6842-3p 1 0 0
chr11:2129263|2129465 hsa-miR-1915-5p 1 0 0
chr11:2129263|2129465 hsa-miR-6845-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6796-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6882-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6740-3p 1 0 0
chr11:2129263|2129465 hsa-miR-615-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6763-3p 1 0 0
chr11:2129263|2129465 hsa-miR-3944-3p 1 0 0
chr11:2129263|2129465 hsa-miR-4783-3p 1 0 0
chr11:2129263|2129465 hsa-miR-5010-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6514-3p 1 0 0
chr11:2129263|2129465 hsa-miR-7113-3p 1 0 0
chr11:2129263|2129465 hsa-miR-3191-5p 1 0 0
chr11:2129263|2129465 hsa-miR-6501-5p 1 0 0
chr11:2129263|2129465 hsa-miR-4667-3p 1 0 0
chr11:2129263|2129465 hsa-miR-490-3p 1 0 0
chr11:2129263|2129465 hsa-miR-4776-3p 1 0 0
chr11:2129263|2129465 hsa-miR-1236-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6743-3p 1 0 0
chr11:2129263|2129465 hsa-miR-3120-5p 1 0 0
chr11:2129263|2129465 hsa-miR-7106-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6741-3p 1 0 0
chr11:2129263|2129465 hsa-miR-3605-3p 1 0 0
chr11:2129263|2129465 hsa-miR-5088-3p 1 0 0
chr11:2129263|2129465 hsa-miR-4749-3p 1 0 0
chr11:2129263|2129465 hsa-miR-328-3p 1 0 0
chr11:2129263|2129465 hsa-miR-2277-5p 1 0 0
chr11:2129263|2129465 hsa-miR-6515-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6812-3p 1 0 0
chr11:2129263|2129465 hsa-miR-3200-3p 1 0 0
chr11:2129263|2129465 hsa-miR-4685-3p 1 0 0
chr11:2129263|2129465 hsa-miR-3620-5p 1 0 0
chr11:2129263|2129465 hsa-miR-6753-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6511a-3p 1 0 0
chr11:2129263|2129465 hsa-miR-10401-3p 1 0 0
chr11:2129263|2129465 hsa-miR-6801-3p 1 0 0
chr11:2129263|2129465 hsa-miR-11181-5p 1 0 0
chr11:2129263|2129465 hsa-miR-3622a-3p 1 0 0
chr11:2129263|2129465 hsa-miR-4723-3p 1 0 0
chr11:2129263|2129465 hsa-miR-330-5p 1 0 0
chr11:2129263|2129465 hsa-miR-3622b-3p 1 0 0
chr11:2129263|2129465 hsa-miR-494-5p 1 0 0
chr11:2129263|2129465 hsa-miR-135b-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:2129263|2129465
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MAWGSSGDGRGGDPRGGPPLKTLGTRGGDKMESHD
Nucleotide Sequence TTGGCGTGGGGGTCTTCAGGTGATGGCAGAGGAGGGGACCCAAGAGGGGGCCCCCCACTGAAGACATTGGGGACACGGGGAGGAGACAAGATGGAGAGCCACGACTAG
CircID chr11:2129263|2129465
ORF Type ORF2
Protein Length 61
Nucleotide Length 183
Protein Sequence MQLSPGPLTILARAACLTSVPSRGSPSCLLPVSPMSSVGGPLLGPLLCHHLKTPTPNTECH
Nucleotide Sequence TTGCAGCTCTCCCCTGGGCCACTAACCATCCTGGCCCGGGCTGCCTGTCTGACCTCCGTGCCTAGTCGTGGCTCTCCATCTTGTCTCCTCCCCGTGTCCCCAATGTCTTCAGTGGGGGGCCCCCTCTTGGGTCCCCTCCTCTGCCATCACCTGAAGACCCCCACGCCAAACACTGAATGTCAC
CircID chr11:2129263|2129465
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MSPPRVPNVFSGGPPLGSPPLPSPEDPHAKH
Nucleotide Sequence TTGTCTCCTCCCCGTGTCCCCAATGTCTTCAGTGGGGGGCCCCCTCTTGGGTCCCCTCCTCTGCCATCACCTGAAGACCCCCACGCCAAACACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab