CircRNA Information

General Information
circRNA Basic Information
CircID chr11:2130923|2131048
Strand +
CircType exon
Host Gene ENSG00000167244.16;
Algorism CIRI2;
Sequence CTTACTTACTGTGTGTTGGCCCAGCCAGAGTGAGGAAGGAGTTTGGCCACATTGGAGATGGCGGTAGCTGAGCAGACATGCCCCCACGAGTAGCCTGACTCCCTGGTGTGCTCCTGGAAGGAAGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:2130923|2131048 hsa-miR-149-5p 0 0 1
chr11:2130923|2131048 hsa-miR-149-3p 0 0 1
chr11:2130923|2131048 hsa-miR-346 0 0 1
chr11:2130923|2131048 hsa-miR-484 0 0 1
chr11:2130923|2131048 hsa-miR-632 0 0 1
chr11:2130923|2131048 hsa-miR-665 0 0 1
chr11:2130923|2131048 hsa-miR-663b 0 0 1
chr11:2130923|2131048 hsa-miR-654-3p 0 1 1
chr11:2130923|2131048 hsa-miR-767-3p 0 1 1
chr11:2130923|2131048 hsa-miR-515-5p 0 0 1
chr11:2130923|2131048 hsa-miR-637 1 0 0
chr11:2130923|2131048 hsa-miR-4253 0 1 0
chr11:2130923|2131048 hsa-miR-4270 1 1 0
chr11:2130923|2131048 hsa-miR-4288 0 1 0
chr11:2130923|2131048 hsa-miR-4440 1 0 0
chr11:2130923|2131048 hsa-miR-4447 1 1 0
chr11:2130923|2131048 hsa-miR-4488 1 0 0
chr11:2130923|2131048 hsa-miR-4505 0 1 0
chr11:2130923|2131048 hsa-miR-4739 1 0 0
chr11:2130923|2131048 hsa-miR-5690 0 1 0
chr11:2130923|2131048 hsa-miR-668-3p 0 1 0
chr11:2130923|2131048 hsa-miR-6875-3p 0 1 0
chr11:2130923|2131048 hsa-miR-6727-5p 1 0 0
chr11:2130923|2131048 hsa-miR-6787-3p 1 1 0
chr11:2130923|2131048 hsa-miR-4640-5p 1 0 0
chr11:2130923|2131048 hsa-miR-6753-5p 0 1 0
chr11:2130923|2131048 hsa-miR-3667-3p 0 1 0
chr11:2130923|2131048 hsa-miR-3677-3p 1 0 0
chr11:2130923|2131048 hsa-miR-6828-3p 0 1 0
chr11:2130923|2131048 hsa-miR-6746-3p 1 0 0
chr11:2130923|2131048 hsa-miR-7113-5p 0 1 0
chr11:2130923|2131048 hsa-miR-4764-3p 0 1 0
chr11:2130923|2131048 hsa-miR-6754-5p 0 1 0
chr11:2130923|2131048 hsa-miR-6803-5p 1 0 0
chr11:2130923|2131048 hsa-miR-328-5p 1 0 0
chr11:2130923|2131048 hsa-miR-6777-5p 1 1 0
chr11:2130923|2131048 hsa-miR-6885-5p 1 0 0
chr11:2130923|2131048 hsa-miR-4472 0 1 0
chr11:2130923|2131048 hsa-miR-128-2-5p 1 0 0
chr11:2130923|2131048 hsa-miR-6504-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:2130923|2131048
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MLSYRHLQCGQTPSSLWLGQHTVSK
Nucleotide Sequence CTGCTCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCAACACACAGTAAGTAAG

CircID chr11:2130923|2131048
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MSAQLPPSPMWPNSFLTLAGPTHSK
Nucleotide Sequence ATGTCTGCTCAGCTACCGCCATCTCCAATGTGGCCAAACTCCTTCCTCACTCTGGCTGGGCCAACACACAGTAAGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites