CircRNA Information

General Information
circRNA Basic Information
CircID chr11:233399|233526
Strand -
CircType exon
Host Gene ENSG00000142082.13;
Algorism CIRI2;
Sequence CCTCTGGCAGGCTCTGGCCCGAATCAGCTCAGCTACATCCTGCAGGGAAAGCTTCCCCTTGTCACTGCTGCCTCCACTTCCAACAACACTTGAAGCACCCACAGAAAAAGATATGGACCTTCTTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:233399|233526 hsa-miR-26b-5p 0 0 1
chr11:233399|233526 hsa-miR-26b-3p 0 0 1
chr11:233399|233526 hsa-miR-493-5p 0 0 1
chr11:233399|233526 hsa-miR-493-3p 0 0 1
chr11:233399|233526 hsa-miR-558 0 0 1
chr11:233399|233526 hsa-miR-596 0 0 1
chr11:233399|233526 hsa-miR-650 1 1 1
chr11:233399|233526 hsa-miR-1205 0 1 1
chr11:233399|233526 hsa-miR-1286 0 0 1
chr11:233399|233526 hsa-miR-1297 0 0 1
chr11:233399|233526 hsa-miR-1265 0 1 1
chr11:233399|233526 hsa-miR-1827 0 1 1
chr11:233399|233526 hsa-miR-1274a 0 0 1
chr11:233399|233526 hsa-miR-7 0 0 1
chr11:233399|233526 hsa-miR-26a 0 0 1
chr11:233399|233526 hsa-miR-623 1 0 0
chr11:233399|233526 hsa-miR-637 1 0 0
chr11:233399|233526 hsa-miR-1183 1 0 0
chr11:233399|233526 hsa-miR-1268a 1 0 0
chr11:233399|233526 hsa-miR-3185 1 0 0
chr11:233399|233526 hsa-miR-4322 1 0 0
chr11:233399|233526 hsa-miR-3612 0 1 0
chr11:233399|233526 hsa-miR-3714 1 0 0
chr11:233399|233526 hsa-miR-3937 1 0 0
chr11:233399|233526 hsa-miR-1268b 1 0 0
chr11:233399|233526 hsa-miR-4425 1 0 0
chr11:233399|233526 hsa-miR-4465 1 0 0
chr11:233399|233526 hsa-miR-4467 1 0 0
chr11:233399|233526 hsa-miR-4519 0 1 0
chr11:233399|233526 hsa-miR-4525 1 0 0
chr11:233399|233526 hsa-miR-3960 1 0 0
chr11:233399|233526 hsa-miR-4656 1 0 0
chr11:233399|233526 hsa-miR-4688 1 0 0
chr11:233399|233526 hsa-miR-4734 1 0 0
chr11:233399|233526 hsa-miR-5090 1 0 0
chr11:233399|233526 hsa-miR-5190 0 1 0
chr11:233399|233526 hsa-miR-6134 1 0 0
chr11:233399|233526 hsa-miR-12114 1 0 0
chr11:233399|233526 hsa-miR-12115 1 1 0
chr11:233399|233526 hsa-miR-12117 1 1 0
chr11:233399|233526 hsa-miR-4433b-3p 1 0 0
chr11:233399|233526 hsa-miR-504-3p 1 0 0
chr11:233399|233526 hsa-miR-6765-5p 1 0 0
chr11:233399|233526 hsa-miR-671-5p 1 0 0
chr11:233399|233526 hsa-miR-6894-5p 1 0 0
chr11:233399|233526 hsa-miR-6799-5p 1 0 0
chr11:233399|233526 hsa-miR-3934-5p 1 0 0
chr11:233399|233526 hsa-miR-7114-5p 1 0 0
chr11:233399|233526 hsa-miR-6880-5p 1 0 0
chr11:233399|233526 hsa-miR-7847-3p 1 0 0
chr11:233399|233526 hsa-miR-4695-5p 1 0 0
chr11:233399|233526 hsa-miR-4722-5p 1 0 0
chr11:233399|233526 hsa-miR-6741-5p 1 0 0
chr11:233399|233526 hsa-miR-6727-5p 1 0 0
chr11:233399|233526 hsa-miR-6759-5p 1 0 0
chr11:233399|233526 hsa-miR-6776-5p 1 0 0
chr11:233399|233526 hsa-miR-6716-5p 1 0 0
chr11:233399|233526 hsa-miR-6871-5p 1 0 0
chr11:233399|233526 hsa-miR-503-5p 1 0 0
chr11:233399|233526 hsa-miR-6748-5p 1 0 0
chr11:233399|233526 hsa-miR-6772-5p 1 1 0
chr11:233399|233526 hsa-miR-6793-5p 1 0 0
chr11:233399|233526 hsa-miR-6796-5p 1 0 0
chr11:233399|233526 hsa-miR-6760-5p 1 0 0
chr11:233399|233526 hsa-miR-7109-5p 1 0 0
chr11:233399|233526 hsa-miR-1226-5p 1 0 0
chr11:233399|233526 hsa-miR-3944-3p 1 0 0
chr11:233399|233526 hsa-miR-4640-5p 0 1 0
chr11:233399|233526 hsa-miR-885-3p 1 0 0
chr11:233399|233526 hsa-miR-3162-5p 1 0 0
chr11:233399|233526 hsa-miR-10400-5p 1 0 0
chr11:233399|233526 hsa-miR-1233-5p 1 0 0
chr11:233399|233526 hsa-miR-1273h-5p 1 0 0
chr11:233399|233526 hsa-miR-4763-3p 1 0 0
chr11:233399|233526 hsa-miR-6769b-5p 1 0 0
chr11:233399|233526 hsa-miR-6778-5p 1 0 0
chr11:233399|233526 hsa-miR-6893-5p 1 0 0
chr11:233399|233526 hsa-miR-6743-5p 1 0 0
chr11:233399|233526 hsa-miR-6803-5p 1 0 0
chr11:233399|233526 hsa-miR-6851-5p 1 0 0
chr11:233399|233526 hsa-miR-11181-3p 1 0 0
chr11:233399|233526 hsa-miR-6763-5p 1 0 0
chr11:233399|233526 hsa-miR-3620-5p 1 0 0
chr11:233399|233526 hsa-miR-4728-5p 1 0 0
chr11:233399|233526 hsa-miR-6780b-5p 0 1 0
chr11:233399|233526 hsa-miR-328-5p 1 0 0
chr11:233399|233526 hsa-miR-4632-5p 1 0 0
chr11:233399|233526 hsa-miR-4701-3p 1 0 0
chr11:233399|233526 hsa-miR-4726-5p 0 1 0
chr11:233399|233526 hsa-miR-6846-5p 1 0 0
chr11:233399|233526 hsa-miR-939-5p 1 0 0
chr11:233399|233526 hsa-miR-6511a-5p 1 0 0
chr11:233399|233526 hsa-miR-6736-5p 1 0 0
chr11:233399|233526 hsa-miR-4747-5p 1 0 0
chr11:233399|233526 hsa-miR-6849-5p 1 0 0
chr11:233399|233526 hsa-miR-342-5p 1 0 0
chr11:233399|233526 hsa-miR-10394-5p 0 1 0
chr11:233399|233526 hsa-miR-6838-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:233399|233526
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MAGSGPNQLSYILQGKLPLVTAASTSNNT
Nucleotide Sequence CTGGCAGGCTCTGGCCCGAATCAGCTCAGCTACATCCTGCAGGGAAAGCTTCCCCTTGTCACTGCTGCCTCCACTTCCAACAACACTTGA
CircID chr11:233399|233526
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MARISSATSCRESFPLSLLPPLPTTLEAPTEKDMDLLP
Nucleotide Sequence CTGGCCCGAATCAGCTCAGCTACATCCTGCAGGGAAAGCTTCCCCTTGTCACTGCTGCCTCCACTTCCAACAACACTTGAAGCACCCACAGAAAAAGATATGGACCTTCTTCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab