CircRNA Information

General Information
circRNA Basic Information
CircID chr11:2396931|2397233
Strand +
CircType exon
Host Gene ENSG00000110651.10;
Algorism CIRI2;
Sequence AGGACGGGCGGGCTGGGTGGACACAGCCCCCCAAGTTGGCCAAGCTGAGTCTCTGGGCGAGTGGCTCCCAGGAGAGGCCTGGCTGAGCAGGCAGAGCACCCTGGGACCCCAGGGCAGAAGGACCCCTGCCCTCCAGTCCCCAAGACCCAGGCCCGTCTCCACTCATACACGCCACCTACATGTGACGTCAGCCCTGAAAAGGTAACAGGAAAGTTCAGAACAAAAACAAAACCCCAAAAGTAAAAAGGCTACGTGTAGCAGAGTAATACCGGAAACGTTATATACACAGGCGGTGATGGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:2396931|2397233 hsa-miR-221-5p 0 0 1
chr11:2396931|2397233 hsa-miR-221-3p 0 0 1
chr11:2396931|2397233 hsa-miR-222-5p 0 0 1
chr11:2396931|2397233 hsa-miR-222-3p 0 0 1
chr11:2396931|2397233 hsa-miR-375-5p 0 0 1
chr11:2396931|2397233 hsa-miR-375-3p 0 0 1
chr11:2396931|2397233 hsa-miR-410-5p 0 0 1
chr11:2396931|2397233 hsa-miR-410-3p 0 0 1
chr11:2396931|2397233 hsa-miR-588 0 0 1
chr11:2396931|2397233 hsa-miR-635 0 0 1
chr11:2396931|2397233 hsa-miR-661 1 1 1
chr11:2396931|2397233 hsa-miR-874-5p 0 0 1
chr11:2396931|2397233 hsa-miR-874-3p 0 0 1
chr11:2396931|2397233 hsa-miR-920 0 0 1
chr11:2396931|2397233 hsa-miR-1180-5p 0 0 1
chr11:2396931|2397233 hsa-miR-1180-3p 0 0 1
chr11:2396931|2397233 hsa-miR-1237-5p 0 0 1
chr11:2396931|2397233 hsa-miR-1237-3p 0 0 1
chr11:2396931|2397233 hsa-miR-1247-5p 0 0 1
chr11:2396931|2397233 hsa-miR-1247-3p 0 0 1
chr11:2396931|2397233 hsa-miR-1248 0 0 1
chr11:2396931|2397233 hsa-miR-1275 0 0 1
chr11:2396931|2397233 hsa-miR-512-5p 0 0 1
chr11:2396931|2397233 hsa-miR-615-5p 1 1 1
chr11:2396931|2397233 hsa-miR-193a-5p 0 1 1
chr11:2396931|2397233 hsa-miR-146b-3p 0 0 1
chr11:2396931|2397233 hsa-miR-483-5p 0 0 1
chr11:2396931|2397233 hsa-miR-767-3p 0 0 1
chr11:2396931|2397233 hsa-miR-1207-5p 0 0 1
chr11:2396931|2397233 hsa-miR-324-3p 0 0 1
chr11:2396931|2397233 hsa-miR-637 1 0 0
chr11:2396931|2397233 hsa-miR-762 1 0 0
chr11:2396931|2397233 hsa-miR-760 1 0 0
chr11:2396931|2397233 hsa-miR-1183 0 1 0
chr11:2396931|2397233 hsa-miR-2861 1 0 0
chr11:2396931|2397233 hsa-miR-3183 1 1 0
chr11:2396931|2397233 hsa-miR-4281 1 0 0
chr11:2396931|2397233 hsa-miR-3907 0 1 0
chr11:2396931|2397233 hsa-miR-1268b 1 0 0
chr11:2396931|2397233 hsa-miR-4449 1 0 0
chr11:2396931|2397233 hsa-miR-4498 1 0 0
chr11:2396931|2397233 hsa-miR-4538 0 1 0
chr11:2396931|2397233 hsa-miR-4656 1 0 0
chr11:2396931|2397233 hsa-miR-4658 1 0 0
chr11:2396931|2397233 hsa-miR-4675 0 1 0
chr11:2396931|2397233 hsa-miR-5572 1 0 0
chr11:2396931|2397233 hsa-miR-5691 0 1 0
chr11:2396931|2397233 hsa-miR-6085 1 0 0
chr11:2396931|2397233 hsa-miR-6745 1 0 0
chr11:2396931|2397233 hsa-miR-8052 1 1 0
chr11:2396931|2397233 hsa-miR-8075 1 1 0
chr11:2396931|2397233 hsa-miR-8089 1 0 0
chr11:2396931|2397233 hsa-miR-12114 1 0 0
chr11:2396931|2397233 hsa-miR-12115 0 1 0
chr11:2396931|2397233 hsa-miR-12128 1 0 0
chr11:2396931|2397233 hsa-miR-4433b-3p 1 0 0
chr11:2396931|2397233 hsa-miR-128-1-5p 0 1 0
chr11:2396931|2397233 hsa-miR-7155-5p 0 1 0
chr11:2396931|2397233 hsa-miR-3194-3p 1 1 0
chr11:2396931|2397233 hsa-miR-3157-5p 0 1 0
chr11:2396931|2397233 hsa-miR-6765-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6857-5p 1 0 0
chr11:2396931|2397233 hsa-miR-139-3p 1 1 0
chr11:2396931|2397233 hsa-miR-6089 1 0 0
chr11:2396931|2397233 hsa-miR-6867-5p 1 0 0
chr11:2396931|2397233 hsa-miR-4755-3p 0 1 0
chr11:2396931|2397233 hsa-miR-6741-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6727-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6721-5p 0 1 0
chr11:2396931|2397233 hsa-miR-197-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6787-3p 0 1 0
chr11:2396931|2397233 hsa-miR-6716-5p 1 0 0
chr11:2396931|2397233 hsa-miR-423-3p 1 0 0
chr11:2396931|2397233 hsa-miR-6748-5p 1 0 0
chr11:2396931|2397233 hsa-miR-185-3p 1 1 0
chr11:2396931|2397233 hsa-miR-6782-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6810-5p 0 1 0
chr11:2396931|2397233 hsa-miR-1343-3p 0 1 0
chr11:2396931|2397233 hsa-miR-6852-5p 0 1 0
chr11:2396931|2397233 hsa-miR-7109-5p 0 1 0
chr11:2396931|2397233 hsa-miR-7108-3p 0 1 0
chr11:2396931|2397233 hsa-miR-4640-5p 1 0 0
chr11:2396931|2397233 hsa-miR-3691-5p 1 0 0
chr11:2396931|2397233 hsa-miR-5001-3p 0 1 0
chr11:2396931|2397233 hsa-miR-3127-5p 1 1 0
chr11:2396931|2397233 hsa-miR-296-3p 1 0 0
chr11:2396931|2397233 hsa-miR-4717-3p 1 0 0
chr11:2396931|2397233 hsa-miR-6749-5p 1 1 0
chr11:2396931|2397233 hsa-miR-4446-3p 1 1 0
chr11:2396931|2397233 hsa-miR-4652-5p 0 1 0
chr11:2396931|2397233 hsa-miR-3619-3p 1 0 0
chr11:2396931|2397233 hsa-miR-6738-3p 0 1 0
chr11:2396931|2397233 hsa-miR-4746-5p 1 0 0
chr11:2396931|2397233 hsa-miR-4650-5p 0 1 0
chr11:2396931|2397233 hsa-miR-4763-3p 1 1 0
chr11:2396931|2397233 hsa-miR-6769b-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6778-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6816-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6865-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6726-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6756-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6803-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6813-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6815-5p 1 1 0
chr11:2396931|2397233 hsa-miR-7107-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6722-3p 0 1 0
chr11:2396931|2397233 hsa-miR-6763-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6774-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6879-5p 0 1 0
chr11:2396931|2397233 hsa-miR-3620-5p 1 0 0
chr11:2396931|2397233 hsa-miR-1909-3p 1 1 0
chr11:2396931|2397233 hsa-miR-328-5p 1 1 0
chr11:2396931|2397233 hsa-miR-4685-5p 1 0 0
chr11:2396931|2397233 hsa-miR-4726-5p 1 0 0
chr11:2396931|2397233 hsa-miR-4745-5p 1 0 0
chr11:2396931|2397233 hsa-miR-4749-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6846-5p 1 1 0
chr11:2396931|2397233 hsa-miR-6848-5p 1 1 0
chr11:2396931|2397233 hsa-miR-6885-5p 0 1 0
chr11:2396931|2397233 hsa-miR-1238-5p 0 1 0
chr11:2396931|2397233 hsa-miR-4758-5p 1 1 0
chr11:2396931|2397233 hsa-miR-1266-5p 1 0 0
chr11:2396931|2397233 hsa-miR-365a-5p 1 0 0
chr11:2396931|2397233 hsa-miR-365b-5p 1 0 0
chr11:2396931|2397233 hsa-miR-7843-5p 0 1 0
chr11:2396931|2397233 hsa-miR-6855-5p 1 1 0
chr11:2396931|2397233 hsa-miR-6790-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6724-5p 1 0 0
chr11:2396931|2397233 hsa-miR-6762-5p 0 1 0
chr11:2396931|2397233 hsa-miR-6862-3p 1 0 0
chr11:2396931|2397233 hsa-miR-6805-3p 0 1 0
chr11:2396931|2397233 hsa-miR-6744-3p 0 1 0
chr11:2396931|2397233 hsa-miR-6783-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:2396931|2397233
ORF Type ORF1
Protein Length 54
Nucleotide Length 165
Protein Sequence MAEQAEHPGTPGQKDPCPPVPKTQARLHSYTPPTCDVSPEKVTGKFRTKTKPQK
Nucleotide Sequence CTGGCTGAGCAGGCAGAGCACCCTGGGACCCCAGGGCAGAAGGACCCCTGCCCTCCAGTCCCCAAGACCCAGGCCCGTCTCCACTCATACACGCCACCTACATGTGACGTCAGCCCTGAAAAGGTAACAGGAAAGTTCAGAACAAAAACAAAACCCCAAAAGTAA
CircID chr11:2396931|2397233
ORF Type ORF2
Protein Length 50
Nucleotide Length 153
Protein Sequence MGEWLPGEAWLSRQSTLGPQGRRTPALQSPRPRPVSTHTRHLHVTSALKR
Nucleotide Sequence CTGGGCGAGTGGCTCCCAGGAGAGGCCTGGCTGAGCAGGCAGAGCACCCTGGGACCCCAGGGCAGAAGGACCCCTGCCCTCCAGTCCCCAAGACCCAGGCCCGTCTCCACTCATACACGCCACCTACATGTGACGTCAGCCCTGAAAAGGTAA
CircID chr11:2396931|2397233
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MLHVAFLLLGFCFCSELSCYLFRADVTCRWRV
Nucleotide Sequence CTGCTACACGTAGCCTTTTTACTTTTGGGGTTTTGTTTTTGTTCTGAACTTTCCTGTTACCTTTTCAGGGCTGACGTCACATGTAGGTGGCGTGTATGA
CircID chr11:2396931|2397233
ORF Type ORF4
Protein Length 50
Nucleotide Length 150
Protein Sequence MGLGDWRAGVLLPWGPRVLCLLSQASPGSHSPRDSAWPTWGAVSTQPARP
Nucleotide Sequence CTGGGTCTTGGGGACTGGAGGGCAGGGGTCCTTCTGCCCTGGGGTCCCAGGGTGCTCTGCCTGCTCAGCCAGGCCTCTCCTGGGAGCCACTCGCCCAGAGACTCAGCTTGGCCAACTTGGGGGGCTGTGTCCACCCAGCCCGCCCGTCCT
CircID chr11:2396931|2397233
ORF Type ORF5
Protein Length 72
Nucleotide Length 216
Protein Sequence MNFPVTFSGLTSHVGGVYEWRRAWVLGTGGQGSFCPGVPGCSACSARPLLGATRPETQLGQLGGLCPPSPPV
Nucleotide Sequence CTGAACTTTCCTGTTACCTTTTCAGGGCTGACGTCACATGTAGGTGGCGTGTATGAGTGGAGACGGGCCTGGGTCTTGGGGACTGGAGGGCAGGGGTCCTTCTGCCCTGGGGTCCCAGGGTGCTCTGCCTGCTCAGCCAGGCCTCTCCTGGGAGCCACTCGCCCAGAGACTCAGCTTGGCCAACTTGGGGGGCTGTGTCCACCCAGCCCGCCCGTC
CircID chr11:2396931|2397233
ORF Type ORF6
Protein Length 55
Nucleotide Length 165
Protein Sequence MSGDGPGSWGLEGRGPSALGSQGALPAQPGLSWEPLAQRLSLANLGGCVHPARPS
Nucleotide Sequence ATGAGTGGAGACGGGCCTGGGTCTTGGGGACTGGAGGGCAGGGGTCCTTCTGCCCTGGGGTCCCAGGGTGCTCTGCCTGCTCAGCCAGGCCTCTCCTGGGAGCCACTCGCCCAGAGACTCAGCTTGGCCAACTTGGGGGGCTGTGTCCACCCAGCCCGCCCGTCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab