CircRNA Information

General Information
circRNA Basic Information
CircID chr11:2403295|2403442
Strand +
CircType exon
Host Gene ENSG00000184281.13;
Algorism CIRI2;
Sequence TCCTCAGCCTCTGGGCTCCCGGGCCCGGCCAGATGGGCCAGCTCCACAGGGCCCTCGCCCCTGTCTGTGGCAGGATTCCCAAGGCCGCCCCTGCCTGGCTCTCCCACCTTCCCCAGGACCCTCTTCCTCTCGTGTCTGGCTTCGACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:2403295|2403442 hsa-miR-940 0 0 1
chr11:2403295|2403442 hsa-miR-1291 0 0 1
chr11:2403295|2403442 hsa-miR-1324 0 0 1
chr11:2403295|2403442 hsa-miR-485-5p 0 0 1
chr11:2403295|2403442 hsa-miR-146b-3p 0 1 1
chr11:2403295|2403442 hsa-miR-1207-5p 1 1 1
chr11:2403295|2403442 hsa-miR-571 0 1 0
chr11:2403295|2403442 hsa-miR-602 1 0 0
chr11:2403295|2403442 hsa-miR-608 1 1 0
chr11:2403295|2403442 hsa-miR-663a 1 0 0
chr11:2403295|2403442 hsa-miR-762 1 0 0
chr11:2403295|2403442 hsa-miR-765 1 0 0
chr11:2403295|2403442 hsa-miR-1182 1 1 0
chr11:2403295|2403442 hsa-miR-1203 1 0 0
chr11:2403295|2403442 hsa-miR-2861 1 0 0
chr11:2403295|2403442 hsa-miR-3154 1 0 0
chr11:2403295|2403442 hsa-miR-3196 1 0 0
chr11:2403295|2403442 hsa-miR-4271 1 0 0
chr11:2403295|2403442 hsa-miR-4281 1 0 0
chr11:2403295|2403442 hsa-miR-3916 0 1 0
chr11:2403295|2403442 hsa-miR-4442 1 0 0
chr11:2403295|2403442 hsa-miR-4449 1 0 0
chr11:2403295|2403442 hsa-miR-4462 1 0 0
chr11:2403295|2403442 hsa-miR-4463 1 0 0
chr11:2403295|2403442 hsa-miR-2392 1 0 0
chr11:2403295|2403442 hsa-miR-4514 0 1 0
chr11:2403295|2403442 hsa-miR-4516 1 0 0
chr11:2403295|2403442 hsa-miR-4533 1 0 0
chr11:2403295|2403442 hsa-miR-3960 1 0 0
chr11:2403295|2403442 hsa-miR-4651 1 0 0
chr11:2403295|2403442 hsa-miR-4656 1 0 0
chr11:2403295|2403442 hsa-miR-4673 1 1 0
chr11:2403295|2403442 hsa-miR-4688 1 0 0
chr11:2403295|2403442 hsa-miR-4721 1 0 0
chr11:2403295|2403442 hsa-miR-4739 1 0 0
chr11:2403295|2403442 hsa-miR-5192 1 0 0
chr11:2403295|2403442 hsa-miR-5787 1 0 0
chr11:2403295|2403442 hsa-miR-6077 1 0 0
chr11:2403295|2403442 hsa-miR-6088 1 0 0
chr11:2403295|2403442 hsa-miR-6090 1 0 0
chr11:2403295|2403442 hsa-miR-6124 1 0 0
chr11:2403295|2403442 hsa-miR-6127 1 0 0
chr11:2403295|2403442 hsa-miR-6133 1 0 0
chr11:2403295|2403442 hsa-miR-6745 1 0 0
chr11:2403295|2403442 hsa-miR-8085 1 0 0
chr11:2403295|2403442 hsa-miR-8089 1 1 0
chr11:2403295|2403442 hsa-miR-12115 1 0 0
chr11:2403295|2403442 hsa-miR-1247-3p 0 1 0
chr11:2403295|2403442 hsa-miR-7106-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6825-5p 1 1 0
chr11:2403295|2403442 hsa-miR-6894-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6857-5p 1 0 0
chr11:2403295|2403442 hsa-miR-1972 1 0 0
chr11:2403295|2403442 hsa-miR-6799-5p 1 0 0
chr11:2403295|2403442 hsa-miR-766-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6804-5p 1 0 0
chr11:2403295|2403442 hsa-miR-3622a-5p 1 0 0
chr11:2403295|2403442 hsa-miR-7851-3p 1 0 0
chr11:2403295|2403442 hsa-miR-5187-5p 1 0 0
chr11:2403295|2403442 hsa-miR-7114-5p 0 1 0
chr11:2403295|2403442 hsa-miR-6807-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6880-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6746-5p 1 0 0
chr11:2403295|2403442 hsa-miR-4722-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6730-5p 1 0 0
chr11:2403295|2403442 hsa-miR-4755-3p 1 1 0
chr11:2403295|2403442 hsa-miR-197-5p 1 0 0
chr11:2403295|2403442 hsa-miR-7845-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6716-5p 1 0 0
chr11:2403295|2403442 hsa-miR-3180-3p 1 0 0
chr11:2403295|2403442 hsa-miR-6793-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6796-5p 1 1 0
chr11:2403295|2403442 hsa-miR-6732-5p 1 0 0
chr11:2403295|2403442 hsa-miR-3190-3p 1 0 0
chr11:2403295|2403442 hsa-miR-6805-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6827-5p 1 1 0
chr11:2403295|2403442 hsa-miR-23a-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6798-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6760-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6782-5p 1 1 0
chr11:2403295|2403442 hsa-miR-6874-5p 0 1 0
chr11:2403295|2403442 hsa-miR-3194-5p 1 0 0
chr11:2403295|2403442 hsa-miR-1226-5p 1 0 0
chr11:2403295|2403442 hsa-miR-4793-5p 1 0 0
chr11:2403295|2403442 hsa-miR-185-5p 1 0 0
chr11:2403295|2403442 hsa-miR-4786-3p 1 0 0
chr11:2403295|2403442 hsa-miR-1229-5p 1 0 0
chr11:2403295|2403442 hsa-miR-4640-5p 1 0 0
chr11:2403295|2403442 hsa-miR-1908-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6771-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6749-5p 1 0 0
chr11:2403295|2403442 hsa-miR-4743-5p 1 0 0
chr11:2403295|2403442 hsa-miR-149-3p 1 0 0
chr11:2403295|2403442 hsa-miR-6824-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6789-5p 1 0 0
chr11:2403295|2403442 hsa-miR-7156-3p 1 0 0
chr11:2403295|2403442 hsa-miR-7160-3p 0 1 0
chr11:2403295|2403442 hsa-miR-887-5p 0 1 0
chr11:2403295|2403442 hsa-miR-483-5p 1 0 0
chr11:2403295|2403442 hsa-miR-10400-5p 1 0 0
chr11:2403295|2403442 hsa-miR-1233-5p 1 1 0
chr11:2403295|2403442 hsa-miR-4763-3p 1 1 0
chr11:2403295|2403442 hsa-miR-6769b-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6778-5p 1 1 0
chr11:2403295|2403442 hsa-miR-6787-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6816-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6870-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6893-5p 1 0 0
chr11:2403295|2403442 hsa-miR-1343-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6726-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6737-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6743-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6756-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6803-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6851-5p 1 0 0
chr11:2403295|2403442 hsa-miR-11181-3p 1 0 0
chr11:2403295|2403442 hsa-miR-1249-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6722-3p 1 1 0
chr11:2403295|2403442 hsa-miR-6779-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6808-5p 1 1 0
chr11:2403295|2403442 hsa-miR-6875-5p 1 0 0
chr11:2403295|2403442 hsa-miR-7111-5p 1 0 0
chr11:2403295|2403442 hsa-miR-3620-5p 1 0 0
chr11:2403295|2403442 hsa-miR-4728-5p 1 0 0
chr11:2403295|2403442 hsa-miR-5196-5p 1 1 0
chr11:2403295|2403442 hsa-miR-6780b-5p 1 1 0
chr11:2403295|2403442 hsa-miR-10396b-5p 1 0 0
chr11:2403295|2403442 hsa-miR-10526-3p 1 0 0
chr11:2403295|2403442 hsa-miR-1237-5p 1 0 0
chr11:2403295|2403442 hsa-miR-1909-3p 1 1 0
chr11:2403295|2403442 hsa-miR-4649-5p 1 1 0
chr11:2403295|2403442 hsa-miR-4725-3p 1 1 0
chr11:2403295|2403442 hsa-miR-6729-5p 1 1 0
chr11:2403295|2403442 hsa-miR-6738-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6777-5p 0 1 0
chr11:2403295|2403442 hsa-miR-6794-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6858-5p 1 0 0
chr11:2403295|2403442 hsa-miR-939-5p 1 1 0
chr11:2403295|2403442 hsa-miR-30c-1-3p 1 0 0
chr11:2403295|2403442 hsa-miR-6731-5p 1 1 0
chr11:2403295|2403442 hsa-miR-6856-5p 1 1 0
chr11:2403295|2403442 hsa-miR-6773-5p 0 1 0
chr11:2403295|2403442 hsa-miR-6736-5p 1 0 0
chr11:2403295|2403442 hsa-miR-3173-3p 1 0 0
chr11:2403295|2403442 hsa-miR-4747-5p 1 1 0
chr11:2403295|2403442 hsa-miR-6876-5p 1 0 0
chr11:2403295|2403442 hsa-miR-4667-5p 0 1 0
chr11:2403295|2403442 hsa-miR-6724-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6791-5p 1 0 0
chr11:2403295|2403442 hsa-miR-6775-3p 0 1 0
chr11:2403295|2403442 hsa-miR-6859-5p 0 1 0
chr11:2403295|2403442 hsa-miR-6884-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:2403295|2403442
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MSVAGFPRPPLPGSPTFPRTLFLSCLAST
Nucleotide Sequence CTGTCTGTGGCAGGATTCCCAAGGCCGCCCCTGCCTGGCTCTCCCACCTTCCCCAGGACCCTCTTCCTCTCGTGTCTGGCTTCGACC
CircID chr11:2403295|2403442
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MGSRARPDGPAPQGPRPCLWQDSQGRPCLALPPSPGPSSSRVWLRP
Nucleotide Sequence CTGGGCTCCCGGGCCCGGCCAGATGGGCCAGCTCCACAGGGCCCTCGCCCCTGTCTGTGGCAGGATTCCCAAGGCCGCCCCTGCCTGGCTCTCCCACCTTCCCCAGGACCCTCTTCCTCTCGTGTCTGGCTTCGACCC
CircID chr11:2403295|2403442
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MGQLHRALAPVCGRIPKAAPAWLSHLPQDPLPLVSGFD
Nucleotide Sequence ATGGGCCAGCTCCACAGGGCCCTCGCCCCTGTCTGTGGCAGGATTCCCAAGGCCGCCCCTGCCTGGCTCTCCCACCTTCCCCAGGACCCTCTTCCTCTCGTGTCTGGCTTCGAC
CircID chr11:2403295|2403442
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MGILPQTGARALWSWPIWPGPGAQRLR
Nucleotide Sequence TTGGGAATCCTGCCACAGACAGGGGCGAGGGCCCTGTGGAGCTGGCCCATCTGGCCGGGCCCGGGAGCCCAGAGGCTGAGG
CircID chr11:2403295|2403442
ORF Type ORF5
Protein Length 38
Nucleotide Length 114
Protein Sequence MGKVGEPGRGGLGNPATDRGEGPVELAHLAGPGSPEAE
Nucleotide Sequence CTGGGGAAGGTGGGAGAGCCAGGCAGGGGCGGCCTTGGGAATCCTGCCACAGACAGGGGCGAGGGCCCTGTGGAGCTGGCCCATCTGGCCGGGCCCGGGAGCCCAGAGGCTGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab