CircRNA Information

General Information
circRNA Basic Information
CircID chr11:248790|249057
Strand +
CircType exon
Host Gene ENSG00000185627.16;
Algorism CIRI2;
Sequence CTGCTGGCCCCAGGCAGTCTTCAGAGTCTGGAACCGCTCTACGTTGCCACTGTTGAAGGCATAGAGGGTGTCAATCAGCCACTGCCGGTCAGTATTCCTCAGGGACTCCAGCACAGGGTGCATGAGCTGTGAGGATGGAGATGGTCAGCTAGTAACACTTTAGTCTCTCTCGTTAAGGAAGCTGAGCTCAGGGTCAACTTACGAGTTCTCCAAAGTTAAAAACTCCCTCGCCGAGAAGTCCTGCTAGCCCCAGCGTGAAGGCTCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:248790|249057 hsa-miR-17-5p 0 0 1
chr11:248790|249057 hsa-miR-17-3p 0 0 1
chr11:248790|249057 hsa-miR-20a-5p 0 0 1
chr11:248790|249057 hsa-miR-20a-3p 0 0 1
chr11:248790|249057 hsa-miR-93-5p 0 0 1
chr11:248790|249057 hsa-miR-93-3p 0 0 1
chr11:248790|249057 hsa-miR-106a-5p 0 0 1
chr11:248790|249057 hsa-miR-106a-3p 0 0 1
chr11:248790|249057 hsa-miR-10a-5p 0 0 1
chr11:248790|249057 hsa-miR-10a-3p 0 0 1
chr11:248790|249057 hsa-miR-10b-5p 0 0 1
chr11:248790|249057 hsa-miR-10b-3p 0 0 1
chr11:248790|249057 hsa-miR-34a-5p 0 0 1
chr11:248790|249057 hsa-miR-34a-3p 0 0 1
chr11:248790|249057 hsa-miR-200b-5p 0 0 1
chr11:248790|249057 hsa-miR-200b-3p 0 0 1
chr11:248790|249057 hsa-miR-136-5p 0 0 1
chr11:248790|249057 hsa-miR-136-3p 0 0 1
chr11:248790|249057 hsa-miR-146a-5p 0 0 1
chr11:248790|249057 hsa-miR-146a-3p 0 0 1
chr11:248790|249057 hsa-miR-200c-5p 0 0 1
chr11:248790|249057 hsa-miR-200c-3p 0 0 1
chr11:248790|249057 hsa-miR-106b-5p 0 0 1
chr11:248790|249057 hsa-miR-106b-3p 0 0 1
chr11:248790|249057 hsa-miR-382-5p 0 0 1
chr11:248790|249057 hsa-miR-382-3p 0 0 1
chr11:248790|249057 hsa-miR-20b-5p 0 0 1
chr11:248790|249057 hsa-miR-20b-3p 0 0 1
chr11:248790|249057 hsa-miR-429 0 0 1
chr11:248790|249057 hsa-miR-449a 0 1 1
chr11:248790|249057 hsa-miR-519d-5p 0 0 1
chr11:248790|249057 hsa-miR-519d-3p 0 0 1
chr11:248790|249057 hsa-miR-504-5p 0 0 1
chr11:248790|249057 hsa-miR-504-3p 0 0 1
chr11:248790|249057 hsa-miR-591 0 0 1
chr11:248790|249057 hsa-miR-620 0 0 1
chr11:248790|249057 hsa-miR-621 0 0 1
chr11:248790|249057 hsa-miR-661 0 0 1
chr11:248790|249057 hsa-miR-449b-5p 0 0 1
chr11:248790|249057 hsa-miR-449b-3p 0 0 1
chr11:248790|249057 hsa-miR-421 0 0 1
chr11:248790|249057 hsa-miR-1286 0 0 1
chr11:248790|249057 hsa-miR-1287-5p 0 0 1
chr11:248790|249057 hsa-miR-1287-3p 0 0 1
chr11:248790|249057 hsa-miR-1270 0 0 1
chr11:248790|249057 hsa-miR-1277-5p 0 0 1
chr11:248790|249057 hsa-miR-1277-3p 0 0 1
chr11:248790|249057 hsa-miR-1307-5p 0 0 1
chr11:248790|249057 hsa-miR-1307-3p 0 0 1
chr11:248790|249057 hsa-miR-1289 0 1 1
chr11:248790|249057 hsa-miR-525-5p 0 0 1
chr11:248790|249057 hsa-miR-532-5p 0 1 1
chr11:248790|249057 hsa-miR-520a-5p 0 0 1
chr11:248790|249057 hsa-miR-125a-5p 0 1 1
chr11:248790|249057 hsa-miR-502-3p 0 1 1
chr11:248790|249057 hsa-miR-34c-5p 0 0 1
chr11:248790|249057 hsa-miR-146b-5p 0 0 1
chr11:248790|249057 hsa-miR-501-3p 0 1 1
chr11:248790|249057 hsa-miR-516a-3p 0 1 1
chr11:248790|249057 hsa-miR-125b 0 0 1
chr11:248790|249057 hsa-miR-514 0 0 1
chr11:248790|249057 hsa-miR-1254 0 0 1
chr11:248790|249057 hsa-miR-768-5p 0 0 1
chr11:248790|249057 hsa-miR-573 0 1 0
chr11:248790|249057 hsa-miR-663a 1 0 0
chr11:248790|249057 hsa-miR-762 1 0 0
chr11:248790|249057 hsa-miR-1469 1 0 0
chr11:248790|249057 hsa-miR-4319 0 1 0
chr11:248790|249057 hsa-miR-4489 1 0 0
chr11:248790|249057 hsa-miR-4498 1 1 0
chr11:248790|249057 hsa-miR-4710 1 0 0
chr11:248790|249057 hsa-miR-4739 1 0 0
chr11:248790|249057 hsa-miR-4741 1 0 0
chr11:248790|249057 hsa-miR-5698 1 0 0
chr11:248790|249057 hsa-miR-5787 1 0 0
chr11:248790|249057 hsa-miR-6070 0 1 0
chr11:248790|249057 hsa-miR-6127 1 0 0
chr11:248790|249057 hsa-miR-6129 0 1 0
chr11:248790|249057 hsa-miR-6165 1 0 0
chr11:248790|249057 hsa-miR-8083 0 1 0
chr11:248790|249057 hsa-miR-8089 1 0 0
chr11:248790|249057 hsa-miR-9718 1 0 0
chr11:248790|249057 hsa-miR-12115 1 0 0
chr11:248790|249057 hsa-miR-1227-5p 0 1 0
chr11:248790|249057 hsa-miR-4728-3p 1 0 0
chr11:248790|249057 hsa-miR-4725-5p 0 1 0
chr11:248790|249057 hsa-miR-185-3p 1 0 0
chr11:248790|249057 hsa-miR-6786-5p 1 0 0
chr11:248790|249057 hsa-miR-6784-5p 1 0 0
chr11:248790|249057 hsa-miR-4787-5p 1 0 0
chr11:248790|249057 hsa-miR-4446-3p 1 0 0
chr11:248790|249057 hsa-miR-6825-3p 1 0 0
chr11:248790|249057 hsa-miR-3191-3p 1 0 0
chr11:248790|249057 hsa-miR-3614-3p 0 1 0
chr11:248790|249057 hsa-miR-6865-3p 0 1 0
chr11:248790|249057 hsa-miR-6792-5p 1 0 0
chr11:248790|249057 hsa-miR-3670 0 1 0
chr11:248790|249057 hsa-miR-670-5p 0 1 0
chr11:248790|249057 hsa-miR-6847-3p 0 1 0
chr11:248790|249057 hsa-miR-514a-3p 0 1 0
chr11:248790|249057 hsa-miR-10400-5p 1 0 0
chr11:248790|249057 hsa-miR-4763-3p 1 0 0
chr11:248790|249057 hsa-miR-6787-5p 1 0 0
chr11:248790|249057 hsa-miR-5001-5p 1 0 0
chr11:248790|249057 hsa-miR-3620-5p 1 0 0
chr11:248790|249057 hsa-miR-6836-5p 1 0 0
chr11:248790|249057 hsa-miR-10396b-5p 1 0 0
chr11:248790|249057 hsa-miR-4649-5p 1 0 0
chr11:248790|249057 hsa-miR-6729-5p 1 0 0
chr11:248790|249057 hsa-miR-6858-5p 1 0 0
chr11:248790|249057 hsa-miR-3198 0 1 0
chr11:248790|249057 hsa-miR-6791-5p 1 1 0
chr11:248790|249057 hsa-miR-6822-5p 1 0 0
chr11:248790|249057 hsa-miR-514b-3p 0 1 0
chr11:248790|249057 hsa-miR-517c-3p 0 1 0
chr11:248790|249057 hsa-miR-516b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:248790|249057
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence LLAPGSLQSLEPLYVATVEGIEGVNQPLPVSIPQGLQHRVHEL
Nucleotide Sequence CTGCTGGCCCCAGGCAGTCTTCAGAGTCTGGAACCGCTCTACGTTGCCACTGTTGAAGGCATAGAGGGTGTCAATCAGCCACTGCCGGTCAGTATTCCTCAGGGACTCCAGCACAGGGTGCATGAGCTGTGA
CircID chr11:248790|249057
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MHPVLESLRNTDRQWLIDTLYAFNSGNVERFQTLKTAWGQQ
Nucleotide Sequence ATGCACCCTGTGCTGGAGTCCCTGAGGAATACTGACCGGCAGTGGCTGATTGACACCCTCTATGCCTTCAACAGTGGCAACGTAGAGCGGTTCCAGACTCTGAAGACTGCCTGGGGCCAGCAG
CircID chr11:248790|249057
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MTLSSASLTRETKVLLADHLHPHSSCTLCWSP
Nucleotide Sequence TTGACCCTGAGCTCAGCTTCCTTAACGAGAGAGACTAAAGTGTTACTAGCTGACCATCTCCATCCTCACAGCTCATGCACCCTGTGCTGGAGTCCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab