CircRNA Information

General Information
circRNA Basic Information
CircID chr11:251592|251879
Strand +
CircType exon
Host Gene ENSG00000185627.16;
Algorism CIRI2;
Sequence CTCGTCTATACTGCCTTTCACCAGCCCCACCGAAAGGGCCTTCATCACCAGAAGCTCCACCTGTGCAGAGAGGGAGGCGTGTGTAAGACAAGATAGCCTGACACACCCCCATGGACCCAGATGGCTTGTGAGAAGCAGATGCCGCTCCTCCCGTCATTTTTTACTGTCTAGGGAGCACAGCGCTCACACAAGAGCCTTGACTCCTCCATGTGGCAGCTTTGCTGCTCTAACACCCTGAGCCTAGGGACCGTACCTCATTCACTGTGATTTTAGCACTTTTGGCAATTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:251592|251879 hsa-let-7b-5p 0 0 1
chr11:251592|251879 hsa-let-7b-3p 0 0 1
chr11:251592|251879 hsa-let-7c-5p 0 0 1
chr11:251592|251879 hsa-let-7c-3p 0 0 1
chr11:251592|251879 hsa-let-7d-5p 0 0 1
chr11:251592|251879 hsa-let-7d-3p 0 0 1
chr11:251592|251879 hsa-let-7e-5p 0 0 1
chr11:251592|251879 hsa-let-7e-3p 0 0 1
chr11:251592|251879 hsa-miR-15a-5p 0 0 1
chr11:251592|251879 hsa-miR-15a-3p 0 0 1
chr11:251592|251879 hsa-miR-17-5p 0 0 1
chr11:251592|251879 hsa-miR-17-3p 0 0 1
chr11:251592|251879 hsa-miR-20a-5p 0 0 1
chr11:251592|251879 hsa-miR-20a-3p 0 0 1
chr11:251592|251879 hsa-miR-22-5p 0 0 1
chr11:251592|251879 hsa-miR-22-3p 0 0 1
chr11:251592|251879 hsa-miR-27a-5p 0 0 1
chr11:251592|251879 hsa-miR-27a-3p 0 0 1
chr11:251592|251879 hsa-miR-93-5p 0 0 1
chr11:251592|251879 hsa-miR-93-3p 0 0 1
chr11:251592|251879 hsa-miR-98-5p 0 0 1
chr11:251592|251879 hsa-miR-98-3p 0 0 1
chr11:251592|251879 hsa-miR-106a-5p 0 0 1
chr11:251592|251879 hsa-miR-106a-3p 0 0 1
chr11:251592|251879 hsa-let-7g-5p 0 0 1
chr11:251592|251879 hsa-let-7g-3p 0 0 1
chr11:251592|251879 hsa-let-7i-5p 0 0 1
chr11:251592|251879 hsa-let-7i-3p 0 0 1
chr11:251592|251879 hsa-miR-15b-5p 0 0 1
chr11:251592|251879 hsa-miR-15b-3p 0 0 1
chr11:251592|251879 hsa-miR-27b-5p 0 0 1
chr11:251592|251879 hsa-miR-27b-3p 0 0 1
chr11:251592|251879 hsa-miR-195-5p 0 0 1
chr11:251592|251879 hsa-miR-195-3p 0 0 1
chr11:251592|251879 hsa-miR-320a-5p 0 0 1
chr11:251592|251879 hsa-miR-320a-3p 0 0 1
chr11:251592|251879 hsa-miR-106b-5p 0 0 1
chr11:251592|251879 hsa-miR-106b-3p 0 0 1
chr11:251592|251879 hsa-miR-302a-5p 0 0 1
chr11:251592|251879 hsa-miR-302a-3p 0 0 1
chr11:251592|251879 hsa-miR-302b-5p 0 0 1
chr11:251592|251879 hsa-miR-302b-3p 0 0 1
chr11:251592|251879 hsa-miR-302c-5p 0 0 1
chr11:251592|251879 hsa-miR-302c-3p 0 0 1
chr11:251592|251879 hsa-miR-302d-5p 0 0 1
chr11:251592|251879 hsa-miR-302d-3p 0 0 1
chr11:251592|251879 hsa-miR-372-5p 0 0 1
chr11:251592|251879 hsa-miR-372-3p 0 0 1
chr11:251592|251879 hsa-miR-373-5p 0 0 1
chr11:251592|251879 hsa-miR-373-3p 0 0 1
chr11:251592|251879 hsa-miR-424-5p 0 0 1
chr11:251592|251879 hsa-miR-424-3p 0 0 1
chr11:251592|251879 hsa-miR-20b-5p 0 0 1
chr11:251592|251879 hsa-miR-20b-3p 0 0 1
chr11:251592|251879 hsa-miR-484 0 0 1
chr11:251592|251879 hsa-miR-488-5p 0 0 1
chr11:251592|251879 hsa-miR-488-3p 0 0 1
chr11:251592|251879 hsa-miR-511-5p 0 0 1
chr11:251592|251879 hsa-miR-511-3p 0 0 1
chr11:251592|251879 hsa-miR-202-5p 0 0 1
chr11:251592|251879 hsa-miR-202-3p 0 0 1
chr11:251592|251879 hsa-miR-497-5p 0 0 1
chr11:251592|251879 hsa-miR-497-3p 0 0 1
chr11:251592|251879 hsa-miR-520e-5p 0 0 1
chr11:251592|251879 hsa-miR-520e-3p 0 0 1
chr11:251592|251879 hsa-miR-520b-5p 0 0 1
chr11:251592|251879 hsa-miR-520b-3p 0 0 1
chr11:251592|251879 hsa-miR-519d-5p 0 0 1
chr11:251592|251879 hsa-miR-519d-3p 0 0 1
chr11:251592|251879 hsa-miR-545-5p 0 0 1
chr11:251592|251879 hsa-miR-545-3p 0 0 1
chr11:251592|251879 hsa-miR-552-5p 0 0 1
chr11:251592|251879 hsa-miR-552-3p 0 0 1
chr11:251592|251879 hsa-miR-581 0 0 1
chr11:251592|251879 hsa-miR-592 0 0 1
chr11:251592|251879 hsa-miR-597-5p 0 0 1
chr11:251592|251879 hsa-miR-597-3p 0 0 1
chr11:251592|251879 hsa-miR-600 0 0 1
chr11:251592|251879 hsa-miR-603 0 0 1
chr11:251592|251879 hsa-miR-609 0 0 1
chr11:251592|251879 hsa-miR-645 0 0 1
chr11:251592|251879 hsa-miR-765 0 0 1
chr11:251592|251879 hsa-miR-1229-5p 0 0 1
chr11:251592|251879 hsa-miR-1229-3p 0 0 1
chr11:251592|251879 hsa-miR-1257 0 1 1
chr11:251592|251879 hsa-miR-1266-5p 0 0 1
chr11:251592|251879 hsa-miR-1266-3p 0 0 1
chr11:251592|251879 hsa-miR-302e 0 0 1
chr11:251592|251879 hsa-miR-1281 0 1 1
chr11:251592|251879 hsa-miR-513b-5p 0 0 1
chr11:251592|251879 hsa-miR-513b-3p 0 0 1
chr11:251592|251879 hsa-miR-339-3p 0 0 1
chr11:251592|251879 hsa-miR-320b 0 0 1
chr11:251592|251879 hsa-miR-320c 0 0 1
chr11:251592|251879 hsa-miR-520d-3p 0 0 1
chr11:251592|251879 hsa-miR-320d 0 0 1
chr11:251592|251879 hsa-miR-342-3p 0 0 1
chr11:251592|251879 hsa-miR-520a-3p 0 0 1
chr11:251592|251879 hsa-miR-520c-3p 0 0 1
chr11:251592|251879 hsa-miR-362-3p 0 0 1
chr11:251592|251879 hsa-miR-128 0 0 1
chr11:251592|251879 hsa-miR-642 0 0 1
chr11:251592|251879 hsa-miR-16 0 0 1
chr11:251592|251879 hsa-miR-138 0 0 1
chr11:251592|251879 hsa-let-7a 0 0 1
chr11:251592|251879 hsa-let-7f 0 0 1
chr11:251592|251879 hsa-miR-24 0 0 1
chr11:251592|251879 hsa-miR-329 0 0 1
chr11:251592|251879 hsa-miR-147 0 0 1
chr11:251592|251879 hsa-miR-557 1 1 0
chr11:251592|251879 hsa-miR-608 1 0 0
chr11:251592|251879 hsa-miR-612 1 0 0
chr11:251592|251879 hsa-miR-2278 0 1 0
chr11:251592|251879 hsa-miR-3138 1 0 0
chr11:251592|251879 hsa-miR-3196 1 0 0
chr11:251592|251879 hsa-miR-4299 0 1 0
chr11:251592|251879 hsa-miR-4259 1 0 0
chr11:251592|251879 hsa-miR-4281 1 0 0
chr11:251592|251879 hsa-miR-4449 1 0 0
chr11:251592|251879 hsa-miR-4466 1 0 0
chr11:251592|251879 hsa-miR-4489 1 0 0
chr11:251592|251879 hsa-miR-4498 0 1 0
chr11:251592|251879 hsa-miR-4654 1 0 0
chr11:251592|251879 hsa-miR-4739 1 0 0
chr11:251592|251879 hsa-miR-4754 1 0 0
chr11:251592|251879 hsa-miR-6081 1 0 0
chr11:251592|251879 hsa-miR-6086 1 0 0
chr11:251592|251879 hsa-miR-6126 0 1 0
chr11:251592|251879 hsa-miR-6860 1 0 0
chr11:251592|251879 hsa-miR-1843 0 1 0
chr11:251592|251879 hsa-miR-12114 1 0 0
chr11:251592|251879 hsa-miR-12115 1 0 0
chr11:251592|251879 hsa-miR-12128 1 0 0
chr11:251592|251879 hsa-miR-128-3p 1 1 0
chr11:251592|251879 hsa-miR-92a-2-5p 0 1 0
chr11:251592|251879 hsa-miR-6747-5p 1 1 0
chr11:251592|251879 hsa-miR-671-5p 1 0 0
chr11:251592|251879 hsa-miR-6861-5p 1 0 0
chr11:251592|251879 hsa-miR-7106-5p 1 1 0
chr11:251592|251879 hsa-miR-6894-5p 1 0 0
chr11:251592|251879 hsa-miR-125a-3p 1 0 0
chr11:251592|251879 hsa-miR-224-5p 1 0 0
chr11:251592|251879 hsa-miR-6880-5p 1 0 0
chr11:251592|251879 hsa-miR-512-3p 1 0 0
chr11:251592|251879 hsa-miR-197-5p 1 0 0
chr11:251592|251879 hsa-miR-6776-5p 1 0 0
chr11:251592|251879 hsa-miR-3180-3p 1 0 0
chr11:251592|251879 hsa-miR-6732-5p 1 0 0
chr11:251592|251879 hsa-miR-23a-5p 1 0 0
chr11:251592|251879 hsa-miR-6782-5p 1 0 0
chr11:251592|251879 hsa-miR-4793-3p 1 0 0
chr11:251592|251879 hsa-miR-5008-5p 1 0 0
chr11:251592|251879 hsa-miR-615-5p 1 0 0
chr11:251592|251879 hsa-miR-6786-5p 1 1 0
chr11:251592|251879 hsa-miR-5088-5p 1 0 0
chr11:251592|251879 hsa-miR-7109-5p 1 0 0
chr11:251592|251879 hsa-miR-3667-3p 0 1 0
chr11:251592|251879 hsa-miR-6771-5p 1 0 0
chr11:251592|251879 hsa-miR-4717-3p 0 1 0
chr11:251592|251879 hsa-miR-4787-5p 1 0 0
chr11:251592|251879 hsa-miR-149-3p 1 0 0
chr11:251592|251879 hsa-miR-6802-5p 1 0 0
chr11:251592|251879 hsa-miR-6886-5p 1 0 0
chr11:251592|251879 hsa-miR-593-3p 1 0 0
chr11:251592|251879 hsa-miR-1225-5p 1 0 0
chr11:251592|251879 hsa-miR-7112-3p 1 0 0
chr11:251592|251879 hsa-miR-331-5p 1 0 0
chr11:251592|251879 hsa-miR-6778-3p 0 1 0
chr11:251592|251879 hsa-miR-216a-3p 1 0 0
chr11:251592|251879 hsa-miR-4746-5p 1 0 0
chr11:251592|251879 hsa-miR-642a-5p 0 1 0
chr11:251592|251879 hsa-miR-4802-5p 0 1 0
chr11:251592|251879 hsa-miR-1343-5p 1 0 0
chr11:251592|251879 hsa-miR-5001-5p 0 1 0
chr11:251592|251879 hsa-miR-6752-5p 1 1 0
chr11:251592|251879 hsa-miR-6756-5p 1 1 0
chr11:251592|251879 hsa-miR-6803-5p 1 1 0
chr11:251592|251879 hsa-miR-6842-5p 1 0 0
chr11:251592|251879 hsa-miR-7110-5p 1 1 0
chr11:251592|251879 hsa-miR-11181-3p 0 1 0
chr11:251592|251879 hsa-miR-1249-5p 1 0 0
chr11:251592|251879 hsa-miR-6722-3p 1 0 0
chr11:251592|251879 hsa-miR-6751-5p 1 1 0
chr11:251592|251879 hsa-miR-6779-5p 1 1 0
chr11:251592|251879 hsa-miR-6879-5p 0 1 0
chr11:251592|251879 hsa-miR-7111-5p 1 0 0
chr11:251592|251879 hsa-miR-3127-3p 1 0 0
chr11:251592|251879 hsa-miR-4685-3p 0 1 0
chr11:251592|251879 hsa-miR-4728-5p 1 0 0
chr11:251592|251879 hsa-miR-4632-5p 1 1 0
chr11:251592|251879 hsa-miR-6777-5p 1 0 0
chr11:251592|251879 hsa-miR-6846-5p 1 0 0
chr11:251592|251879 hsa-miR-6848-5p 1 0 0
chr11:251592|251879 hsa-miR-3187-5p 1 0 0
chr11:251592|251879 hsa-miR-6831-5p 1 0 0
chr11:251592|251879 hsa-miR-6885-5p 1 0 0
chr11:251592|251879 hsa-miR-939-5p 1 0 0
chr11:251592|251879 hsa-miR-5008-3p 1 1 0
chr11:251592|251879 hsa-miR-4665-5p 1 0 0
chr11:251592|251879 hsa-miR-6791-5p 1 0 0
chr11:251592|251879 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:251592|251879
ORF Type ORF1
Protein Length 75
Nucleotide Length 228
Protein Sequence MPFTSPTERAFITRSSTCAEREACVRQDSLTHPHGPRWLVRSRCRSSRHFLLSREHSAHTRALTPPCGSFAALTP
Nucleotide Sequence CTGCCTTTCACCAGCCCCACCGAAAGGGCCTTCATCACCAGAAGCTCCACCTGTGCAGAGAGGGAGGCGTGTGTAAGACAAGATAGCCTGACACACCCCCATGGACCCAGATGGCTTGTGAGAAGCAGATGCCGCTCCTCCCGTCATTTTTTACTGTCTAGGGAGCACAGCGCTCACACAAGAGCCTTGACTCCTCCATGTGGCAGCTTTGCTGCTCTAACACCCTGA
CircID chr11:251592|251879
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MLLTSHLGPWGCVRLSCLTHASLSAQVELLVMKALSVGLVKGSIDE
Nucleotide Sequence CTGCTTCTCACAAGCCATCTGGGTCCATGGGGGTGTGTCAGGCTATCTTGTCTTACACACGCCTCCCTCTCTGCACAGGTGGAGCTTCTGGTGATGAAGGCCCTTTCGGTGGGGCTGGTGAAAGGCAGTATAGACGAG
CircID chr11:251592|251879
ORF Type ORF3
Protein Length 52
Nucleotide Length 156
Protein Sequence MTGGAASASHKPSGSMGVCQAILSYTRLPLCTGGASGDEGPFGGAGERQYRR
Nucleotide Sequence ATGACGGGAGGAGCGGCATCTGCTTCTCACAAGCCATCTGGGTCCATGGGGGTGTGTCAGGCTATCTTGTCTTACACACGCCTCCCTCTCTGCACAGGTGGAGCTTCTGGTGATGAAGGCCCTTTCGGTGGGGCTGGTGAAAGGCAGTATAGACGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab