CircRNA Information

General Information
circRNA Basic Information
CircID chr11:290838|291162
Strand +
CircType exon
Host Gene ENSG00000142102.14;
Algorism CIRI2;
Sequence CTCCATGTGTCGCCTGCTGTGTGGCTGGTGCTGGGTGTACAGTGCTCACCTGGTCCCAGAAGACGTGGCCCCAGTAGCATTCCTCACGGCTCCCATTGGAGAGGCCCCCAGGACTGAGGCCATGGCAGATGTATCCTGGGGCCTTGGGCTGGGGCAGGGCACTGAGCAGGTAGTAGAGGGAGCCACGCAGGGCCTGGCGCAGCTGCAGGGGCCCCACCACGTCCAAGCCACATTCTACCCAGAGCTGGGCCCAGGCCTGTGCGTGAGCCGTATACAGAGCTCCCCTGGCCTGCAGCTGCAGGGCCTCAGTGAGGCAGGCCTGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:290838|291162 hsa-miR-29a-5p 0 0 1
chr11:290838|291162 hsa-miR-29a-3p 0 0 1
chr11:290838|291162 hsa-miR-148a-5p 0 0 1
chr11:290838|291162 hsa-miR-148a-3p 0 0 1
chr11:290838|291162 hsa-miR-214-5p 0 0 1
chr11:290838|291162 hsa-miR-214-3p 0 0 1
chr11:290838|291162 hsa-miR-152-5p 0 0 1
chr11:290838|291162 hsa-miR-152-3p 0 0 1
chr11:290838|291162 hsa-miR-29c-5p 0 0 1
chr11:290838|291162 hsa-miR-29c-3p 0 0 1
chr11:290838|291162 hsa-miR-326 0 0 1
chr11:290838|291162 hsa-miR-148b-5p 0 0 1
chr11:290838|291162 hsa-miR-148b-3p 0 0 1
chr11:290838|291162 hsa-miR-637 1 1 1
chr11:290838|291162 hsa-miR-661 0 1 1
chr11:290838|291162 hsa-miR-1301-5p 0 0 1
chr11:290838|291162 hsa-miR-1301-3p 0 0 1
chr11:290838|291162 hsa-miR-874-5p 0 0 1
chr11:290838|291162 hsa-miR-874-3p 0 0 1
chr11:290838|291162 hsa-miR-541-5p 0 0 1
chr11:290838|291162 hsa-miR-541-3p 0 0 1
chr11:290838|291162 hsa-miR-920 0 1 1
chr11:290838|291162 hsa-miR-939-5p 0 0 1
chr11:290838|291162 hsa-miR-939-3p 0 0 1
chr11:290838|291162 hsa-miR-1226-5p 0 0 1
chr11:290838|291162 hsa-miR-1226-3p 0 0 1
chr11:290838|291162 hsa-miR-1205 0 0 1
chr11:290838|291162 hsa-miR-1291 0 1 1
chr11:290838|291162 hsa-miR-125a-3p 0 0 1
chr11:290838|291162 hsa-miR-296-5p 0 0 1
chr11:290838|291162 hsa-miR-146b-3p 0 0 1
chr11:290838|291162 hsa-miR-1184 0 1 1
chr11:290838|291162 hsa-miR-654-5p 0 0 1
chr11:290838|291162 hsa-miR-767-3p 0 0 1
chr11:290838|291162 hsa-miR-324-3p 0 0 1
chr11:290838|291162 hsa-miR-330-5p 0 1 1
chr11:290838|291162 hsa-miR-455-3p 0 0 1
chr11:290838|291162 hsa-miR-515-5p 0 0 1
chr11:290838|291162 hsa-miR-642 0 0 1
chr11:290838|291162 hsa-miR-1273 0 0 1
chr11:290838|291162 hsa-miR-29b 0 0 1
chr11:290838|291162 hsa-miR-206 1 0 0
chr11:290838|291162 hsa-miR-612 1 0 0
chr11:290838|291162 hsa-miR-761 0 1 0
chr11:290838|291162 hsa-miR-760 1 1 0
chr11:290838|291162 hsa-miR-3132 0 1 0
chr11:290838|291162 hsa-miR-3155a 0 1 0
chr11:290838|291162 hsa-miR-3195 1 0 0
chr11:290838|291162 hsa-miR-1268b 1 0 0
chr11:290838|291162 hsa-miR-4420 0 1 0
chr11:290838|291162 hsa-miR-4466 1 0 0
chr11:290838|291162 hsa-miR-4469 1 1 0
chr11:290838|291162 hsa-miR-3155b 0 1 0
chr11:290838|291162 hsa-miR-4538 1 1 0
chr11:290838|291162 hsa-miR-3960 1 0 0
chr11:290838|291162 hsa-miR-4658 1 0 0
chr11:290838|291162 hsa-miR-4660 0 1 0
chr11:290838|291162 hsa-miR-4734 1 0 0
chr11:290838|291162 hsa-miR-5047 0 1 0
chr11:290838|291162 hsa-miR-6090 1 0 0
chr11:290838|291162 hsa-miR-8089 1 0 0
chr11:290838|291162 hsa-miR-11401 0 1 0
chr11:290838|291162 hsa-miR-4731-5p 1 0 0
chr11:290838|291162 hsa-miR-6747-3p 0 1 0
chr11:290838|291162 hsa-miR-6861-5p 1 1 0
chr11:290838|291162 hsa-miR-1972 0 1 0
chr11:290838|291162 hsa-miR-766-3p 0 1 0
chr11:290838|291162 hsa-miR-1227-5p 0 1 0
chr11:290838|291162 hsa-miR-6089 1 0 0
chr11:290838|291162 hsa-miR-4755-3p 0 1 0
chr11:290838|291162 hsa-miR-593-5p 0 1 0
chr11:290838|291162 hsa-miR-7160-5p 1 0 0
chr11:290838|291162 hsa-miR-6762-3p 1 0 0
chr11:290838|291162 hsa-miR-4474-3p 0 1 0
chr11:290838|291162 hsa-miR-197-5p 1 1 0
chr11:290838|291162 hsa-miR-6841-3p 0 1 0
chr11:290838|291162 hsa-miR-7108-5p 1 0 0
chr11:290838|291162 hsa-miR-423-3p 1 0 0
chr11:290838|291162 hsa-miR-6871-5p 0 1 0
chr11:290838|291162 hsa-miR-6868-3p 0 1 0
chr11:290838|291162 hsa-miR-2467-5p 1 0 0
chr11:290838|291162 hsa-miR-6827-5p 1 1 0
chr11:290838|291162 hsa-miR-6798-5p 1 0 0
chr11:290838|291162 hsa-miR-3194-5p 0 1 0
chr11:290838|291162 hsa-miR-6728-3p 1 0 0
chr11:290838|291162 hsa-miR-6821-5p 1 0 0
chr11:290838|291162 hsa-miR-5008-5p 0 1 0
chr11:290838|291162 hsa-miR-3934-3p 0 1 0
chr11:290838|291162 hsa-miR-1343-3p 0 1 0
chr11:290838|291162 hsa-miR-4763-5p 0 1 0
chr11:290838|291162 hsa-miR-1229-5p 1 1 0
chr11:290838|291162 hsa-miR-4640-5p 1 1 0
chr11:290838|291162 hsa-miR-5001-3p 0 1 0
chr11:290838|291162 hsa-miR-7113-3p 1 0 0
chr11:290838|291162 hsa-miR-4650-3p 1 1 0
chr11:290838|291162 hsa-miR-4690-5p 0 1 0
chr11:290838|291162 hsa-miR-6749-5p 1 0 0
chr11:290838|291162 hsa-miR-1266-3p 1 1 0
chr11:290838|291162 hsa-miR-1304-3p 0 1 0
chr11:290838|291162 hsa-miR-6824-5p 1 0 0
chr11:290838|291162 hsa-miR-6789-5p 1 0 0
chr11:290838|291162 hsa-miR-7850-5p 0 1 0
chr11:290838|291162 hsa-miR-3065-3p 0 1 0
chr11:290838|291162 hsa-miR-3922-5p 0 1 0
chr11:290838|291162 hsa-miR-1225-5p 1 0 0
chr11:290838|291162 hsa-miR-7106-3p 1 1 0
chr11:290838|291162 hsa-miR-1910-5p 1 0 0
chr11:290838|291162 hsa-miR-6741-3p 1 0 0
chr11:290838|291162 hsa-miR-6752-3p 0 1 0
chr11:290838|291162 hsa-miR-6837-3p 0 1 0
chr11:290838|291162 hsa-miR-6826-3p 1 0 0
chr11:290838|291162 hsa-miR-328-3p 1 0 0
chr11:290838|291162 hsa-miR-4649-3p 0 1 0
chr11:290838|291162 hsa-miR-3173-5p 0 1 0
chr11:290838|291162 hsa-miR-371b-3p 0 1 0
chr11:290838|291162 hsa-miR-5007-5p 1 0 0
chr11:290838|291162 hsa-miR-409-3p 1 0 0
chr11:290838|291162 hsa-miR-4520-5p 0 1 0
chr11:290838|291162 hsa-miR-4650-5p 0 1 0
chr11:290838|291162 hsa-miR-4763-3p 1 0 0
chr11:290838|291162 hsa-miR-1343-5p 1 0 0
chr11:290838|291162 hsa-miR-6752-5p 1 0 0
chr11:290838|291162 hsa-miR-6803-5p 1 0 0
chr11:290838|291162 hsa-miR-6851-5p 1 0 0
chr11:290838|291162 hsa-miR-6774-5p 1 1 0
chr11:290838|291162 hsa-miR-7111-5p 1 0 0
chr11:290838|291162 hsa-miR-4685-3p 1 0 0
chr11:290838|291162 hsa-miR-328-5p 1 0 0
chr11:290838|291162 hsa-miR-4649-5p 1 0 0
chr11:290838|291162 hsa-miR-4726-5p 0 1 0
chr11:290838|291162 hsa-miR-4745-5p 1 0 0
chr11:290838|291162 hsa-miR-6846-5p 1 0 0
chr11:290838|291162 hsa-miR-6848-5p 1 0 0
chr11:290838|291162 hsa-miR-3187-5p 1 0 0
chr11:290838|291162 hsa-miR-6885-5p 1 0 0
chr11:290838|291162 hsa-miR-6511b-5p 0 1 0
chr11:290838|291162 hsa-miR-6799-3p 1 1 0
chr11:290838|291162 hsa-miR-1271-3p 1 0 0
chr11:290838|291162 hsa-miR-6773-5p 0 1 0
chr11:290838|291162 hsa-miR-6790-5p 1 0 0
chr11:290838|291162 hsa-miR-5591-5p 0 1 0
chr11:290838|291162 hsa-miR-6724-5p 1 1 0
chr11:290838|291162 hsa-miR-10398-5p 1 1 0
chr11:290838|291162 hsa-miR-6791-5p 1 0 0
chr11:290838|291162 hsa-miR-6762-5p 0 1 0
chr11:290838|291162 hsa-miR-6805-3p 0 1 0
chr11:290838|291162 hsa-miR-6775-3p 1 1 0
chr11:290838|291162 hsa-miR-3059-5p 1 0 0
chr11:290838|291162 hsa-miR-6744-3p 0 1 0
chr11:290838|291162 hsa-miR-6783-3p 0 1 0
chr11:290838|291162 hsa-miR-10394-5p 0 1 0
chr11:290838|291162 hsa-miR-619-5p 1 0 0
chr11:290838|291162 hsa-miR-3619-5p 0 1 0
chr11:290838|291162 hsa-miR-4690-3p 0 1 0
chr11:290838|291162 hsa-miR-4769-3p 0 1 0
chr11:290838|291162 hsa-miR-6811-5p 0 1 0
chr11:290838|291162 hsa-miR-7155-3p 0 1 0
chr11:290838|291162 hsa-miR-4789-3p 1 0 0
chr11:290838|291162 hsa-miR-519e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:290838|291162
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MVLGVQCSPGPRRRGPSSIPHGSHWRGPQD
Nucleotide Sequence CTGGTGCTGGGTGTACAGTGCTCACCTGGTCCCAGAAGACGTGGCCCCAGTAGCATTCCTCACGGCTCCCATTGGAGAGGCCCCCAGGACTGA
CircID chr11:290838|291162
ORF Type ORF2
Protein Length 107
Nucleotide Length 321
Protein Sequence MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLS
Nucleotide Sequence ATGTGTCGCCTGCTGTGTGGCTGGTGCTGGGTGTACAGTGCTCACCTGGTCCCAGAAGACGTGGCCCCAGTAGCATTCCTCACGGCTCCCATTGGAGAGGCCCCCAGGACTGAGGCCATGGCAGATGTATCCTGGGGCCTTGGGCTGGGGCAGGGCACTGAGCAGGTAGTAGAGGGAGCCACGCAGGGCCTGGCGCAGCTGCAGGGGCCCCACCACGTCCAAGCCACATTCTACCCAGAGCTGGGCCCAGGCCTGTGCGTGAGCCGTATACAGAGCTCCCCTGGCCTGCAGCTGCAGGGCCTCAGTGAGGCAGGCCTGAGC
CircID chr11:290838|291162
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MERPPGLRPWQMYPGALGWGRALSR
Nucleotide Sequence TTGGAGAGGCCCCCAGGACTGAGGCCATGGCAGATGTATCCTGGGGCCTTGGGCTGGGGCAGGGCACTGAGCAGGTAG
CircID chr11:290838|291162
ORF Type ORF4
Protein Length 100
Nucleotide Length 300
Protein Sequence MQLQARGALYTAHAQAWAQLWVECGLDVVGPLQLRQALRGSLYYLLSALPQPKAPGYICHGLSPGGLSNGSREECYWGHVFWDQVSTVHPAPATQQATHG
Nucleotide Sequence CTGCAGCTGCAGGCCAGGGGAGCTCTGTATACGGCTCACGCACAGGCCTGGGCCCAGCTCTGGGTAGAATGTGGCTTGGACGTGGTGGGGCCCCTGCAGCTGCGCCAGGCCCTGCGTGGCTCCCTCTACTACCTGCTCAGTGCCCTGCCCCAGCCCAAGGCCCCAGGATACATCTGCCATGGCCTCAGTCCTGGGGGCCTCTCCAATGGGAGCCGTGAGGAATGCTACTGGGGCCACGTCTTCTGGGACCAGGTGAGCACTGTACACCCAGCACCAGCCACACAGCAGGCGACACATGGA
CircID chr11:290838|291162
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MASVLGASPMGAVRNATGATSSGTR
Nucleotide Sequence ATGGCCTCAGTCCTGGGGGCCTCTCCAATGGGAGCCGTGAGGAATGCTACTGGGGCCACGTCTTCTGGGACCAGGTGA
CircID chr11:290838|291162
ORF Type ORF6
Protein Length 56
Nucleotide Length 171
Protein Sequence MGPALGRMWLGRGGAPAAAPGPAWLPLLPAQCPAPAQGPRIHLPWPQSWGPLQWEP
Nucleotide Sequence CTGGGCCCAGCTCTGGGTAGAATGTGGCTTGGACGTGGTGGGGCCCCTGCAGCTGCGCCAGGCCCTGCGTGGCTCCCTCTACTACCTGCTCAGTGCCCTGCCCCAGCCCAAGGCCCCAGGATACATCTGCCATGGCCTCAGTCCTGGGGGCCTCTCCAATGGGAGCCGTGA
CircID chr11:290838|291162
ORF Type ORF7
Protein Length 26
Nucleotide Length 78
Protein Sequence MLLGPRLLGPGEHCTPSTSHTAGDTW
Nucleotide Sequence ATGCTACTGGGGCCACGTCTTCTGGGACCAGGTGAGCACTGTACACCCAGCACCAGCCACACAGCAGGCGACACATGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab