CircRNA Information

General Information
circRNA Basic Information
CircID chr11:294824|295058
Strand -
CircType exon
Host Gene ENSG00000142102.14;
Algorism CIRI2;
Sequence CCTCCTAGCCTGCCATCCCTCACCTGCAGCCAGGCTCTCAGGGAAGGTCCATGCTGCTTGGCCTGAGTTCAAGGCTTTCTGCCTGTAGCCTGGACTCCCGTGGACCCCCGTGGGCAGGTGGCTTCCCCGTGGCATCTCCACACCGCCTCTGCCTGCCCCTGTGGACTGATGCTATCGCGCACCGTCCCACGACCCCACCCCGAGCTCCTGAAGCCGGGGTCTGAGCCTGCATCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:294824|295058 hsa-miR-15a-5p 0 0 1
chr11:294824|295058 hsa-miR-15a-3p 0 0 1
chr11:294824|295058 hsa-miR-107 0 0 1
chr11:294824|295058 hsa-miR-15b-5p 0 0 1
chr11:294824|295058 hsa-miR-15b-3p 0 0 1
chr11:294824|295058 hsa-miR-195-5p 0 0 1
chr11:294824|295058 hsa-miR-195-3p 0 0 1
chr11:294824|295058 hsa-miR-424-5p 0 0 1
chr11:294824|295058 hsa-miR-424-3p 0 0 1
chr11:294824|295058 hsa-miR-484 0 1 1
chr11:294824|295058 hsa-miR-492 0 0 1
chr11:294824|295058 hsa-miR-497-5p 0 0 1
chr11:294824|295058 hsa-miR-497-3p 0 0 1
chr11:294824|295058 hsa-miR-510-5p 0 0 1
chr11:294824|295058 hsa-miR-510-3p 0 0 1
chr11:294824|295058 hsa-miR-604 0 0 1
chr11:294824|295058 hsa-miR-608 1 1 1
chr11:294824|295058 hsa-miR-620 0 0 1
chr11:294824|295058 hsa-miR-647 0 0 1
chr11:294824|295058 hsa-miR-657 0 0 1
chr11:294824|295058 hsa-miR-708-5p 0 0 1
chr11:294824|295058 hsa-miR-708-3p 0 0 1
chr11:294824|295058 hsa-miR-1205 0 0 1
chr11:294824|295058 hsa-miR-1270 0 1 1
chr11:294824|295058 hsa-miR-671-5p 0 1 1
chr11:294824|295058 hsa-miR-125a-3p 1 1 1
chr11:294824|295058 hsa-miR-486-3p 0 0 1
chr11:294824|295058 hsa-miR-615-5p 1 1 1
chr11:294824|295058 hsa-miR-1289 0 1 1
chr11:294824|295058 hsa-miR-28-5p 0 0 1
chr11:294824|295058 hsa-miR-1207-5p 0 0 1
chr11:294824|295058 hsa-miR-125a-5p 0 1 1
chr11:294824|295058 hsa-miR-455-3p 0 1 1
chr11:294824|295058 hsa-miR-1274a 0 0 1
chr11:294824|295058 hsa-miR-125b 0 0 1
chr11:294824|295058 hsa-miR-103 0 0 1
chr11:294824|295058 hsa-miR-16 0 0 1
chr11:294824|295058 hsa-miR-220c 0 0 1
chr11:294824|295058 hsa-miR-24 0 0 1
chr11:294824|295058 hsa-miR-762 1 0 0
chr11:294824|295058 hsa-miR-1183 1 0 0
chr11:294824|295058 hsa-miR-1293 1 0 0
chr11:294824|295058 hsa-miR-1268a 1 0 0
chr11:294824|295058 hsa-miR-1275 1 0 0
chr11:294824|295058 hsa-miR-2861 1 0 0
chr11:294824|295058 hsa-miR-3141 1 0 0
chr11:294824|295058 hsa-miR-3196 1 0 0
chr11:294824|295058 hsa-miR-4324 0 1 0
chr11:294824|295058 hsa-miR-3652 1 0 0
chr11:294824|295058 hsa-miR-3665 1 1 0
chr11:294824|295058 hsa-miR-3911 1 1 0
chr11:294824|295058 hsa-miR-1268b 1 0 0
chr11:294824|295058 hsa-miR-4440 0 1 0
chr11:294824|295058 hsa-miR-4466 1 0 0
chr11:294824|295058 hsa-miR-4514 0 1 0
chr11:294824|295058 hsa-miR-4525 0 1 0
chr11:294824|295058 hsa-miR-1587 1 0 0
chr11:294824|295058 hsa-miR-3960 1 0 0
chr11:294824|295058 hsa-miR-4651 1 1 0
chr11:294824|295058 hsa-miR-4673 0 1 0
chr11:294824|295058 hsa-miR-4674 1 0 0
chr11:294824|295058 hsa-miR-4688 1 1 0
chr11:294824|295058 hsa-miR-4692 0 1 0
chr11:294824|295058 hsa-miR-4710 1 1 0
chr11:294824|295058 hsa-miR-5787 1 0 0
chr11:294824|295058 hsa-miR-6085 1 0 0
chr11:294824|295058 hsa-miR-7150 0 1 0
chr11:294824|295058 hsa-miR-7704 1 0 0
chr11:294824|295058 hsa-miR-8072 1 0 0
chr11:294824|295058 hsa-miR-8073 1 0 0
chr11:294824|295058 hsa-miR-12128 1 0 0
chr11:294824|295058 hsa-miR-6734-5p 1 0 0
chr11:294824|295058 hsa-miR-4433a-3p 1 1 0
chr11:294824|295058 hsa-miR-6765-5p 1 0 0
chr11:294824|295058 hsa-miR-6825-5p 1 0 0
chr11:294824|295058 hsa-miR-1972 0 1 0
chr11:294824|295058 hsa-miR-4687-3p 1 0 0
chr11:294824|295058 hsa-miR-4708-5p 0 1 0
chr11:294824|295058 hsa-miR-6728-5p 1 1 0
chr11:294824|295058 hsa-miR-7114-5p 1 0 0
chr11:294824|295058 hsa-miR-6757-5p 0 1 0
chr11:294824|295058 hsa-miR-6880-5p 1 0 0
chr11:294824|295058 hsa-miR-7847-3p 1 0 0
chr11:294824|295058 hsa-miR-6727-5p 1 0 0
chr11:294824|295058 hsa-miR-6806-5p 1 0 0
chr11:294824|295058 hsa-miR-6776-5p 1 0 0
chr11:294824|295058 hsa-miR-6742-5p 1 0 0
chr11:294824|295058 hsa-miR-3151-5p 1 0 0
chr11:294824|295058 hsa-miR-3180-3p 1 0 0
chr11:294824|295058 hsa-miR-6793-5p 1 0 0
chr11:294824|295058 hsa-miR-6796-5p 1 0 0
chr11:294824|295058 hsa-miR-2467-3p 1 1 0
chr11:294824|295058 hsa-miR-6782-5p 1 0 0
chr11:294824|295058 hsa-miR-6786-5p 1 0 0
chr11:294824|295058 hsa-miR-1226-5p 1 0 0
chr11:294824|295058 hsa-miR-6784-5p 1 0 0
chr11:294824|295058 hsa-miR-1228-5p 1 0 0
chr11:294824|295058 hsa-miR-92b-5p 1 1 0
chr11:294824|295058 hsa-miR-6749-5p 1 0 0
chr11:294824|295058 hsa-miR-659-5p 0 1 0
chr11:294824|295058 hsa-miR-149-3p 1 0 0
chr11:294824|295058 hsa-miR-6717-5p 1 0 0
chr11:294824|295058 hsa-miR-6824-5p 1 0 0
chr11:294824|295058 hsa-miR-6789-5p 1 0 0
chr11:294824|295058 hsa-miR-6886-5p 1 0 0
chr11:294824|295058 hsa-miR-5010-5p 0 1 0
chr11:294824|295058 hsa-miR-4707-5p 1 1 0
chr11:294824|295058 hsa-miR-1307-3p 1 0 0
chr11:294824|295058 hsa-miR-4746-3p 1 0 0
chr11:294824|295058 hsa-miR-670-5p 0 1 0
chr11:294824|295058 hsa-miR-5007-5p 1 1 0
chr11:294824|295058 hsa-miR-1233-5p 1 0 0
chr11:294824|295058 hsa-miR-4763-3p 1 1 0
chr11:294824|295058 hsa-miR-6769b-5p 1 0 0
chr11:294824|295058 hsa-miR-6778-5p 1 0 0
chr11:294824|295058 hsa-miR-6787-5p 1 0 0
chr11:294824|295058 hsa-miR-6812-5p 1 0 0
chr11:294824|295058 hsa-miR-6816-5p 1 0 0
chr11:294824|295058 hsa-miR-6893-5p 0 1 0
chr11:294824|295058 hsa-miR-1343-5p 1 0 0
chr11:294824|295058 hsa-miR-6726-5p 1 0 0
chr11:294824|295058 hsa-miR-6743-5p 1 1 0
chr11:294824|295058 hsa-miR-6752-5p 1 0 0
chr11:294824|295058 hsa-miR-6756-5p 1 1 0
chr11:294824|295058 hsa-miR-6803-5p 1 0 0
chr11:294824|295058 hsa-miR-6813-5p 1 0 0
chr11:294824|295058 hsa-miR-6819-5p 1 0 0
chr11:294824|295058 hsa-miR-7110-5p 1 0 0
chr11:294824|295058 hsa-miR-10401-5p 1 0 0
chr11:294824|295058 hsa-miR-6722-3p 1 0 0
chr11:294824|295058 hsa-miR-6751-5p 1 0 0
chr11:294824|295058 hsa-miR-6808-5p 0 1 0
chr11:294824|295058 hsa-miR-6879-5p 1 0 0
chr11:294824|295058 hsa-miR-7111-5p 1 0 0
chr11:294824|295058 hsa-miR-4755-5p 1 1 0
chr11:294824|295058 hsa-miR-3620-5p 1 0 0
chr11:294824|295058 hsa-miR-6780b-5p 1 0 0
chr11:294824|295058 hsa-miR-1237-5p 1 0 0
chr11:294824|295058 hsa-miR-1909-3p 1 0 0
chr11:294824|295058 hsa-miR-328-5p 1 0 0
chr11:294824|295058 hsa-miR-4649-5p 1 0 0
chr11:294824|295058 hsa-miR-4725-3p 0 1 0
chr11:294824|295058 hsa-miR-4745-5p 1 0 0
chr11:294824|295058 hsa-miR-6729-5p 1 0 0
chr11:294824|295058 hsa-miR-6738-5p 1 0 0
chr11:294824|295058 hsa-miR-675-5p 1 0 0
chr11:294824|295058 hsa-miR-6848-5p 1 0 0
chr11:294824|295058 hsa-miR-4436b-3p 0 1 0
chr11:294824|295058 hsa-miR-939-5p 1 0 0
chr11:294824|295058 hsa-miR-4769-5p 1 0 0
chr11:294824|295058 hsa-miR-1910-3p 0 1 0
chr11:294824|295058 hsa-miR-6511a-5p 0 1 0
chr11:294824|295058 hsa-miR-6511b-5p 1 1 0
chr11:294824|295058 hsa-miR-1914-3p 1 0 0
chr11:294824|295058 hsa-miR-4665-5p 1 0 0
chr11:294824|295058 hsa-miR-6855-5p 1 0 0
chr11:294824|295058 hsa-miR-7151-3p 0 1 0
chr11:294824|295058 hsa-miR-6791-5p 1 0 0
chr11:294824|295058 hsa-miR-4524a-5p 0 1 0
chr11:294824|295058 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:294824|295058
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MPVAWTPVDPRGQVASPWHLHTASACPCGLMLSRTVPRPHPELLKPGSEPAS
Nucleotide Sequence CTGCCTGTAGCCTGGACTCCCGTGGACCCCCGTGGGCAGGTGGCTTCCCCGTGGCATCTCCACACCGCCTCTGCCTGCCCCTGTGGACTGATGCTATCGCGCACCGTCCCACGACCCCACCCCGAGCTCCTGAAGCCGGGGTCTGAGCCTGCATCA
CircID chr11:294824|295058
ORF Type ORF2
Protein Length 66
Nucleotide Length 201
Protein Sequence MQPGSQGRSMLLGLSSRLSACSLDSRGPPWAGGFPVASPHRLCLPLWTDAIAHRPTTPPRAPEAGV
Nucleotide Sequence CTGCAGCCAGGCTCTCAGGGAAGGTCCATGCTGCTTGGCCTGAGTTCAAGGCTTTCTGCCTGTAGCCTGGACTCCCGTGGACCCCCGTGGGCAGGTGGCTTCCCCGTGGCATCTCCACACCGCCTCTGCCTGCCCCTGTGGACTGATGCTATCGCGCACCGTCCCACGACCCCACCCCGAGCTCCTGAAGCCGGGGTCTGA
CircID chr11:294824|295058
ORF Type ORF3
Protein Length 64
Nucleotide Length 195
Protein Sequence MQAQTPASGARGGVVGRCAIASVHRGRQRRCGDATGKPPAHGGPRESRLQAESLELRPSSMDLP
Nucleotide Sequence ATGCAGGCTCAGACCCCGGCTTCAGGAGCTCGGGGTGGGGTCGTGGGACGGTGCGCGATAGCATCAGTCCACAGGGGCAGGCAGAGGCGGTGTGGAGATGCCACGGGGAAGCCACCTGCCCACGGGGGTCCACGGGAGTCCAGGCTACAGGCAGAAAGCCTTGAACTCAGGCCAAGCAGCATGGACCTTCCCTGA
CircID chr11:294824|295058
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MPRGSHLPTGVHGSPGYRQKALNSGQAAWTFPESLAAGEGWQARR
Nucleotide Sequence ATGCCACGGGGAAGCCACCTGCCCACGGGGGTCCACGGGAGTCCAGGCTACAGGCAGAAAGCCTTGAACTCAGGCCAAGCAGCATGGACCTTCCCTGAGAGCCTGGCTGCAGGTGAGGGATGGCAGGCTAGGAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab