CircRNA Information

General Information
circRNA Basic Information
CircID chr11:33336643|33336845
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGCTAGTTCAATTTCATCTCTTACCATTCTCTGTTAGTGACCCTCTGTACTTCCAGTCTTTGAATGTGAGGTTATTCTCTCTTGATTTTCTATATTTACACATACTATAACCTTGGCATAGTTTTTCTCCCCACTCTTTCAGTGCAAACTCCTATTTGTCCTTTAACACCAAACTTGAGGACCACCTCTTCTAGAATTTTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:33336643|33336845 hsa-miR-23a-5p 0 0 1
chr11:33336643|33336845 hsa-miR-23a-3p 0 0 1
chr11:33336643|33336845 hsa-miR-181c-5p 0 0 1
chr11:33336643|33336845 hsa-miR-181c-3p 0 0 1
chr11:33336643|33336845 hsa-miR-23b-5p 0 0 1
chr11:33336643|33336845 hsa-miR-23b-3p 0 0 1
chr11:33336643|33336845 hsa-miR-143-5p 0 0 1
chr11:33336643|33336845 hsa-miR-143-3p 0 0 1
chr11:33336643|33336845 hsa-miR-154-5p 0 0 1
chr11:33336643|33336845 hsa-miR-154-3p 0 0 1
chr11:33336643|33336845 hsa-miR-335-5p 0 0 1
chr11:33336643|33336845 hsa-miR-335-3p 0 0 1
chr11:33336643|33336845 hsa-miR-181d-5p 0 0 1
chr11:33336643|33336845 hsa-miR-181d-3p 0 0 1
chr11:33336643|33336845 hsa-miR-507 0 0 1
chr11:33336643|33336845 hsa-miR-557 1 0 1
chr11:33336643|33336845 hsa-miR-939-5p 0 0 1
chr11:33336643|33336845 hsa-miR-939-3p 0 0 1
chr11:33336643|33336845 hsa-miR-491-5p 0 0 1
chr11:33336643|33336845 hsa-miR-518d-5p 0 0 1
chr11:33336643|33336845 hsa-miR-519b-5p 0 0 1
chr11:33336643|33336845 hsa-miR-519c-5p 0 0 1
chr11:33336643|33336845 hsa-miR-520c-5p 0 0 1
chr11:33336643|33336845 hsa-miR-323-5p 0 0 1
chr11:33336643|33336845 hsa-miR-181a 0 0 1
chr11:33336643|33336845 hsa-miR-181b 0 0 1
chr11:33336643|33336845 hsa-miR-526a 0 0 1
chr11:33336643|33336845 hsa-miR-1182 1 0 0
chr11:33336643|33336845 hsa-miR-1293 1 0 0
chr11:33336643|33336845 hsa-miR-3175 1 1 0
chr11:33336643|33336845 hsa-miR-3652 1 0 0
chr11:33336643|33336845 hsa-miR-4490 1 0 0
chr11:33336643|33336845 hsa-miR-3976 0 1 0
chr11:33336643|33336845 hsa-miR-4706 1 0 0
chr11:33336643|33336845 hsa-miR-4739 1 0 0
chr11:33336643|33336845 hsa-miR-5739 1 0 0
chr11:33336643|33336845 hsa-miR-8085 1 0 0
chr11:33336643|33336845 hsa-miR-134-5p 1 0 0
chr11:33336643|33336845 hsa-miR-4433b-3p 1 1 0
chr11:33336643|33336845 hsa-miR-4433a-3p 1 0 0
chr11:33336643|33336845 hsa-miR-3150a-3p 1 0 0
chr11:33336643|33336845 hsa-miR-6867-5p 1 1 0
chr11:33336643|33336845 hsa-miR-6746-5p 1 0 0
chr11:33336643|33336845 hsa-miR-4653-3p 1 0 0
chr11:33336643|33336845 hsa-miR-4709-3p 1 0 0
chr11:33336643|33336845 hsa-miR-6871-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6782-5p 1 0 0
chr11:33336643|33336845 hsa-miR-4793-3p 1 0 0
chr11:33336643|33336845 hsa-miR-5006-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6786-5p 1 0 0
chr11:33336643|33336845 hsa-miR-7109-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6740-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6847-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6878-5p 1 1 0
chr11:33336643|33336845 hsa-miR-6818-5p 1 1 0
chr11:33336643|33336845 hsa-miR-6870-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6756-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6819-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6763-5p 1 0 0
chr11:33336643|33336845 hsa-miR-4728-5p 1 0 0
chr11:33336643|33336845 hsa-miR-328-5p 1 0 0
chr11:33336643|33336845 hsa-miR-4745-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6795-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6887-5p 1 0 0
chr11:33336643|33336845 hsa-miR-1238-5p 1 0 0
chr11:33336643|33336845 hsa-miR-4758-5p 1 0 0
chr11:33336643|33336845 hsa-miR-6758-5p 1 0 0
chr11:33336643|33336845 hsa-miR-7161-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:33336643|33336845
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence LLVQFHLLPFSVSDPLYFQSLNVRLFSLDFLYLHIL
Nucleotide Sequence CTGCTAGTTCAATTTCATCTCTTACCATTCTCTGTTAGTGACCCTCTGTACTTCCAGTCTTTGAATGTGAGGTTATTCTCTCTTGATTTTCTATATTTACACATACTATAA

CircID chr11:33336643|33336845
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MIFYIYTYYNLGIVFLPTLSVQTPICPLTPNLRTTSSRIL
Nucleotide Sequence TTGATTTTCTATATTTACACATACTATAACCTTGGCATAGTTTTTCTCCCCACTCTTTCAGTGCAAACTCCTATTTGTCCTTTAACACCAAACTTGAGGACCACCTCTTCTAGAATTTTA

CircID chr11:33336643|33336845
ORF Type ORF3
Protein Length 42
Nucleotide Length 129
Protein Sequence MKEWGEKLCQGYSMCKYRKSRENNLTFKDWKYRGSLTENGKR
Nucleotide Sequence CTGAAAGAGTGGGGAGAAAAACTATGCCAAGGTTATAGTATGTGTAAATATAGAAAATCAAGAGAGAATAACCTCACATTCAAAGACTGGAAGTACAGAGGGTCACTAACAGAGAATGGTAAGAGATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites