CircRNA Information

General Information
circRNA Basic Information
CircID chr11:3359232|3359483
Strand +
CircType exon
Host Gene ENSG00000005801.15;
Algorism CIRI2;
Sequence CTCACTAAGCATAAGAAAACCCATACTGGAGAGAAGCCCTACAAATGTGACGAATGTGGAAAAAACTTTACCCAGTCCTCCAACCTTATTGTACATAAGAGAATTCATACTGGAGAGAAACCCTACAAGTGTGAAGAATGTGGCAGAGTCTTCATGTGGTTCTCAGACATTACCAAACATAAGAAAACCCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGAAAAAACTTTACCCAGTCCTCAAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:3359232|3359483 hsa-miR-23a-5p 0 0 1
chr11:3359232|3359483 hsa-miR-23a-3p 0 0 1
chr11:3359232|3359483 hsa-miR-23b-5p 0 0 1
chr11:3359232|3359483 hsa-miR-23b-3p 0 0 1
chr11:3359232|3359483 hsa-miR-146a-5p 0 0 1
chr11:3359232|3359483 hsa-miR-146a-3p 0 0 1
chr11:3359232|3359483 hsa-miR-377-5p 0 0 1
chr11:3359232|3359483 hsa-miR-377-3p 0 0 1
chr11:3359232|3359483 hsa-miR-412-5p 0 0 1
chr11:3359232|3359483 hsa-miR-412-3p 0 0 1
chr11:3359232|3359483 hsa-miR-555 0 0 1
chr11:3359232|3359483 hsa-miR-561-5p 0 0 1
chr11:3359232|3359483 hsa-miR-561-3p 0 0 1
chr11:3359232|3359483 hsa-miR-589-5p 0 0 1
chr11:3359232|3359483 hsa-miR-589-3p 0 0 1
chr11:3359232|3359483 hsa-miR-629-5p 0 0 1
chr11:3359232|3359483 hsa-miR-629-3p 0 0 1
chr11:3359232|3359483 hsa-miR-766-5p 0 0 1
chr11:3359232|3359483 hsa-miR-766-3p 0 0 1
chr11:3359232|3359483 hsa-miR-765 0 0 1
chr11:3359232|3359483 hsa-miR-921 0 0 1
chr11:3359232|3359483 hsa-miR-942-5p 0 0 1
chr11:3359232|3359483 hsa-miR-942-3p 0 0 1
chr11:3359232|3359483 hsa-miR-1304-5p 0 0 1
chr11:3359232|3359483 hsa-miR-1304-3p 0 0 1
chr11:3359232|3359483 hsa-miR-770-5p 0 0 1
chr11:3359232|3359483 hsa-miR-1224-5p 0 1 1
chr11:3359232|3359483 hsa-miR-296-3p 0 0 1
chr11:3359232|3359483 hsa-miR-654-3p 0 1 1
chr11:3359232|3359483 hsa-miR-338-5p 0 0 1
chr11:3359232|3359483 hsa-miR-146b-5p 0 0 1
chr11:3359232|3359483 hsa-miR-768-5p 0 0 1
chr11:3359232|3359483 hsa-miR-762 1 0 0
chr11:3359232|3359483 hsa-miR-3131 1 1 0
chr11:3359232|3359483 hsa-miR-3921 0 1 0
chr11:3359232|3359483 hsa-miR-4432 0 1 0
chr11:3359232|3359483 hsa-miR-4463 1 0 0
chr11:3359232|3359483 hsa-miR-4507 1 0 0
chr11:3359232|3359483 hsa-miR-4522 0 1 0
chr11:3359232|3359483 hsa-miR-1587 1 0 0
chr11:3359232|3359483 hsa-miR-4651 1 0 0
chr11:3359232|3359483 hsa-miR-6861-5p 1 1 0
chr11:3359232|3359483 hsa-miR-27a-5p 1 0 0
chr11:3359232|3359483 hsa-miR-8071 1 0 0
chr11:3359232|3359483 hsa-miR-7847-3p 1 0 0
chr11:3359232|3359483 hsa-miR-6793-5p 1 0 0
chr11:3359232|3359483 hsa-miR-6782-5p 1 0 0
chr11:3359232|3359483 hsa-miR-221-3p 1 0 0
chr11:3359232|3359483 hsa-miR-6815-3p 0 1 0
chr11:3359232|3359483 hsa-miR-1229-5p 1 1 0
chr11:3359232|3359483 hsa-miR-6834-5p 1 0 0
chr11:3359232|3359483 hsa-miR-4446-3p 1 0 0
chr11:3359232|3359483 hsa-miR-6500-3p 0 1 0
chr11:3359232|3359483 hsa-miR-3925-3p 0 1 0
chr11:3359232|3359483 hsa-miR-135b-3p 1 1 0
chr11:3359232|3359483 hsa-miR-4652-5p 0 1 0
chr11:3359232|3359483 hsa-miR-3158-3p 1 1 0
chr11:3359232|3359483 hsa-miR-6738-3p 0 1 0
chr11:3359232|3359483 hsa-miR-1296-3p 1 0 0
chr11:3359232|3359483 hsa-miR-4727-5p 0 1 0
chr11:3359232|3359483 hsa-miR-6839-3p 0 1 0
chr11:3359232|3359483 hsa-miR-3620-5p 1 0 0
chr11:3359232|3359483 hsa-miR-6794-5p 1 0 0
chr11:3359232|3359483 hsa-miR-3064-3p 0 1 0
chr11:3359232|3359483 hsa-miR-142-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:3359232|3359483
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MWFSDITKHKKTHTGEKPYKCDECGKNFTQSSN
Nucleotide Sequence ATGTGGTTCTCAGACATTACCAAACATAAGAAAACCCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGAAAAAACTTTACCCAGTCCTCAAAC

CircID chr11:3359232|3359483
ORF Type ORF2
Protein Length 75
Nucleotide Length 225
Protein Sequence MERSPTNVTNVEKTLPSPPTLLYIREFILERNPTSVKNVAESSCGSQTLPNIRKPILERNPTNVTNVEKTLPSPQ
Nucleotide Sequence CTGGAGAGAAGCCCTACAAATGTGACGAATGTGGAAAAAACTTTACCCAGTCCTCCAACCTTATTGTACATAAGAGAATTCATACTGGAGAGAAACCCTACAAGTGTGAAGAATGTGGCAGAGTCTTCATGTGGTTCTCAGACATTACCAAACATAAGAAAACCCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGAAAAAACTTTACCCAGTCCTCAA

CircID chr11:3359232|3359483
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MGKVFSTFVTFVGFLSSMGFLMFGNV
Nucleotide Sequence CTGGGTAAAGTTTTTTCCACATTCGTCACATTTGTAGGGTTTCTCTCCAGTATGGGTTTTCTTATGTTTGGTAATGTCTGA

CircID chr11:3359232|3359483
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MNSLMYNKVGGLGKVFSTFVTFVGLLSSMGFLMLSE
Nucleotide Sequence ATGAATTCTCTTATGTACAATAAGGTTGGAGGACTGGGTAAAGTTTTTTCCACATTCGTCACATTTGTAGGGCTTCTCTCCAGTATGGGTTTTCTTATGCTTAGTGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites