CircRNA Information

General Information
circRNA Basic Information
CircID chr11:33705372|33705644
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CAGGGCAACTTCAGGGATCCAGGTAGCAGGAAGGAATCGGTAGCCTCTTTGGTATGGCCACTATGGTGGTAGACACTGTCTACCTTGTTTGCTGAGTCTTCTGGCTTTCTTCCACTCTTCCTGCTCTTGGACATCAGACTCCAGGTTCTTCAGCCTTTGGAATCTAGGACTTGCACCAGTGGGTTGGTTGCCAGGGGCTCTTGGGCCTTTGGCCACAGACTGAAGGCTGGCTGCACTGTCAGCTTCCCCAGTTTTGAGGTTTTTGAACTCAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:33705372|33705644 hsa-miR-148a-5p 0 0 1
chr11:33705372|33705644 hsa-miR-148a-3p 0 0 1
chr11:33705372|33705644 hsa-miR-152-5p 0 0 1
chr11:33705372|33705644 hsa-miR-152-3p 0 0 1
chr11:33705372|33705644 hsa-miR-370-5p 0 0 1
chr11:33705372|33705644 hsa-miR-370-3p 0 0 1
chr11:33705372|33705644 hsa-miR-379-5p 0 0 1
chr11:33705372|33705644 hsa-miR-379-3p 0 0 1
chr11:33705372|33705644 hsa-miR-148b-5p 0 0 1
chr11:33705372|33705644 hsa-miR-148b-3p 0 0 1
chr11:33705372|33705644 hsa-miR-335-5p 0 0 1
chr11:33705372|33705644 hsa-miR-335-3p 0 0 1
chr11:33705372|33705644 hsa-miR-545-5p 0 0 1
chr11:33705372|33705644 hsa-miR-545-3p 0 0 1
chr11:33705372|33705644 hsa-miR-583 0 0 1
chr11:33705372|33705644 hsa-miR-619-5p 0 0 1
chr11:33705372|33705644 hsa-miR-619-3p 0 0 1
chr11:33705372|33705644 hsa-miR-622 0 0 1
chr11:33705372|33705644 hsa-miR-624-5p 0 0 1
chr11:33705372|33705644 hsa-miR-624-3p 0 0 1
chr11:33705372|33705644 hsa-miR-1323 0 1 1
chr11:33705372|33705644 hsa-miR-874-5p 0 0 1
chr11:33705372|33705644 hsa-miR-874-3p 0 0 1
chr11:33705372|33705644 hsa-miR-934 0 0 1
chr11:33705372|33705644 hsa-miR-663b 0 0 1
chr11:33705372|33705644 hsa-miR-548e-5p 0 0 1
chr11:33705372|33705644 hsa-miR-548e-3p 0 0 1
chr11:33705372|33705644 hsa-miR-548o-3p 0 0 1
chr11:33705372|33705644 hsa-miR-548o 0 0 1
chr11:33705372|33705644 hsa-miR-512-5p 0 0 1
chr11:33705372|33705644 hsa-miR-1225-3p 0 1 1
chr11:33705372|33705644 hsa-miR-146b-3p 0 0 1
chr11:33705372|33705644 hsa-miR-490-3p 0 1 1
chr11:33705372|33705644 hsa-miR-1289 0 0 1
chr11:33705372|33705644 hsa-miR-331-3p 0 1 1
chr11:33705372|33705644 hsa-miR-125a-5p 0 0 1
chr11:33705372|33705644 hsa-miR-548a-3p 0 0 1
chr11:33705372|33705644 hsa-miR-548b-3p 0 0 1
chr11:33705372|33705644 hsa-miR-548d-3p 0 0 1
chr11:33705372|33705644 hsa-miR-125b 0 0 1
chr11:33705372|33705644 hsa-miR-7 0 0 1
chr11:33705372|33705644 hsa-miR-548f 0 0 1
chr11:33705372|33705644 hsa-miR-2110 0 1 0
chr11:33705372|33705644 hsa-miR-548q 0 1 0
chr11:33705372|33705644 hsa-miR-3128 0 1 0
chr11:33705372|33705644 hsa-miR-3666 0 1 0
chr11:33705372|33705644 hsa-miR-4526 0 1 0
chr11:33705372|33705644 hsa-miR-3975 0 1 0
chr11:33705372|33705644 hsa-miR-4656 1 0 0
chr11:33705372|33705644 hsa-miR-4682 0 1 0
chr11:33705372|33705644 hsa-miR-6165 0 1 0
chr11:33705372|33705644 hsa-miR-6745 0 1 0
chr11:33705372|33705644 hsa-miR-8089 0 1 0
chr11:33705372|33705644 hsa-miR-6825-5p 1 0 0
chr11:33705372|33705644 hsa-miR-210-5p 0 1 0
chr11:33705372|33705644 hsa-miR-7851-3p 1 1 0
chr11:33705372|33705644 hsa-miR-3677-5p 0 1 0
chr11:33705372|33705644 hsa-miR-6875-3p 1 1 0
chr11:33705372|33705644 hsa-miR-3187-3p 1 0 0
chr11:33705372|33705644 hsa-miR-7108-5p 0 1 0
chr11:33705372|33705644 hsa-miR-3190-3p 1 1 0
chr11:33705372|33705644 hsa-miR-6760-5p 1 0 0
chr11:33705372|33705644 hsa-miR-3691-5p 1 0 0
chr11:33705372|33705644 hsa-miR-3667-3p 1 1 0
chr11:33705372|33705644 hsa-miR-3614-5p 1 0 0
chr11:33705372|33705644 hsa-miR-7156-3p 0 1 0
chr11:33705372|33705644 hsa-miR-6878-5p 1 1 0
chr11:33705372|33705644 hsa-miR-3922-5p 1 0 0
chr11:33705372|33705644 hsa-miR-7106-3p 1 0 0
chr11:33705372|33705644 hsa-miR-3944-5p 0 1 0
chr11:33705372|33705644 hsa-miR-3614-3p 0 1 0
chr11:33705372|33705644 hsa-miR-3074-5p 0 1 0
chr11:33705372|33705644 hsa-miR-4671-3p 0 1 0
chr11:33705372|33705644 hsa-miR-6768-3p 0 1 0
chr11:33705372|33705644 hsa-miR-6755-5p 0 1 0
chr11:33705372|33705644 hsa-miR-29c-5p 0 1 0
chr11:33705372|33705644 hsa-miR-221-5p 0 1 0
chr11:33705372|33705644 hsa-miR-1233-5p 1 0 0
chr11:33705372|33705644 hsa-miR-6778-5p 1 0 0
chr11:33705372|33705644 hsa-miR-6879-5p 1 1 0
chr11:33705372|33705644 hsa-miR-6780b-5p 0 1 0
chr11:33705372|33705644 hsa-miR-4725-3p 0 1 0
chr11:33705372|33705644 hsa-miR-4436b-3p 1 1 0
chr11:33705372|33705644 hsa-miR-4700-5p 0 1 0
chr11:33705372|33705644 hsa-miR-4747-5p 1 0 0
chr11:33705372|33705644 hsa-miR-4667-5p 0 1 0
chr11:33705372|33705644 hsa-miR-6893-3p 1 0 0
chr11:33705372|33705644 hsa-miR-3529-5p 0 1 0
chr11:33705372|33705644 hsa-miR-34c-5p 0 1 0
chr11:33705372|33705644 hsa-miR-7155-3p 0 1 0
chr11:33705372|33705644 hsa-miR-373-5p 0 1 0
chr11:33705372|33705644 hsa-miR-495-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:33705372|33705644
ORF Type ORF1
Protein Length 66
Nucleotide Length 198
Protein Sequence MSTLFAESSGFLPLFLLLDIRLQVLQPLESRTCTSGLVARGSWAFGHRLKAGCTVSFPSFEVFELR
Nucleotide Sequence CTGTCTACCTTGTTTGCTGAGTCTTCTGGCTTTCTTCCACTCTTCCTGCTCTTGGACATCAGACTCCAGGTTCTTCAGCCTTTGGAATCTAGGACTTGCACCAGTGGGTTGGTTGCCAGGGGCTCTTGGGCCTTTGGCCACAGACTGAAGGCTGGCTGCACTGTCAGCTTCCCCAGTTTTGAGGTTTTTGAACTCAGG
CircID chr11:33705372|33705644
ORF Type ORF2
Protein Length 44
Nucleotide Length 135
Protein Sequence MLSLLAFFHSSCSWTSDSRFFSLWNLGLAPVGWLPGALGPLATD
Nucleotide Sequence TTGCTGAGTCTTCTGGCTTTCTTCCACTCTTCCTGCTCTTGGACATCAGACTCCAGGTTCTTCAGCCTTTGGAATCTAGGACTTGCACCAGTGGGTTGGTTGCCAGGGGCTCTTGGGCCTTTGGCCACAGACTGA
CircID chr11:33705372|33705644
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MHQWVGCQGLLGLWPQTEGWLHCQLPQF
Nucleotide Sequence TTGCACCAGTGGGTTGGTTGCCAGGGGCTCTTGGGCCTTTGGCCACAGACTGAAGGCTGGCTGCACTGTCAGCTTCCCCAGTTTTGA
CircID chr11:33705372|33705644
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MKNLESDVQEQEEWKKARRLSKQGRQCLPP
Nucleotide Sequence CTGAAGAACCTGGAGTCTGATGTCCAAGAGCAGGAAGAGTGGAAGAAAGCCAGAAGACTCAGCAAACAAGGTAGACAGTGTCTACCACCATAG
CircID chr11:33705372|33705644
ORF Type ORF5
Protein Length 40
Nucleotide Length 123
Protein Sequence LSSKTSKLGKLTVQPAFSLWPKAQEPLATNPLVQVLDSKG
Nucleotide Sequence CTGAGTTCAAAAACCTCAAAACTGGGGAAGCTGACAGTGCAGCCAGCCTTCAGTCTGTGGCCAAAGGCCCAAGAGCCCCTGGCAACCAACCCACTGGTGCAAGTCCTAGATTCCAAAGGCTGA
CircID chr11:33705372|33705644
ORF Type ORF6
Protein Length 45
Nucleotide Length 135
Protein Sequence MMSKSRKSGRKPEDSANKVDSVYHHSGHTKEATDSFLLPGSLKLP
Nucleotide Sequence CTGATGTCCAAGAGCAGGAAGAGTGGAAGAAAGCCAGAAGACTCAGCAAACAAGGTAGACAGTGTCTACCACCATAGTGGCCATACCAAAGAGGCTACCGATTCCTTCCTGCTACCTGGATCCCTGAAGTTGCCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab