CircRNA Information

General Information
circRNA Basic Information
CircID chr11:33772450|33772599
Strand -
CircType exon
Host Gene ENSG00000110429.12;
Algorism CIRI2;
Sequence CCTCATCTCATCACTGTCTGTGAGTCACTCCCTACCTCCAGCAACGCCAGCCTTCTGTATCTTCCACCAGGCCATGCTGTTGAACAGTACCGTTCAGCAGTCCCGTCAATCTCTGAACATACTTTTCCCTCTGCCAGAACTGCATATGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:33772450|33772599 hsa-let-7b-5p 0 0 1
chr11:33772450|33772599 hsa-let-7b-3p 0 0 1
chr11:33772450|33772599 hsa-let-7c-5p 0 0 1
chr11:33772450|33772599 hsa-let-7c-3p 0 0 1
chr11:33772450|33772599 hsa-let-7d-5p 0 0 1
chr11:33772450|33772599 hsa-let-7d-3p 0 0 1
chr11:33772450|33772599 hsa-let-7e-5p 0 0 1
chr11:33772450|33772599 hsa-let-7e-3p 0 0 1
chr11:33772450|33772599 hsa-miR-98-5p 0 0 1
chr11:33772450|33772599 hsa-miR-98-3p 0 0 1
chr11:33772450|33772599 hsa-let-7g-5p 0 0 1
chr11:33772450|33772599 hsa-let-7g-3p 0 0 1
chr11:33772450|33772599 hsa-let-7i-5p 0 0 1
chr11:33772450|33772599 hsa-let-7i-3p 0 0 1
chr11:33772450|33772599 hsa-miR-143-5p 0 0 1
chr11:33772450|33772599 hsa-miR-143-3p 0 0 1
chr11:33772450|33772599 hsa-miR-452-5p 0 0 1
chr11:33772450|33772599 hsa-miR-452-3p 0 0 1
chr11:33772450|33772599 hsa-miR-567 0 0 1
chr11:33772450|33772599 hsa-miR-421 0 1 1
chr11:33772450|33772599 hsa-miR-887-5p 0 0 1
chr11:33772450|33772599 hsa-miR-887-3p 0 0 1
chr11:33772450|33772599 hsa-miR-1287-5p 0 0 1
chr11:33772450|33772599 hsa-miR-1287-3p 0 0 1
chr11:33772450|33772599 hsa-miR-548l 0 0 1
chr11:33772450|33772599 hsa-miR-548n 0 0 1
chr11:33772450|33772599 hsa-miR-1288-5p 0 0 1
chr11:33772450|33772599 hsa-miR-1288-3p 0 0 1
chr11:33772450|33772599 hsa-miR-1321 0 0 1
chr11:33772450|33772599 hsa-miR-1324 0 0 1
chr11:33772450|33772599 hsa-miR-7 0 0 1
chr11:33772450|33772599 hsa-let-7a 0 0 1
chr11:33772450|33772599 hsa-let-7f 0 0 1
chr11:33772450|33772599 hsa-miR-638 1 0 0
chr11:33772450|33772599 hsa-miR-661 1 0 0
chr11:33772450|33772599 hsa-miR-658 1 1 0
chr11:33772450|33772599 hsa-miR-762 1 0 0
chr11:33772450|33772599 hsa-miR-765 1 0 0
chr11:33772450|33772599 hsa-miR-298 1 0 0
chr11:33772450|33772599 hsa-miR-1270 1 0 0
chr11:33772450|33772599 hsa-miR-2861 1 0 0
chr11:33772450|33772599 hsa-miR-3132 1 0 0
chr11:33772450|33772599 hsa-miR-3141 1 0 0
chr11:33772450|33772599 hsa-miR-3153 1 0 0
chr11:33772450|33772599 hsa-miR-3154 1 0 0
chr11:33772450|33772599 hsa-miR-3185 1 0 0
chr11:33772450|33772599 hsa-miR-4257 1 0 0
chr11:33772450|33772599 hsa-miR-4271 1 0 0
chr11:33772450|33772599 hsa-miR-4277 0 1 0
chr11:33772450|33772599 hsa-miR-3652 1 0 0
chr11:33772450|33772599 hsa-miR-3665 1 0 0
chr11:33772450|33772599 hsa-miR-3929 1 0 0
chr11:33772450|33772599 hsa-miR-3937 1 0 0
chr11:33772450|33772599 hsa-miR-4429 1 0 0
chr11:33772450|33772599 hsa-miR-4430 1 0 0
chr11:33772450|33772599 hsa-miR-3135b 1 1 0
chr11:33772450|33772599 hsa-miR-4462 1 0 0
chr11:33772450|33772599 hsa-miR-4498 1 0 0
chr11:33772450|33772599 hsa-miR-4505 1 0 0
chr11:33772450|33772599 hsa-miR-4507 1 0 0
chr11:33772450|33772599 hsa-miR-4510 0 1 0
chr11:33772450|33772599 hsa-miR-1587 1 0 0
chr11:33772450|33772599 hsa-miR-4660 1 0 0
chr11:33772450|33772599 hsa-miR-4721 1 0 0
chr11:33772450|33772599 hsa-miR-4739 1 0 0
chr11:33772450|33772599 hsa-miR-4741 1 0 0
chr11:33772450|33772599 hsa-miR-4779 1 0 0
chr11:33772450|33772599 hsa-miR-5698 1 0 0
chr11:33772450|33772599 hsa-miR-5703 1 0 0
chr11:33772450|33772599 hsa-miR-5787 1 0 0
chr11:33772450|33772599 hsa-miR-6086 1 0 0
chr11:33772450|33772599 hsa-miR-6125 1 0 0
chr11:33772450|33772599 hsa-miR-6127 1 0 0
chr11:33772450|33772599 hsa-miR-6130 1 0 0
chr11:33772450|33772599 hsa-miR-6133 1 0 0
chr11:33772450|33772599 hsa-miR-6745 1 0 0
chr11:33772450|33772599 hsa-miR-7150 1 1 0
chr11:33772450|33772599 hsa-miR-8052 0 1 0
chr11:33772450|33772599 hsa-miR-8073 1 0 0
chr11:33772450|33772599 hsa-miR-138-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6734-5p 1 0 0
chr11:33772450|33772599 hsa-miR-4731-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6747-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6894-5p 1 0 0
chr11:33772450|33772599 hsa-miR-4687-3p 1 0 0
chr11:33772450|33772599 hsa-miR-6510-5p 1 0 0
chr11:33772450|33772599 hsa-miR-8071 1 0 0
chr11:33772450|33772599 hsa-miR-6833-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6089 1 0 0
chr11:33772450|33772599 hsa-miR-6873-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6880-5p 1 1 0
chr11:33772450|33772599 hsa-miR-7847-3p 1 0 0
chr11:33772450|33772599 hsa-miR-4695-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6746-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6721-5p 1 0 0
chr11:33772450|33772599 hsa-miR-197-5p 1 0 0
chr11:33772450|33772599 hsa-miR-3682-3p 1 0 0
chr11:33772450|33772599 hsa-miR-1292-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6732-5p 1 0 0
chr11:33772450|33772599 hsa-miR-3190-3p 1 1 0
chr11:33772450|33772599 hsa-miR-6805-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6798-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6760-5p 1 0 0
chr11:33772450|33772599 hsa-miR-2467-3p 1 1 0
chr11:33772450|33772599 hsa-miR-6782-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6835-5p 1 1 0
chr11:33772450|33772599 hsa-miR-30c-2-3p 1 0 0
chr11:33772450|33772599 hsa-miR-3691-5p 1 0 0
chr11:33772450|33772599 hsa-miR-885-3p 1 0 0
chr11:33772450|33772599 hsa-miR-485-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6847-5p 1 0 0
chr11:33772450|33772599 hsa-miR-7854-3p 1 0 0
chr11:33772450|33772599 hsa-miR-4787-5p 1 0 0
chr11:33772450|33772599 hsa-miR-4446-3p 1 0 0
chr11:33772450|33772599 hsa-miR-149-3p 1 0 0
chr11:33772450|33772599 hsa-miR-3162-5p 1 0 0
chr11:33772450|33772599 hsa-miR-4804-5p 0 1 0
chr11:33772450|33772599 hsa-miR-4750-5p 1 0 0
chr11:33772450|33772599 hsa-miR-214-3p 1 0 0
chr11:33772450|33772599 hsa-miR-10400-5p 1 0 0
chr11:33772450|33772599 hsa-miR-1207-5p 1 0 0
chr11:33772450|33772599 hsa-miR-1233-5p 1 0 0
chr11:33772450|33772599 hsa-miR-4763-3p 1 0 0
chr11:33772450|33772599 hsa-miR-6769b-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6778-5p 1 1 0
chr11:33772450|33772599 hsa-miR-6812-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6870-5p 1 0 0
chr11:33772450|33772599 hsa-miR-1343-5p 1 0 0
chr11:33772450|33772599 hsa-miR-5001-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6803-5p 1 0 0
chr11:33772450|33772599 hsa-miR-7107-5p 1 0 0
chr11:33772450|33772599 hsa-miR-1249-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6722-3p 1 0 0
chr11:33772450|33772599 hsa-miR-6751-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6763-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6797-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6808-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6879-5p 1 0 0
chr11:33772450|33772599 hsa-miR-7111-5p 1 0 0
chr11:33772450|33772599 hsa-miR-3620-5p 1 0 0
chr11:33772450|33772599 hsa-miR-1909-3p 1 0 0
chr11:33772450|33772599 hsa-miR-675-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6777-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6831-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6511a-5p 1 0 0
chr11:33772450|33772599 hsa-miR-30c-1-3p 1 0 0
chr11:33772450|33772599 hsa-miR-3679-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6750-5p 1 0 0
chr11:33772450|33772599 hsa-miR-3689d 1 0 0
chr11:33772450|33772599 hsa-miR-9851-5p 1 0 0
chr11:33772450|33772599 hsa-miR-320a-3p 1 0 0
chr11:33772450|33772599 hsa-miR-320b 1 0 0
chr11:33772450|33772599 hsa-miR-320c 1 0 0
chr11:33772450|33772599 hsa-miR-4756-5p 1 0 0
chr11:33772450|33772599 hsa-miR-6884-5p 1 0 0
chr11:33772450|33772599 hsa-miR-3619-5p 1 0 0
chr11:33772450|33772599 hsa-miR-320d 1 0 0
chr11:33772450|33772599 hsa-miR-2682-5p 1 0 0
chr11:33772450|33772599 hsa-miR-5195-3p 1 0 0
chr11:33772450|33772599 hsa-miR-5588-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:33772450|33772599
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MYLPPGHAVEQYRSAVPSISEHTFPSARTAYA
Nucleotide Sequence CTGTATCTTCCACCAGGCCATGCTGTTGAACAGTACCGTTCAGCAGTCCCGTCAATCTCTGAACATACTTTTCCCTCTGCCAGAACTGCATATGCC
CircID chr11:33772450|33772599
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MSVSHSLPPATPAFCIFHQAMLLNSTVQQSRQSLNILFPLPELHM
Nucleotide Sequence CTGTCTGTGAGTCACTCCCTACCTCCAGCAACGCCAGCCTTCTGTATCTTCCACCAGGCCATGCTGTTGAACAGTACCGTTCAGCAGTCCCGTCAATCTCTGAACATACTTTTCCCTCTGCCAGAACTGCATATG
CircID chr11:33772450|33772599
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MAEGKVCSEIDGTAERYCSTAWPGGRYRRLALLEVGSDSQTVMR
Nucleotide Sequence CTGGCAGAGGGAAAAGTATGTTCAGAGATTGACGGGACTGCTGAACGGTACTGTTCAACAGCATGGCCTGGTGGAAGATACAGAAGGCTGGCGTTGCTGGAGGTAGGGAGTGACTCACAGACAGTGATGAGATGA
CircID chr11:33772450|33772599
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MQFWQREKYVQRLTGLLNGTVQQHGLVEDTEGWRCWR
Nucleotide Sequence ATGCAGTTCTGGCAGAGGGAAAAGTATGTTCAGAGATTGACGGGACTGCTGAACGGTACTGTTCAACAGCATGGCCTGGTGGAAGATACAGAAGGCTGGCGTTGCTGGAGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab