CircRNA Information

General Information
circRNA Basic Information
CircID chr11:34658542|34658673
Strand +
CircType exon
Host Gene ENSG00000135373.11;
Algorism CIRI2;
Sequence CCCATAGCTGAGCCACTGCCTCTGATTTCAAGAACCTGAAGACGCCCTCAGATCGGTCTTCCCATTTTATTAATCCTGGGTTCTTGTCTGGGTTCAAGAGGATGTCGCGGATGAATTCCCATAAGTGAGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:34658542|34658673 hsa-miR-34a-5p 0 0 1
chr11:34658542|34658673 hsa-miR-34a-3p 0 0 1
chr11:34658542|34658673 hsa-miR-449a 0 0 1
chr11:34658542|34658673 hsa-miR-526b-5p 0 0 1
chr11:34658542|34658673 hsa-miR-526b-3p 0 0 1
chr11:34658542|34658673 hsa-miR-449b-5p 0 0 1
chr11:34658542|34658673 hsa-miR-449b-3p 0 0 1
chr11:34658542|34658673 hsa-miR-1827 0 0 1
chr11:34658542|34658673 hsa-miR-34c-5p 0 1 1
chr11:34658542|34658673 hsa-miR-548b-3p 0 0 1
chr11:34658542|34658673 hsa-miR-7 0 0 1
chr11:34658542|34658673 hsa-miR-24 0 0 1
chr11:34658542|34658673 hsa-miR-203 0 0 1
chr11:34658542|34658673 hsa-miR-637 1 1 0
chr11:34658542|34658673 hsa-miR-4506 1 0 0
chr11:34658542|34658673 hsa-miR-4635 0 1 0
chr11:34658542|34658673 hsa-miR-4673 0 1 0
chr11:34658542|34658673 hsa-miR-4739 1 0 0
chr11:34658542|34658673 hsa-miR-5693 0 1 0
chr11:34658542|34658673 hsa-miR-12119 0 1 0
chr11:34658542|34658673 hsa-miR-500b-3p 0 1 0
chr11:34658542|34658673 hsa-miR-6765-5p 1 0 0
chr11:34658542|34658673 hsa-miR-3150a-3p 1 0 0
chr11:34658542|34658673 hsa-miR-6804-5p 1 1 0
chr11:34658542|34658673 hsa-miR-4695-5p 1 0 0
chr11:34658542|34658673 hsa-miR-6798-5p 1 0 0
chr11:34658542|34658673 hsa-miR-2467-3p 1 0 0
chr11:34658542|34658673 hsa-miR-1226-5p 0 1 0
chr11:34658542|34658673 hsa-miR-204-3p 1 0 0
chr11:34658542|34658673 hsa-let-7b-5p 1 0 0
chr11:34658542|34658673 hsa-miR-6847-5p 1 0 0
chr11:34658542|34658673 hsa-miR-597-3p 1 0 0
chr11:34658542|34658673 hsa-miR-449c-5p 0 1 0
chr11:34658542|34658673 hsa-miR-34b-5p 0 1 0
chr11:34658542|34658673 hsa-miR-4646-5p 1 1 0
chr11:34658542|34658673 hsa-miR-6529-5p 1 0 0
chr11:34658542|34658673 hsa-miR-2682-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:34658542|34658673
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MKTPSDRSSHFINPGFLSGFKRMSRMNSHK
Nucleotide Sequence CTGAAGACGCCCTCAGATCGGTCTTCCCATTTTATTAATCCTGGGTTCTTGTCTGGGTTCAAGAGGATGTCGCGGATGAATTCCCATAAGTGA

CircID chr11:34658542|34658673
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MNPDKNPGLIKWEDRSEGVFRFLKSEAVAQLW
Nucleotide Sequence TTGAACCCAGACAAGAACCCAGGATTAATAAAATGGGAAGACCGATCTGAGGGCGTCTTCAGGTTCTTGAAATCAGAGGCAGTGGCTCAGCTATGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites