CircRNA Information

General Information
circRNA Basic Information
CircID chr11:34659055|34659323
Strand +
CircType exon
Host Gene ENSG00000135373.11;
Algorism CIRI2;
Sequence CTTTTTCTAAATCATGTCACATACAAAACATTTAATGCCCTCTGATTTTGTTTTTCTTTCTCTTAGCAAGAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAGAGGTGAAAAAAAATCACAACCACATACAGCATCATATTTCACAGAAAACTGTGTACGTTTTTTCCCCATATAGGACATACTTCGAAGTAACAAAATAATTTTTTTAATCGACCGTAGTGTTTCTTCTTCCCGTTAGAAGTAGTTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:34659055|34659323 hsa-miR-567 0 0 1
chr11:34659055|34659323 hsa-miR-606 0 0 1
chr11:34659055|34659323 hsa-miR-636 0 0 1
chr11:34659055|34659323 hsa-miR-802 0 0 1
chr11:34659055|34659323 hsa-miR-944 0 0 1
chr11:34659055|34659323 hsa-miR-297 0 0 1
chr11:34659055|34659323 hsa-miR-1257 0 0 1
chr11:34659055|34659323 hsa-miR-1272 0 0 1
chr11:34659055|34659323 hsa-miR-1322 0 0 1
chr11:34659055|34659323 hsa-miR-299-3p 0 0 1
chr11:34659055|34659323 hsa-miR-337-3p 0 0 1
chr11:34659055|34659323 hsa-miR-542-3p 0 0 1
chr11:34659055|34659323 hsa-miR-218 0 0 1
chr11:34659055|34659323 hsa-miR-453 0 0 1
chr11:34659055|34659323 hsa-miR-194 0 0 1
chr11:34659055|34659323 hsa-miR-3163 0 1 0
chr11:34659055|34659323 hsa-miR-3175 1 0 0
chr11:34659055|34659323 hsa-miR-3185 1 1 0
chr11:34659055|34659323 hsa-miR-3916 0 1 0
chr11:34659055|34659323 hsa-miR-4647 1 0 0
chr11:34659055|34659323 hsa-miR-4721 1 0 0
chr11:34659055|34659323 hsa-miR-4739 1 0 0
chr11:34659055|34659323 hsa-miR-5087 0 1 0
chr11:34659055|34659323 hsa-miR-8063 0 1 0
chr11:34659055|34659323 hsa-miR-7106-5p 1 0 0
chr11:34659055|34659323 hsa-miR-7114-5p 1 0 0
chr11:34659055|34659323 hsa-miR-6867-5p 1 0 0
chr11:34659055|34659323 hsa-miR-3616-3p 1 1 0
chr11:34659055|34659323 hsa-miR-2276-3p 0 1 0
chr11:34659055|34659323 hsa-miR-1250-5p 1 0 0
chr11:34659055|34659323 hsa-miR-4999-5p 1 1 0
chr11:34659055|34659323 hsa-miR-5196-5p 1 0 0
chr11:34659055|34659323 hsa-miR-4632-5p 1 0 0
chr11:34659055|34659323 hsa-miR-4646-5p 1 0 0
chr11:34659055|34659323 hsa-miR-4747-5p 1 0 0
chr11:34659055|34659323 hsa-miR-6785-5p 1 0 0
chr11:34659055|34659323 hsa-miR-6876-3p 1 0 0
chr11:34659055|34659323 hsa-miR-6733-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:34659055|34659323
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MSHTKHLMPSDFVFLSLSKKHKATNPVTLAVKKNSQ
Nucleotide Sequence ATGTCACATACAAAACATTTAATGCCCTCTGATTTTGTTTTTCTTTCTCTTAGCAAGAAGCACAAGGCTACAAATCCTGTTACTCTTGCAGTGAAAAAGAATTCACAATAG

CircID chr11:34659055|34659323
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MLLRSMSYMGKKRTQFSVKYDAVCGCDFFSPLL
Nucleotide Sequence TTGTTACTTCGAAGTATGTCCTATATGGGGAAAAAACGTACACAGTTTTCTGTGAAATATGATGCTGTATGTGGTTGTGATTTTTTTTCACCTCTATTGTGA

CircID chr11:34659055|34659323
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MMLYVVVIFFHLYCEFFFTARVTGFVALCFLLRERKTKSEGIKCFVCDMI
Nucleotide Sequence ATGATGCTGTATGTGGTTGTGATTTTTTTTCACCTCTATTGTGAATTCTTTTTCACTGCAAGAGTAACAGGATTTGTAGCCTTGTGCTTCTTGCTAAGAGAAAGAAAAACAAAATCAGAGGGCATTAAATGTTTTGTATGTGACATGATTTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites