CircRNA Information

General Information
circRNA Basic Information
CircID chr11:3824026|3824325
Strand -
CircType exon
Host Gene ENSG00000148985.18;
Algorism CIRI2;
Sequence CTCCCCGTGTTCCTGCTATCGCCCGCTCTGCCGCCTCAACTTCGGCCTCAATGTCGTGGAGAACCTCGCGTTGCTAGTGCTCACTTATGTCTCCTCCTCCGAGGACTTCAGTGGGTGCCTGGATGAGGGAGGAGTGGGGAAGTGTTCCCTGAGGGGACGGGCCTGCCCCTACCACATTCGGACCTTCCTACTTCGTGGTGTGGGCACTCCCTGCAATGTGGCTCCCAATCCTCTTTCCCTCCAGCCATCCACGAAAATGCTTTCATTGTGTTCATTGCCTCATCCCTCGGGCACATGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:3824026|3824325 hsa-miR-493-5p 0 0 1
chr11:3824026|3824325 hsa-miR-493-3p 0 0 1
chr11:3824026|3824325 hsa-miR-583 0 0 1
chr11:3824026|3824325 hsa-miR-602 0 0 1
chr11:3824026|3824325 hsa-miR-765 0 0 1
chr11:3824026|3824325 hsa-miR-873-5p 0 0 1
chr11:3824026|3824325 hsa-miR-873-3p 0 0 1
chr11:3824026|3824325 hsa-miR-920 0 0 1
chr11:3824026|3824325 hsa-miR-1304-5p 0 0 1
chr11:3824026|3824325 hsa-miR-1304-3p 0 0 1
chr11:3824026|3824325 hsa-miR-1247-5p 0 0 1
chr11:3824026|3824325 hsa-miR-1247-3p 0 0 1
chr11:3824026|3824325 hsa-miR-1255a 0 0 1
chr11:3824026|3824325 hsa-miR-1266-5p 0 0 1
chr11:3824026|3824325 hsa-miR-1266-3p 0 0 1
chr11:3824026|3824325 hsa-miR-1827 0 0 1
chr11:3824026|3824325 hsa-miR-486-3p 0 0 1
chr11:3824026|3824325 hsa-miR-455-5p 0 0 1
chr11:3824026|3824325 hsa-miR-483-3p 0 0 1
chr11:3824026|3824325 hsa-miR-515-5p 0 0 1
chr11:3824026|3824325 hsa-miR-1255b 0 0 1
chr11:3824026|3824325 hsa-miR-768-3p 0 0 1
chr11:3824026|3824325 hsa-miR-658 1 0 0
chr11:3824026|3824325 hsa-miR-762 1 0 0
chr11:3824026|3824325 hsa-miR-3132 1 0 0
chr11:3824026|3824325 hsa-miR-3141 1 0 0
chr11:3824026|3824325 hsa-miR-3175 1 0 0
chr11:3824026|3824325 hsa-miR-3196 1 0 0
chr11:3824026|3824325 hsa-miR-3197 1 0 0
chr11:3824026|3824325 hsa-miR-3652 1 0 0
chr11:3824026|3824325 hsa-miR-3911 1 0 0
chr11:3824026|3824325 hsa-miR-3937 1 0 0
chr11:3824026|3824325 hsa-miR-4430 1 0 0
chr11:3824026|3824325 hsa-miR-3135b 1 0 0
chr11:3824026|3824325 hsa-miR-4466 1 0 0
chr11:3824026|3824325 hsa-miR-4467 1 0 0
chr11:3824026|3824325 hsa-miR-4481 1 0 0
chr11:3824026|3824325 hsa-miR-4487 1 0 0
chr11:3824026|3824325 hsa-miR-4488 1 0 0
chr11:3824026|3824325 hsa-miR-4505 1 0 0
chr11:3824026|3824325 hsa-miR-3960 1 0 0
chr11:3824026|3824325 hsa-miR-4656 1 0 0
chr11:3824026|3824325 hsa-miR-4669 1 0 0
chr11:3824026|3824325 hsa-miR-4689 1 0 0
chr11:3824026|3824325 hsa-miR-4739 1 0 0
chr11:3824026|3824325 hsa-miR-4767 1 0 0
chr11:3824026|3824325 hsa-miR-5093 1 0 0
chr11:3824026|3824325 hsa-miR-5194 1 0 0
chr11:3824026|3824325 hsa-miR-5787 1 0 0
chr11:3824026|3824325 hsa-miR-6086 1 0 0
chr11:3824026|3824325 hsa-miR-6127 1 0 0
chr11:3824026|3824325 hsa-miR-6132 1 0 0
chr11:3824026|3824325 hsa-miR-6133 1 0 0
chr11:3824026|3824325 hsa-miR-6134 1 0 0
chr11:3824026|3824325 hsa-miR-8053 1 0 0
chr11:3824026|3824325 hsa-miR-8072 1 0 0
chr11:3824026|3824325 hsa-miR-8085 1 0 0
chr11:3824026|3824325 hsa-miR-6734-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4731-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6765-5p 1 0 0
chr11:3824026|3824325 hsa-miR-25-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6833-5p 1 0 0
chr11:3824026|3824325 hsa-miR-5187-5p 1 0 0
chr11:3824026|3824325 hsa-miR-1227-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6089 1 0 0
chr11:3824026|3824325 hsa-miR-6757-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6880-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4695-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4722-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6820-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4474-3p 1 0 0
chr11:3824026|3824325 hsa-miR-6721-5p 1 0 0
chr11:3824026|3824325 hsa-miR-197-5p 1 0 0
chr11:3824026|3824325 hsa-miR-8069 1 0 0
chr11:3824026|3824325 hsa-miR-7108-5p 1 0 0
chr11:3824026|3824325 hsa-miR-3180-3p 1 0 0
chr11:3824026|3824325 hsa-miR-6748-5p 1 0 0
chr11:3824026|3824325 hsa-miR-3190-3p 1 0 0
chr11:3824026|3824325 hsa-miR-6782-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6821-5p 1 0 0
chr11:3824026|3824325 hsa-miR-5008-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6735-3p 1 0 0
chr11:3824026|3824325 hsa-miR-3691-5p 1 0 0
chr11:3824026|3824325 hsa-miR-885-3p 1 0 0
chr11:3824026|3824325 hsa-miR-1228-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4732-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4743-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4787-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4446-3p 1 0 0
chr11:3824026|3824325 hsa-miR-149-3p 1 0 0
chr11:3824026|3824325 hsa-miR-6717-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6789-5p 1 0 0
chr11:3824026|3824325 hsa-miR-550b-2-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6877-5p 1 0 0
chr11:3824026|3824325 hsa-miR-10400-5p 1 0 0
chr11:3824026|3824325 hsa-miR-1207-5p 1 0 0
chr11:3824026|3824325 hsa-miR-1233-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4763-3p 1 0 0
chr11:3824026|3824325 hsa-miR-6769b-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6778-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6787-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6812-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6816-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6865-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6775-5p 1 0 0
chr11:3824026|3824325 hsa-miR-1343-5p 1 0 0
chr11:3824026|3824325 hsa-miR-5001-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6756-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6815-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6851-5p 1 0 0
chr11:3824026|3824325 hsa-miR-1249-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6779-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6780a-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6797-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6808-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6879-5p 1 0 0
chr11:3824026|3824325 hsa-miR-5196-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6836-5p 1 0 0
chr11:3824026|3824325 hsa-miR-1237-5p 1 0 0
chr11:3824026|3824325 hsa-miR-328-5p 1 0 0
chr11:3824026|3824325 hsa-miR-449c-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4649-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4745-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6729-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6795-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6846-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6848-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6858-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6887-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4723-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6831-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4758-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6511a-5p 1 0 0
chr11:3824026|3824325 hsa-miR-3198 1 0 0
chr11:3824026|3824325 hsa-miR-6731-5p 1 0 0
chr11:3824026|3824325 hsa-miR-4664-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6785-5p 1 0 0
chr11:3824026|3824325 hsa-miR-6724-5p 1 0 0
chr11:3824026|3824325 hsa-miR-550a-3-5p 1 0 0
chr11:3824026|3824325 hsa-miR-550a-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:3824026|3824325
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MLSPALPPQLRPQCRGEPRVASAHLCLLLRGLQWVPG
Nucleotide Sequence CTGCTATCGCCCGCTCTGCCGCCTCAACTTCGGCCTCAATGTCGTGGAGAACCTCGCGTTGCTAGTGCTCACTTATGTCTCCTCCTCCGAGGACTTCAGTGGGTGCCTGGATGA
CircID chr11:3824026|3824325
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MPLPHSDLPTSWCGHSLQCGSQSSFPPAIHENAFIVFIASSLGHML
Nucleotide Sequence CTGCCCCTACCACATTCGGACCTTCCTACTTCGTGGTGTGGGCACTCCCTGCAATGTGGCTCCCAATCCTCTTTCCCTCCAGCCATCCACGAAAATGCTTTCATTGTGTTCATTGCCTCATCCCTCGGGCACATGCTC
CircID chr11:3824026|3824325
ORF Type ORF3
Protein Length 76
Nucleotide Length 228
Protein Sequence MLVLTYVSSSEDFSGCLDEGGVGKCSLRGRACPYHIRTFLLRGVGTPCNVAPNPLSLQPSTKMLSLCSLPHPSGTC
Nucleotide Sequence TTGCTAGTGCTCACTTATGTCTCCTCCTCCGAGGACTTCAGTGGGTGCCTGGATGAGGGAGGAGTGGGGAAGTGTTCCCTGAGGGGACGGGCCTGCCCCTACCACATTCGGACCTTCCTACTTCGTGGTGTGGGCACTCCCTGCAATGTGGCTCCCAATCCTCTTTCCCTCCAGCCATCCACGAAAATGCTTTCATTGTGTTCATTGCCTCATCCCTCGGGCACATGC
CircID chr11:3824026|3824325
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MWLPILFPSSHPRKCFHCVHCLIPRAHA
Nucleotide Sequence ATGTGGCTCCCAATCCTCTTTCCCTCCAGCCATCCACGAAAATGCTTTCATTGTGTTCATTGCCTCATCCCTCGGGCACATGCT
CircID chr11:3824026|3824325
ORF Type ORF5
Protein Length 62
Nucleotide Length 189
Protein Sequence MCPRDEAMNTMKAFSWMAGGKEDWEPHCRECPHHEVGRSECGRGRPVPSGNTSPLLPHPGTH
Nucleotide Sequence ATGTGCCCGAGGGATGAGGCAATGAACACAATGAAAGCATTTTCGTGGATGGCTGGAGGGAAAGAGGATTGGGAGCCACATTGCAGGGAGTGCCCACACCACGAAGTAGGAAGGTCCGAATGTGGTAGGGGCAGGCCCGTCCCCTCAGGGAACACTTCCCCACTCCTCCCTCATCCAGGCACCCACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab