CircRNA Information

General Information
circRNA Basic Information
CircID chr11:44933783|44933997
Strand -
CircType exon
Host Gene ENSG00000175274.17;
Algorism CIRI2;
Sequence CTGATCCCACTCAGCCAGACCCTGGAGGCAGCCCGGGCTGCACGTGTGGGGGGCAGCTCACCGGGAAGCAGGCAGGAGTGGGGGACAGGCTGAGCCCAGTGGCCATCAGGCCTTGGGGTACATGCCAAGGGGCAAGAGAGCGCTATGGCTTTCCTTCTGTTCCTCCTCTCCCAGCCCCACCACTTACAATGGTCTCCATTGGGGGCTGTGTGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:44933783|44933997 hsa-miR-22-5p 0 0 1
chr11:44933783|44933997 hsa-miR-22-3p 0 0 1
chr11:44933783|44933997 hsa-miR-149-5p 0 0 1
chr11:44933783|44933997 hsa-miR-149-3p 0 0 1
chr11:44933783|44933997 hsa-miR-558 0 0 1
chr11:44933783|44933997 hsa-miR-588 0 1 1
chr11:44933783|44933997 hsa-miR-638 0 0 1
chr11:44933783|44933997 hsa-miR-541-5p 0 0 1
chr11:44933783|44933997 hsa-miR-541-3p 0 0 1
chr11:44933783|44933997 hsa-miR-1182 0 1 1
chr11:44933783|44933997 hsa-miR-1252-5p 0 0 1
chr11:44933783|44933997 hsa-miR-1252-3p 0 0 1
chr11:44933783|44933997 hsa-miR-654-5p 0 0 1
chr11:44933783|44933997 hsa-miR-361-3p 0 0 1
chr11:44933783|44933997 hsa-miR-324-3p 0 0 1
chr11:44933783|44933997 hsa-miR-769-3p 0 0 1
chr11:44933783|44933997 hsa-miR-483-3p 0 1 1
chr11:44933783|44933997 hsa-miR-450b-3p 0 0 1
chr11:44933783|44933997 hsa-miR-516a-3p 0 0 1
chr11:44933783|44933997 hsa-miR-24 0 0 1
chr11:44933783|44933997 hsa-miR-1201 0 0 1
chr11:44933783|44933997 hsa-miR-632 0 1 0
chr11:44933783|44933997 hsa-miR-762 1 1 0
chr11:44933783|44933997 hsa-miR-1538 0 1 0
chr11:44933783|44933997 hsa-miR-1913 1 1 0
chr11:44933783|44933997 hsa-miR-1976 0 1 0
chr11:44933783|44933997 hsa-miR-4252 0 1 0
chr11:44933783|44933997 hsa-miR-4286 0 1 0
chr11:44933783|44933997 hsa-miR-4498 0 1 0
chr11:44933783|44933997 hsa-miR-4505 0 1 0
chr11:44933783|44933997 hsa-miR-4508 1 0 0
chr11:44933783|44933997 hsa-miR-1587 1 0 0
chr11:44933783|44933997 hsa-miR-4656 1 0 0
chr11:44933783|44933997 hsa-miR-4739 1 1 0
chr11:44933783|44933997 hsa-miR-5787 0 1 0
chr11:44933783|44933997 hsa-miR-6085 1 1 0
chr11:44933783|44933997 hsa-miR-8077 0 1 0
chr11:44933783|44933997 hsa-miR-8085 0 1 0
chr11:44933783|44933997 hsa-miR-8089 1 0 0
chr11:44933783|44933997 hsa-miR-4747-3p 1 0 0
chr11:44933783|44933997 hsa-miR-214-5p 0 1 0
chr11:44933783|44933997 hsa-miR-6747-3p 0 1 0
chr11:44933783|44933997 hsa-miR-3192-5p 0 1 0
chr11:44933783|44933997 hsa-miR-3064-5p 0 1 0
chr11:44933783|44933997 hsa-miR-6762-3p 1 0 0
chr11:44933783|44933997 hsa-miR-3187-3p 0 1 0
chr11:44933783|44933997 hsa-miR-6849-3p 0 1 0
chr11:44933783|44933997 hsa-miR-7845-5p 0 1 0
chr11:44933783|44933997 hsa-miR-1915-5p 1 0 0
chr11:44933783|44933997 hsa-miR-3151-5p 1 1 0
chr11:44933783|44933997 hsa-miR-6796-5p 0 1 0
chr11:44933783|44933997 hsa-miR-6882-3p 0 1 0
chr11:44933783|44933997 hsa-miR-4436b-5p 0 1 0
chr11:44933783|44933997 hsa-miR-6786-5p 1 0 0
chr11:44933783|44933997 hsa-miR-6514-3p 0 1 0
chr11:44933783|44933997 hsa-miR-296-3p 1 0 0
chr11:44933783|44933997 hsa-miR-3922-5p 0 1 0
chr11:44933783|44933997 hsa-miR-6738-3p 1 0 0
chr11:44933783|44933997 hsa-miR-6748-3p 0 1 0
chr11:44933783|44933997 hsa-miR-6769b-5p 1 0 0
chr11:44933783|44933997 hsa-miR-5001-5p 0 1 0
chr11:44933783|44933997 hsa-miR-6756-5p 1 1 0
chr11:44933783|44933997 hsa-miR-6769a-5p 1 0 0
chr11:44933783|44933997 hsa-miR-6803-5p 1 0 0
chr11:44933783|44933997 hsa-miR-6813-5p 1 0 0
chr11:44933783|44933997 hsa-miR-6780a-5p 0 1 0
chr11:44933783|44933997 hsa-miR-6788-5p 0 1 0
chr11:44933783|44933997 hsa-miR-7111-5p 1 1 0
chr11:44933783|44933997 hsa-miR-3620-5p 1 0 0
chr11:44933783|44933997 hsa-miR-4728-5p 1 1 0
chr11:44933783|44933997 hsa-miR-10396b-5p 1 0 0
chr11:44933783|44933997 hsa-miR-6846-5p 1 0 0
chr11:44933783|44933997 hsa-miR-6848-5p 1 0 0
chr11:44933783|44933997 hsa-miR-6887-5p 0 1 0
chr11:44933783|44933997 hsa-miR-1238-5p 0 1 0
chr11:44933783|44933997 hsa-miR-4758-5p 0 1 0
chr11:44933783|44933997 hsa-miR-3198 1 0 0
chr11:44933783|44933997 hsa-miR-30c-1-3p 0 1 0
chr11:44933783|44933997 hsa-miR-6731-5p 0 1 0
chr11:44933783|44933997 hsa-miR-4646-5p 1 0 0
chr11:44933783|44933997 hsa-miR-1234-3p 0 1 0
chr11:44933783|44933997 hsa-miR-6764-5p 0 1 0
chr11:44933783|44933997 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:44933783|44933997
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence LIPLSQTLEAARAARVGGSSPGSRQEWGTG
Nucleotide Sequence CTGATCCCACTCAGCCAGACCCTGGAGGCAGCCCGGGCTGCACGTGTGGGGGGCAGCTCACCGGGAAGCAGGCAGGAGTGGGGGACAGGCTGA
CircID chr11:44933783|44933997
ORF Type ORF2
Protein Length 59
Nucleotide Length 177
Protein Sequence MHVWGAAHREAGRSGGQAEPSGHQALGYMPRGKRALWLSFCSSSPSPTTYNGLHWGLCV
Nucleotide Sequence CTGCACGTGTGGGGGGCAGCTCACCGGGAAGCAGGCAGGAGTGGGGGACAGGCTGAGCCCAGTGGCCATCAGGCCTTGGGGTACATGCCAAGGGGCAAGAGAGCGCTATGGCTTTCCTTCTGTTCCTCCTCTCCCAGCCCCACCACTTACAATGGTCTCCATTGGGGGCTGTGTGTC
CircID chr11:44933783|44933997
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MSPVAIRPWGTCQGARERYGFPSVPPLPAPPLTMVSIGGCVS
Nucleotide Sequence CTGAGCCCAGTGGCCATCAGGCCTTGGGGTACATGCCAAGGGGCAAGAGAGCGCTATGGCTTTCCTTCTGTTCCTCCTCTCCCAGCCCCACCACTTACAATGGTCTCCATTGGGGGCTGTGTGTCC
CircID chr11:44933783|44933997
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MACTPRPDGHWAQPVPHSCLLPGELPPTRAARAASRVWLSGI
Nucleotide Sequence TTGGCATGTACCCCAAGGCCTGATGGCCACTGGGCTCAGCCTGTCCCCCACTCCTGCCTGCTTCCCGGTGAGCTGCCCCCCACACGTGCAGCCCGGGCTGCCTCCAGGGTCTGGCTGAGTGGGATC
CircID chr11:44933783|44933997
ORF Type ORF5
Protein Length 32
Nucleotide Length 99
Protein Sequence MMATGLSLSPTPACFPVSCPPHVQPGLPPGSG
Nucleotide Sequence CTGATGGCCACTGGGCTCAGCCTGTCCCCCACTCCTGCCTGCTTCCCGGTGAGCTGCCCCCCACACGTGCAGCCCGGGCTGCCTCCAGGGTCTGGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab