CircRNA Information

General Information
circRNA Basic Information
CircID chr11:45804456|45804672
Strand -
CircType exon
Host Gene ENSG00000181830.8;
Algorism CIRI2;
Sequence AGGCAGGGACGCGGGAGCTGATGCGGCTGGACCGGCCGGGGAAACAGTATTTTCTGGAAGGGGTAAGAGATGCTGTCTTGAGCCTTTGGAATCTCGGATCCGGGCCGCCCAGAGGACCTCGACAGGAGCACAGGGAGGACAAACTGAAGTCCGAGAGAGGCGGCGTGGCCTCCGGCCTCGGGGAGCGCTGCCGGGGGTCTCGGGCTTGGGAGAGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:45804456|45804672 hsa-miR-200b-5p 0 0 1
chr11:45804456|45804672 hsa-miR-200b-3p 0 0 1
chr11:45804456|45804672 hsa-miR-150-5p 0 0 1
chr11:45804456|45804672 hsa-miR-150-3p 0 0 1
chr11:45804456|45804672 hsa-miR-200c-5p 0 0 1
chr11:45804456|45804672 hsa-miR-200c-3p 0 0 1
chr11:45804456|45804672 hsa-miR-326 0 0 1
chr11:45804456|45804672 hsa-miR-429 0 0 1
chr11:45804456|45804672 hsa-miR-452-5p 0 0 1
chr11:45804456|45804672 hsa-miR-452-3p 0 0 1
chr11:45804456|45804672 hsa-miR-612 0 0 1
chr11:45804456|45804672 hsa-miR-127-3p 0 0 1
chr11:45804456|45804672 hsa-miR-532-3p 0 0 1
chr11:45804456|45804672 hsa-miR-885-3p 0 0 1
chr11:45804456|45804672 hsa-miR-339-5p 0 0 1
chr11:45804456|45804672 hsa-miR-525-5p 0 0 1
chr11:45804456|45804672 hsa-miR-520a-5p 0 0 1
chr11:45804456|45804672 hsa-miR-330-5p 0 1 1
chr11:45804456|45804672 hsa-miR-1274a 0 0 1
chr11:45804456|45804672 hsa-miR-1274b 0 0 1
chr11:45804456|45804672 hsa-miR-1285 0 0 1
chr11:45804456|45804672 hsa-miR-3183 0 1 0
chr11:45804456|45804672 hsa-miR-3615 1 0 0
chr11:45804456|45804672 hsa-miR-3714 0 1 0
chr11:45804456|45804672 hsa-miR-3907 1 0 0
chr11:45804456|45804672 hsa-miR-3909 1 1 0
chr11:45804456|45804672 hsa-miR-4479 1 0 0
chr11:45804456|45804672 hsa-miR-4682 1 0 0
chr11:45804456|45804672 hsa-miR-4741 1 0 0
chr11:45804456|45804672 hsa-miR-6749-3p 1 0 0
chr11:45804456|45804672 hsa-miR-4665-3p 1 1 0
chr11:45804456|45804672 hsa-miR-6720-5p 0 1 0
chr11:45804456|45804672 hsa-miR-6892-3p 1 1 0
chr11:45804456|45804672 hsa-miR-6089 0 1 0
chr11:45804456|45804672 hsa-miR-3189-5p 1 0 0
chr11:45804456|45804672 hsa-miR-7110-3p 0 1 0
chr11:45804456|45804672 hsa-miR-6882-3p 1 0 0
chr11:45804456|45804672 hsa-miR-4713-5p 0 1 0
chr11:45804456|45804672 hsa-miR-615-3p 0 1 0
chr11:45804456|45804672 hsa-miR-615-5p 1 0 0
chr11:45804456|45804672 hsa-miR-6772-3p 1 1 0
chr11:45804456|45804672 hsa-miR-6763-3p 1 1 0
chr11:45804456|45804672 hsa-miR-3944-3p 1 0 0
chr11:45804456|45804672 hsa-miR-1908-3p 1 0 0
chr11:45804456|45804672 hsa-miR-7113-3p 0 1 0
chr11:45804456|45804672 hsa-miR-4743-5p 0 1 0
chr11:45804456|45804672 hsa-miR-6781-5p 0 1 0
chr11:45804456|45804672 hsa-miR-4707-5p 1 1 0
chr11:45804456|45804672 hsa-miR-3180-5p 0 1 0
chr11:45804456|45804672 hsa-miR-2355-3p 0 1 0
chr11:45804456|45804672 hsa-miR-3940-3p 0 1 0
chr11:45804456|45804672 hsa-miR-4632-3p 1 0 0
chr11:45804456|45804672 hsa-miR-1914-5p 1 1 0
chr11:45804456|45804672 hsa-miR-5088-3p 1 0 0
chr11:45804456|45804672 hsa-miR-6859-3p 0 1 0
chr11:45804456|45804672 hsa-miR-2681-5p 0 1 0
chr11:45804456|45804672 hsa-miR-4717-5p 0 1 0
chr11:45804456|45804672 hsa-miR-4645-3p 0 1 0
chr11:45804456|45804672 hsa-miR-6850-3p 1 1 0
chr11:45804456|45804672 hsa-miR-3127-3p 1 1 0
chr11:45804456|45804672 hsa-miR-4685-3p 1 0 0
chr11:45804456|45804672 hsa-miR-892c-3p 0 1 0
chr11:45804456|45804672 hsa-miR-4745-3p 0 1 0
chr11:45804456|45804672 hsa-miR-5008-3p 1 1 0
chr11:45804456|45804672 hsa-miR-6791-3p 1 0 0
chr11:45804456|45804672 hsa-miR-6756-3p 1 0 0
chr11:45804456|45804672 hsa-miR-3059-5p 1 0 0
chr11:45804456|45804672 hsa-miR-4723-3p 1 1 0
chr11:45804456|45804672 hsa-miR-5006-3p 1 0 0
chr11:45804456|45804672 hsa-miR-4676-3p 0 1 0
chr11:45804456|45804672 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:45804456|45804672
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MESRIRAAQRTSTGAQGGQTEVRERRRGLRPRGALPGVSGLGEG
Nucleotide Sequence TTGGAATCTCGGATCCGGGCCGCCCAGAGGACCTCGACAGGAGCACAGGGAGGACAAACTGAAGTCCGAGAGAGGCGGCGTGGCCTCCGGCCTCGGGGAGCGCTGCCGGGGGTCTCGGGCTTGGGAGAGGGC

CircID chr11:45804456|45804672
ORF Type ORF2
Protein Length 66
Nucleotide Length 198
Protein Sequence MMRLDRPGKQYFLEGVRDAVLSLWNLGSGPPRGPRQEHREDKLKSERGGVASGLGERCRGSRAWER
Nucleotide Sequence CTGATGCGGCTGGACCGGCCGGGGAAACAGTATTTTCTGGAAGGGGTAAGAGATGCTGTCTTGAGCCTTTGGAATCTCGGATCCGGGCCGCCCAGAGGACCTCGACAGGAGCACAGGGAGGACAAACTGAAGTCCGAGAGAGGCGGCGTGGCCTCCGGCCTCGGGGAGCGCTGCCGGGGGTCTCGGGCTTGGGAGAGG

CircID chr11:45804456|45804672
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MSSLCSCRGPLGGPDPRFQRLKTASLTPSRKYCFPGRSSRISSRVPA
Nucleotide Sequence TTGTCCTCCCTGTGCTCCTGTCGAGGTCCTCTGGGCGGCCCGGATCCGAGATTCCAAAGGCTCAAGACAGCATCTCTTACCCCTTCCAGAAAATACTGTTTCCCCGGCCGGTCCAGCCGCATCAGCTCCCGCGTCCCTGCC

CircID chr11:45804456|45804672
ORF Type ORF4
Protein Length 41
Nucleotide Length 123
Protein Sequence MSRSSGRPGSEIPKAQDSISYPFQKILFPRPVQPHQLPRPC
Nucleotide Sequence CTGTCGAGGTCCTCTGGGCGGCCCGGATCCGAGATTCCAAAGGCTCAAGACAGCATCTCTTACCCCTTCCAGAAAATACTGTTTCCCCGGCCGGTCCAGCCGCATCAGCTCCCGCGTCCCTGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites