CircRNA Information

General Information
circRNA Basic Information
CircID chr11:45811745|45811941
Strand +
CircType exon
Host Gene ENSG00000181830.8;
Algorism CIRI2;
Sequence CCCATTCCCAGGCCACTGCCCAGCAGCCCCTGGGGATCTGCTGGTGTCAGAGGGAACTCGCTCATTTCCTCCCTCAGTCCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTGCCTGCCCACCGCAGACGGAAGGCTTCCCAACCCTCTCCAGGTGGCTGTGGTAGGGCCATCTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:45811745|45811941 hsa-miR-34a-5p 0 0 1
chr11:45811745|45811941 hsa-miR-34a-3p 0 0 1
chr11:45811745|45811941 hsa-miR-185-5p 0 0 1
chr11:45811745|45811941 hsa-miR-185-3p 0 0 1
chr11:45811745|45811941 hsa-miR-328-5p 0 0 1
chr11:45811745|45811941 hsa-miR-328-3p 0 0 1
chr11:45811745|45811941 hsa-miR-422a 0 1 1
chr11:45811745|45811941 hsa-miR-449a 0 0 1
chr11:45811745|45811941 hsa-miR-595 0 1 1
chr11:45811745|45811941 hsa-miR-612 0 1 1
chr11:45811745|45811941 hsa-miR-619-5p 0 0 1
chr11:45811745|45811941 hsa-miR-619-3p 0 0 1
chr11:45811745|45811941 hsa-miR-634 0 0 1
chr11:45811745|45811941 hsa-miR-661 0 1 1
chr11:45811745|45811941 hsa-miR-449b-5p 0 0 1
chr11:45811745|45811941 hsa-miR-449b-3p 0 0 1
chr11:45811745|45811941 hsa-miR-765 0 0 1
chr11:45811745|45811941 hsa-miR-541-5p 0 0 1
chr11:45811745|45811941 hsa-miR-541-3p 0 0 1
chr11:45811745|45811941 hsa-miR-922 0 0 1
chr11:45811745|45811941 hsa-miR-1226-5p 0 0 1
chr11:45811745|45811941 hsa-miR-1226-3p 0 0 1
chr11:45811745|45811941 hsa-miR-663b 1 0 1
chr11:45811745|45811941 hsa-miR-1291 0 0 1
chr11:45811745|45811941 hsa-miR-1288-5p 0 0 1
chr11:45811745|45811941 hsa-miR-1288-3p 0 0 1
chr11:45811745|45811941 hsa-miR-1321 0 1 1
chr11:45811745|45811941 hsa-miR-671-5p 0 0 1
chr11:45811745|45811941 hsa-miR-296-5p 0 0 1
chr11:45811745|45811941 hsa-miR-296-3p 1 1 1
chr11:45811745|45811941 hsa-miR-654-5p 0 0 1
chr11:45811745|45811941 hsa-miR-140-3p 0 0 1
chr11:45811745|45811941 hsa-miR-34c-5p 0 0 1
chr11:45811745|45811941 hsa-miR-642 0 0 1
chr11:45811745|45811941 hsa-miR-378 0 0 1
chr11:45811745|45811941 hsa-miR-644 0 0 1
chr11:45811745|45811941 hsa-miR-1269 0 0 1
chr11:45811745|45811941 hsa-miR-1285 0 0 1
chr11:45811745|45811941 hsa-miR-1254 0 0 1
chr11:45811745|45811941 hsa-miR-768-5p 0 0 1
chr11:45811745|45811941 hsa-miR-762 1 0 0
chr11:45811745|45811941 hsa-miR-1269a 0 1 0
chr11:45811745|45811941 hsa-miR-378b 0 1 0
chr11:45811745|45811941 hsa-miR-3147 1 1 0
chr11:45811745|45811941 hsa-miR-4297 0 1 0
chr11:45811745|45811941 hsa-miR-378c 0 1 0
chr11:45811745|45811941 hsa-miR-4292 0 1 0
chr11:45811745|45811941 hsa-miR-3911 1 0 0
chr11:45811745|45811941 hsa-miR-4507 1 0 0
chr11:45811745|45811941 hsa-miR-4510 0 1 0
chr11:45811745|45811941 hsa-miR-1269b 0 1 0
chr11:45811745|45811941 hsa-miR-1587 1 0 0
chr11:45811745|45811941 hsa-miR-4651 1 0 0
chr11:45811745|45811941 hsa-miR-4656 1 1 0
chr11:45811745|45811941 hsa-miR-4739 1 1 0
chr11:45811745|45811941 hsa-miR-5093 0 1 0
chr11:45811745|45811941 hsa-miR-5693 0 1 0
chr11:45811745|45811941 hsa-miR-5708 0 1 0
chr11:45811745|45811941 hsa-miR-6085 0 1 0
chr11:45811745|45811941 hsa-miR-6086 1 0 0
chr11:45811745|45811941 hsa-miR-6090 1 0 0
chr11:45811745|45811941 hsa-miR-6127 0 1 0
chr11:45811745|45811941 hsa-miR-6133 1 1 0
chr11:45811745|45811941 hsa-miR-6860 1 1 0
chr11:45811745|45811941 hsa-miR-8089 1 0 0
chr11:45811745|45811941 hsa-miR-9900 0 1 0
chr11:45811745|45811941 hsa-miR-7106-5p 0 1 0
chr11:45811745|45811941 hsa-miR-6822-3p 1 0 0
chr11:45811745|45811941 hsa-miR-3692-5p 0 1 0
chr11:45811745|45811941 hsa-miR-766-5p 0 1 0
chr11:45811745|45811941 hsa-miR-6757-5p 1 0 0
chr11:45811745|45811941 hsa-miR-6762-3p 0 1 0
chr11:45811745|45811941 hsa-miR-6721-5p 0 1 0
chr11:45811745|45811941 hsa-miR-8069 1 0 0
chr11:45811745|45811941 hsa-miR-874-3p 0 1 0
chr11:45811745|45811941 hsa-miR-6716-5p 0 1 0
chr11:45811745|45811941 hsa-miR-6829-5p 0 1 0
chr11:45811745|45811941 hsa-miR-6732-5p 1 0 0
chr11:45811745|45811941 hsa-miR-6798-5p 1 0 0
chr11:45811745|45811941 hsa-miR-1229-5p 1 1 0
chr11:45811745|45811941 hsa-miR-4691-3p 0 1 0
chr11:45811745|45811941 hsa-miR-6771-5p 1 0 0
chr11:45811745|45811941 hsa-miR-3614-5p 1 0 0
chr11:45811745|45811941 hsa-miR-642b-5p 0 1 0
chr11:45811745|45811941 hsa-miR-7112-5p 1 0 0
chr11:45811745|45811941 hsa-miR-6730-3p 0 1 0
chr11:45811745|45811941 hsa-miR-6719-3p 0 1 0
chr11:45811745|45811941 hsa-miR-2276-5p 0 1 0
chr11:45811745|45811941 hsa-miR-3614-3p 0 1 0
chr11:45811745|45811941 hsa-miR-518c-5p 1 0 0
chr11:45811745|45811941 hsa-miR-3620-3p 0 1 0
chr11:45811745|45811941 hsa-miR-3162-3p 0 1 0
chr11:45811745|45811941 hsa-miR-1233-5p 1 0 0
chr11:45811745|45811941 hsa-miR-1343-5p 1 0 0
chr11:45811745|45811941 hsa-miR-5001-5p 1 0 0
chr11:45811745|45811941 hsa-miR-7107-5p 1 1 0
chr11:45811745|45811941 hsa-miR-1249-5p 1 1 0
chr11:45811745|45811941 hsa-miR-6763-5p 1 1 0
chr11:45811745|45811941 hsa-miR-6797-5p 1 1 0
chr11:45811745|45811941 hsa-miR-3620-5p 1 1 0
chr11:45811745|45811941 hsa-miR-4728-5p 1 0 0
chr11:45811745|45811941 hsa-miR-5189-5p 0 1 0
chr11:45811745|45811941 hsa-miR-6729-5p 1 0 0
chr11:45811745|45811941 hsa-miR-6848-5p 1 0 0
chr11:45811745|45811941 hsa-miR-3187-5p 0 1 0
chr11:45811745|45811941 hsa-miR-3940-5p 1 0 0
chr11:45811745|45811941 hsa-miR-30c-1-3p 1 0 0
chr11:45811745|45811941 hsa-miR-3116 0 1 0
chr11:45811745|45811941 hsa-miR-10398-3p 1 0 0
chr11:45811745|45811941 hsa-miR-6724-5p 1 1 0
chr11:45811745|45811941 hsa-miR-6791-5p 1 1 0
chr11:45811745|45811941 hsa-miR-6862-3p 0 1 0
chr11:45811745|45811941 hsa-miR-6775-3p 1 0 0
chr11:45811745|45811941 hsa-miR-5581-5p 0 1 0
chr11:45811745|45811941 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:45811745|45811941
ORF Type ORF1
Protein Length 56
Nucleotide Length 171
Protein Sequence MPSSPWGSAGVRGNSLISSLSPGHTFLQRKAGLWAQGEAACPPQTEGFPTLSRWLW
Nucleotide Sequence CTGCCCAGCAGCCCCTGGGGATCTGCTGGTGTCAGAGGGAACTCGCTCATTTCCTCCCTCAGTCCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTGCCTGCCCACCGCAGACGGAAGGCTTCCCAACCCTCTCCAGGTGGCTGTGGTAG
CircID chr11:45811745|45811941
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MLVSEGTRSFPPSVQATLSSKGRPVCGPRVRLPAHRRRKASQPSPGGCGRAIS
Nucleotide Sequence CTGCTGGTGTCAGAGGGAACTCGCTCATTTCCTCCCTCAGTCCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTGCCTGCCCACCGCAGACGGAAGGCTTCCCAACCCTCTCCAGGTGGCTGTGGTAGGGCCATCTCC
CircID chr11:45811745|45811941
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MGICWCQRELAHFLPQSRPHFPPKEGRSVGPG
Nucleotide Sequence CTGGGGATCTGCTGGTGTCAGAGGGAACTCGCTCATTTCCTCCCTCAGTCCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGA
CircID chr11:45811745|45811941
ORF Type ORF4
Protein Length 57
Nucleotide Length 171
Protein Sequence MERVGKPSVCGGQAASPWAHRPAFLWRKVWPGLREEMSEFPLTPADPQGLLGSGLGM
Nucleotide Sequence CTGGAGAGGGTTGGGAAGCCTTCCGTCTGCGGTGGGCAGGCAGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGGACTGAGGGAGGAAATGAGCGAGTTCCCTCTGACACCAGCAGATCCCCAGGGGCTGCTGGGCAGTGGCCTGGGAATG
CircID chr11:45811745|45811941
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MGSLPSAVGRQPHPGPTDRPSFGGKCGLD
Nucleotide Sequence TTGGGAAGCCTTCCGTCTGCGGTGGGCAGGCAGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGGACTGA
CircID chr11:45811745|45811941
ORF Type ORF6
Protein Length 64
Nucleotide Length 192
Protein Sequence MALPQPPGEGWEAFRLRWAGSLTLGPQTGLPLEESVAWTEGGNERVPSDTSRSPGAAGQWPGNG
Nucleotide Sequence ATGGCCCTACCACAGCCACCTGGAGAGGGTTGGGAAGCCTTCCGTCTGCGGTGGGCAGGCAGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGGACTGAGGGAGGAAATGAGCGAGTTCCCTCTGACACCAGCAGATCCCCAGGGGCTGCTGGGCAGTGGCCTGGGAATGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab