CircRNA Information

General Information
circRNA Basic Information
CircID chr11:45881659|45882028
Strand +
CircType exon
Host Gene ENSG00000121671.10;
Algorism CIRI2;
Sequence TGCCCCTGGCAGTCCCCATCCCTGAGTCCCTCTGCCTGAGTCCTTGGAGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGACAGGCCCTGGAAGCCAACAGAATAAAGACTAGAATGGTTTCCCTGGCTGGGTGTCAGCTGTCCTCACTGGCAGCACTGTGGTGCCTTGGAGTGTGGCCAGAGAAACCAGGGGGCCTTACGCCACTGCAACCTGGTCTCCTCCTGGTAGAGTGAGTCAGTTTGACCCTTGCCCCTTCACAGCTCCTGGGTAGGCTCTGAGGCTGGCTCTTAGCTTCTGGGGAAGGAACAATGACAGCTGGGATTCTCTTTCTAATTTTAGGTTCTAAATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:45881659|45882028 hsa-miR-326 0 0 1
chr11:45881659|45882028 hsa-miR-345-5p 0 0 1
chr11:45881659|45882028 hsa-miR-345-3p 0 0 1
chr11:45881659|45882028 hsa-miR-422a 0 1 1
chr11:45881659|45882028 hsa-miR-506-5p 0 0 1
chr11:45881659|45882028 hsa-miR-506-3p 0 0 1
chr11:45881659|45882028 hsa-miR-510-5p 0 0 1
chr11:45881659|45882028 hsa-miR-510-3p 0 0 1
chr11:45881659|45882028 hsa-miR-554 0 0 1
chr11:45881659|45882028 hsa-miR-588 0 0 1
chr11:45881659|45882028 hsa-miR-616-5p 0 0 1
chr11:45881659|45882028 hsa-miR-616-3p 0 0 1
chr11:45881659|45882028 hsa-miR-765 0 0 1
chr11:45881659|45882028 hsa-miR-708-5p 0 0 1
chr11:45881659|45882028 hsa-miR-708-3p 0 0 1
chr11:45881659|45882028 hsa-miR-665 1 1 1
chr11:45881659|45882028 hsa-miR-1266-5p 0 0 1
chr11:45881659|45882028 hsa-miR-1266-3p 0 0 1
chr11:45881659|45882028 hsa-miR-1267 0 0 1
chr11:45881659|45882028 hsa-miR-1288-5p 0 0 1
chr11:45881659|45882028 hsa-miR-1288-3p 0 0 1
chr11:45881659|45882028 hsa-miR-512-3p 0 1 1
chr11:45881659|45882028 hsa-miR-1224-5p 0 0 1
chr11:45881659|45882028 hsa-miR-28-5p 0 0 1
chr11:45881659|45882028 hsa-miR-331-3p 0 0 1
chr11:45881659|45882028 hsa-miR-140-3p 0 0 1
chr11:45881659|45882028 hsa-miR-330-5p 0 0 1
chr11:45881659|45882028 hsa-miR-128 0 0 1
chr11:45881659|45882028 hsa-miR-378 0 0 1
chr11:45881659|45882028 hsa-miR-124 0 0 1
chr11:45881659|45882028 hsa-miR-658 1 0 0
chr11:45881659|45882028 hsa-miR-762 1 0 0
chr11:45881659|45882028 hsa-miR-2861 0 1 0
chr11:45881659|45882028 hsa-miR-3131 0 1 0
chr11:45881659|45882028 hsa-miR-378b 0 1 0
chr11:45881659|45882028 hsa-miR-378c 0 1 0
chr11:45881659|45882028 hsa-miR-4313 0 1 0
chr11:45881659|45882028 hsa-miR-4257 1 0 0
chr11:45881659|45882028 hsa-miR-4270 1 0 0
chr11:45881659|45882028 hsa-miR-378e 0 1 0
chr11:45881659|45882028 hsa-miR-378f 0 1 0
chr11:45881659|45882028 hsa-miR-378h 0 1 0
chr11:45881659|45882028 hsa-miR-4518 0 1 0
chr11:45881659|45882028 hsa-miR-3972 1 0 0
chr11:45881659|45882028 hsa-miR-4651 1 0 0
chr11:45881659|45882028 hsa-miR-4663 1 1 0
chr11:45881659|45882028 hsa-miR-4688 1 1 0
chr11:45881659|45882028 hsa-miR-4689 1 0 0
chr11:45881659|45882028 hsa-miR-4692 0 1 0
chr11:45881659|45882028 hsa-miR-4739 1 0 0
chr11:45881659|45882028 hsa-miR-4741 1 0 0
chr11:45881659|45882028 hsa-miR-6085 0 1 0
chr11:45881659|45882028 hsa-miR-8052 0 1 0
chr11:45881659|45882028 hsa-miR-12128 0 1 0
chr11:45881659|45882028 hsa-miR-29b-1-5p 0 1 0
chr11:45881659|45882028 hsa-miR-214-5p 0 1 0
chr11:45881659|45882028 hsa-miR-6840-3p 0 1 0
chr11:45881659|45882028 hsa-miR-500b-3p 0 1 0
chr11:45881659|45882028 hsa-miR-4726-3p 1 0 0
chr11:45881659|45882028 hsa-miR-6765-5p 1 0 0
chr11:45881659|45882028 hsa-miR-216a-5p 0 1 0
chr11:45881659|45882028 hsa-miR-1972 1 0 0
chr11:45881659|45882028 hsa-miR-29b-2-5p 0 1 0
chr11:45881659|45882028 hsa-miR-6728-5p 1 0 0
chr11:45881659|45882028 hsa-miR-3622a-5p 1 0 0
chr11:45881659|45882028 hsa-miR-4786-5p 0 1 0
chr11:45881659|45882028 hsa-miR-6757-5p 1 1 0
chr11:45881659|45882028 hsa-miR-6873-5p 0 1 0
chr11:45881659|45882028 hsa-miR-7847-3p 1 0 0
chr11:45881659|45882028 hsa-miR-4722-5p 1 0 0
chr11:45881659|45882028 hsa-miR-6721-5p 1 0 0
chr11:45881659|45882028 hsa-miR-1178-5p 0 1 0
chr11:45881659|45882028 hsa-miR-4655-5p 1 0 0
chr11:45881659|45882028 hsa-miR-101-5p 0 1 0
chr11:45881659|45882028 hsa-miR-6849-3p 0 1 0
chr11:45881659|45882028 hsa-miR-3151-5p 1 0 0
chr11:45881659|45882028 hsa-miR-6732-5p 1 0 0
chr11:45881659|45882028 hsa-miR-6798-5p 1 0 0
chr11:45881659|45882028 hsa-miR-6881-5p 1 0 0
chr11:45881659|45882028 hsa-miR-2467-3p 1 0 0
chr11:45881659|45882028 hsa-miR-6782-5p 1 1 0
chr11:45881659|45882028 hsa-miR-3194-5p 1 0 0
chr11:45881659|45882028 hsa-miR-3150b-3p 0 1 0
chr11:45881659|45882028 hsa-miR-6858-3p 0 1 0
chr11:45881659|45882028 hsa-miR-5088-5p 1 1 0
chr11:45881659|45882028 hsa-miR-4786-3p 1 0 0
chr11:45881659|45882028 hsa-miR-4640-5p 1 0 0
chr11:45881659|45882028 hsa-miR-619-3p 0 1 0
chr11:45881659|45882028 hsa-miR-3191-5p 0 1 0
chr11:45881659|45882028 hsa-miR-6516-5p 0 1 0
chr11:45881659|45882028 hsa-miR-3690 0 1 0
chr11:45881659|45882028 hsa-miR-149-3p 1 0 0
chr11:45881659|45882028 hsa-miR-4640-3p 1 1 0
chr11:45881659|45882028 hsa-miR-194-3p 0 1 0
chr11:45881659|45882028 hsa-miR-6864-5p 0 1 0
chr11:45881659|45882028 hsa-miR-6895-5p 0 1 0
chr11:45881659|45882028 hsa-miR-423-5p 1 1 0
chr11:45881659|45882028 hsa-miR-2115-5p 0 1 0
chr11:45881659|45882028 hsa-miR-6730-3p 0 1 0
chr11:45881659|45882028 hsa-miR-216a-3p 0 1 0
chr11:45881659|45882028 hsa-miR-7113-5p 0 1 0
chr11:45881659|45882028 hsa-miR-6755-3p 1 1 0
chr11:45881659|45882028 hsa-miR-5004-5p 0 1 0
chr11:45881659|45882028 hsa-miR-3179 0 1 0
chr11:45881659|45882028 hsa-miR-3680-5p 0 1 0
chr11:45881659|45882028 hsa-miR-124-3p 0 1 0
chr11:45881659|45882028 hsa-miR-1207-5p 1 0 0
chr11:45881659|45882028 hsa-miR-4763-3p 1 0 0
chr11:45881659|45882028 hsa-miR-6743-5p 1 1 0
chr11:45881659|45882028 hsa-miR-6752-5p 1 0 0
chr11:45881659|45882028 hsa-miR-6813-5p 1 0 0
chr11:45881659|45882028 hsa-miR-11181-3p 0 1 0
chr11:45881659|45882028 hsa-miR-6722-3p 1 0 0
chr11:45881659|45882028 hsa-miR-6797-5p 1 0 0
chr11:45881659|45882028 hsa-miR-6875-5p 0 1 0
chr11:45881659|45882028 hsa-miR-6879-5p 1 0 0
chr11:45881659|45882028 hsa-miR-4728-5p 1 0 0
chr11:45881659|45882028 hsa-miR-5196-5p 1 0 0
chr11:45881659|45882028 hsa-miR-1909-3p 1 0 0
chr11:45881659|45882028 hsa-miR-4649-5p 1 1 0
chr11:45881659|45882028 hsa-miR-4685-5p 0 1 0
chr11:45881659|45882028 hsa-miR-4726-5p 1 0 0
chr11:45881659|45882028 hsa-miR-6729-5p 1 0 0
chr11:45881659|45882028 hsa-miR-6735-5p 1 0 0
chr11:45881659|45882028 hsa-miR-6794-5p 1 1 0
chr11:45881659|45882028 hsa-miR-6848-5p 0 1 0
chr11:45881659|45882028 hsa-miR-3199 0 1 0
chr11:45881659|45882028 hsa-miR-6511a-5p 1 1 0
chr11:45881659|45882028 hsa-miR-378a-3p 0 1 0
chr11:45881659|45882028 hsa-miR-6791-5p 1 0 0
chr11:45881659|45882028 hsa-miR-5009-5p 0 1 0
chr11:45881659|45882028 hsa-miR-10400-3p 1 0 0
chr11:45881659|45882028 hsa-miR-6837-5p 0 1 0
chr11:45881659|45882028 hsa-miR-9851-3p 0 1 0
chr11:45881659|45882028 hsa-miR-4701-5p 0 1 0
chr11:45881659|45882028 hsa-miR-6817-5p 0 1 0
chr11:45881659|45882028 hsa-miR-378d 0 1 0
chr11:45881659|45882028 hsa-miR-3064-3p 0 1 0
chr11:45881659|45882028 hsa-miR-3681-3p 0 1 0
chr11:45881659|45882028 hsa-miR-4659a-5p 0 1 0
chr11:45881659|45882028 hsa-miR-4659b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:45881659|45882028
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MGVSCPHWQHCGALECGQRNQGALRHCNLVSSW
Nucleotide Sequence CTGGGTGTCAGCTGTCCTCACTGGCAGCACTGTGGTGCCTTGGAGTGTGGCCAGAGAAACCAGGGGGCCTTACGCCACTGCAACCTGGTCTCCTCCTGGTAG
CircID chr11:45881659|45882028
ORF Type ORF2
Protein Length 82
Nucleotide Length 249
Protein Sequence MAVPIPESLCLSPWSSATGIADMAVWMLTSPGQALEANRIKTRMVSLAGCQLSSLAALWCLGVWPEKPGGLTPLQPGLLLVE
Nucleotide Sequence CTGGCAGTCCCCATCCCTGAGTCCCTCTGCCTGAGTCCTTGGAGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGACAGGCCCTGGAAGCCAACAGAATAAAGACTAGAATGGTTTCCCTGGCTGGGTGTCAGCTGTCCTCACTGGCAGCACTGTGGTGCCTTGGAGTGTGGCCAGAGAAACCAGGGGGCCTTACGCCACTGCAACCTGGTCTCCTCCTGGTAGAGTGA
CircID chr11:45881659|45882028
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MTHSTRRRPGCSGVRPPGFSGHTPRHHSAASEDS
Nucleotide Sequence CTGACTCACTCTACCAGGAGGAGACCAGGTTGCAGTGGCGTAAGGCCCCCTGGTTTCTCTGGCCACACTCCAAGGCACCACAGTGCTGCCAGTGAGGACAGCTGA
CircID chr11:45881659|45882028
ORF Type ORF4
Protein Length 40
Nucleotide Length 120
Protein Sequence MLASRACPGLVSIQTAMSAIPVAELQGLRQRDSGMGTARG
Nucleotide Sequence CTGTTGGCTTCCAGGGCCTGTCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCTCCAAGGACTCAGGCAGAGGGACTCAGGGATGGGGACTGCCAGGGGC
CircID chr11:45881659|45882028
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MSLFLPQKLRASLRAYPGAVKGQGSN
Nucleotide Sequence CTGTCATTGTTCCTTCCCCAGAAGCTAAGAGCCAGCCTCAGAGCCTACCCAGGAGCTGTGAAGGGGCAAGGGTCAAACTGA
CircID chr11:45881659|45882028
ORF Type ORF6
Protein Length 26
Nucleotide Length 81
Protein Sequence MVSLATLQGTTVLPVRTADTQPGKPF
Nucleotide Sequence CTGGTTTCTCTGGCCACACTCCAAGGCACCACAGTGCTGCCAGTGAGGACAGCTGACACCCAGCCAGGGAAACCATTCTAG
CircID chr11:45881659|45882028
ORF Type ORF7
Protein Length 35
Nucleotide Length 108
Protein Sequence MTPSQGNHSSLYSVGFQGLSWTCQHPDCHVSYPSS
Nucleotide Sequence CTGACACCCAGCCAGGGAAACCATTCTAGTCTTTATTCTGTTGGCTTCCAGGGCCTGTCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab