CircRNA Information

General Information
circRNA Basic Information
CircID chr11:45914395|45914646
Strand +
CircType exon
Host Gene ENSG00000121680.14;
Algorism CIRI2;
Sequence GTGGGGAAGCGGTCAAACCGGGTGGTGCGAACCCTCCAGAACAGTAAGTGGAGGATGTGGCTGGCCTGGGCACCTAGGTGCTGTCTGCCTGGGCTTGAGGGACTGGCTTTGGTCAGCAGCCACCTTCCCCTGCCCCAGCCTGGGCCTGGCTCGCTCATCTGCCGCCCTTGTGTTCTAGCGCCGTCCCTGCACTCCAGGCACTGGGGAGCTCCCCAGCAGCGGGAGGGACGGCAGCAGCAGCATCACGAGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:45914395|45914646 hsa-miR-122-5p 0 0 1
chr11:45914395|45914646 hsa-miR-122-3p 0 0 1
chr11:45914395|45914646 hsa-miR-452-5p 0 0 1
chr11:45914395|45914646 hsa-miR-452-3p 0 0 1
chr11:45914395|45914646 hsa-miR-519e-5p 0 0 1
chr11:45914395|45914646 hsa-miR-519e-3p 0 0 1
chr11:45914395|45914646 hsa-miR-575 0 0 1
chr11:45914395|45914646 hsa-miR-604 0 0 1
chr11:45914395|45914646 hsa-miR-647 0 0 1
chr11:45914395|45914646 hsa-miR-661 0 0 1
chr11:45914395|45914646 hsa-miR-920 0 0 1
chr11:45914395|45914646 hsa-miR-939-5p 0 0 1
chr11:45914395|45914646 hsa-miR-939-3p 0 0 1
chr11:45914395|45914646 hsa-miR-1299 0 0 1
chr11:45914395|45914646 hsa-miR-1324 0 1 1
chr11:45914395|45914646 hsa-miR-1825 0 0 1
chr11:45914395|45914646 hsa-miR-486-3p 0 0 1
chr11:45914395|45914646 hsa-miR-628-5p 0 0 1
chr11:45914395|45914646 hsa-miR-1207-5p 0 1 1
chr11:45914395|45914646 hsa-miR-515-3p 0 0 1
chr11:45914395|45914646 hsa-miR-220b 0 0 1
chr11:45914395|45914646 hsa-miR-550 0 0 1
chr11:45914395|45914646 hsa-miR-516b 0 0 1
chr11:45914395|45914646 hsa-miR-1254 0 0 1
chr11:45914395|45914646 hsa-miR-638 1 0 0
chr11:45914395|45914646 hsa-miR-762 1 1 0
chr11:45914395|45914646 hsa-miR-1322 0 1 0
chr11:45914395|45914646 hsa-miR-1538 1 1 0
chr11:45914395|45914646 hsa-miR-3135a 1 1 0
chr11:45914395|45914646 hsa-miR-3139 0 1 0
chr11:45914395|45914646 hsa-miR-3141 0 1 0
chr11:45914395|45914646 hsa-miR-3166 0 1 0
chr11:45914395|45914646 hsa-miR-3196 1 0 0
chr11:45914395|45914646 hsa-miR-4298 1 0 0
chr11:45914395|45914646 hsa-miR-3907 1 0 0
chr11:45914395|45914646 hsa-miR-4449 1 0 0
chr11:45914395|45914646 hsa-miR-4533 1 0 0
chr11:45914395|45914646 hsa-miR-3960 1 0 0
chr11:45914395|45914646 hsa-miR-4651 1 0 0
chr11:45914395|45914646 hsa-miR-4673 0 1 0
chr11:45914395|45914646 hsa-miR-4688 1 0 0
chr11:45914395|45914646 hsa-miR-5690 0 1 0
chr11:45914395|45914646 hsa-miR-5708 0 1 0
chr11:45914395|45914646 hsa-miR-5787 1 1 0
chr11:45914395|45914646 hsa-miR-6075 1 0 0
chr11:45914395|45914646 hsa-miR-8089 1 1 0
chr11:45914395|45914646 hsa-miR-9718 0 1 0
chr11:45914395|45914646 hsa-miR-12128 0 1 0
chr11:45914395|45914646 hsa-miR-4747-3p 1 0 0
chr11:45914395|45914646 hsa-miR-93-3p 0 1 0
chr11:45914395|45914646 hsa-miR-4731-5p 0 1 0
chr11:45914395|45914646 hsa-miR-504-3p 0 1 0
chr11:45914395|45914646 hsa-miR-6765-5p 1 0 0
chr11:45914395|45914646 hsa-miR-3150a-3p 0 1 0
chr11:45914395|45914646 hsa-miR-6825-5p 1 0 0
chr11:45914395|45914646 hsa-miR-6894-5p 1 0 0
chr11:45914395|45914646 hsa-miR-1972 1 1 0
chr11:45914395|45914646 hsa-miR-3692-5p 0 1 0
chr11:45914395|45914646 hsa-miR-6515-5p 0 1 0
chr11:45914395|45914646 hsa-miR-6089 1 0 0
chr11:45914395|45914646 hsa-miR-6741-5p 0 1 0
chr11:45914395|45914646 hsa-miR-6762-3p 0 1 0
chr11:45914395|45914646 hsa-miR-6727-5p 1 0 0
chr11:45914395|45914646 hsa-miR-6721-5p 0 1 0
chr11:45914395|45914646 hsa-miR-4728-3p 1 0 0
chr11:45914395|45914646 hsa-miR-6732-5p 1 0 0
chr11:45914395|45914646 hsa-miR-6798-5p 1 0 0
chr11:45914395|45914646 hsa-miR-6765-3p 1 1 0
chr11:45914395|45914646 hsa-miR-3194-5p 1 1 0
chr11:45914395|45914646 hsa-miR-221-3p 1 0 0
chr11:45914395|45914646 hsa-miR-3934-3p 1 0 0
chr11:45914395|45914646 hsa-miR-4783-3p 0 1 0
chr11:45914395|45914646 hsa-miR-4640-5p 1 0 0
chr11:45914395|45914646 hsa-miR-1908-5p 1 0 0
chr11:45914395|45914646 hsa-miR-1228-5p 1 0 0
chr11:45914395|45914646 hsa-miR-4717-3p 1 0 0
chr11:45914395|45914646 hsa-miR-6824-5p 1 0 0
chr11:45914395|45914646 hsa-miR-516b-5p 0 1 0
chr11:45914395|45914646 hsa-miR-3190-5p 1 1 0
chr11:45914395|45914646 hsa-miR-1245b-3p 0 1 0
chr11:45914395|45914646 hsa-miR-4632-3p 0 1 0
chr11:45914395|45914646 hsa-miR-2277-5p 1 0 0
chr11:45914395|45914646 hsa-miR-449b-3p 0 1 0
chr11:45914395|45914646 hsa-miR-4763-3p 1 1 0
chr11:45914395|45914646 hsa-miR-6787-5p 1 0 0
chr11:45914395|45914646 hsa-miR-6816-5p 1 0 0
chr11:45914395|45914646 hsa-miR-6775-5p 0 1 0
chr11:45914395|45914646 hsa-miR-1343-5p 1 1 0
chr11:45914395|45914646 hsa-miR-6726-5p 0 1 0
chr11:45914395|45914646 hsa-miR-6743-5p 1 1 0
chr11:45914395|45914646 hsa-miR-6756-5p 1 0 0
chr11:45914395|45914646 hsa-miR-6815-5p 1 1 0
chr11:45914395|45914646 hsa-miR-6851-5p 1 0 0
chr11:45914395|45914646 hsa-miR-7107-5p 1 0 0
chr11:45914395|45914646 hsa-miR-6722-3p 1 1 0
chr11:45914395|45914646 hsa-miR-6808-5p 1 0 0
chr11:45914395|45914646 hsa-miR-6879-5p 1 1 0
chr11:45914395|45914646 hsa-miR-7111-5p 1 0 0
chr11:45914395|45914646 hsa-miR-5196-5p 1 0 0
chr11:45914395|45914646 hsa-miR-6780b-5p 0 1 0
chr11:45914395|45914646 hsa-miR-6836-5p 1 0 0
chr11:45914395|45914646 hsa-miR-1237-5p 1 0 0
chr11:45914395|45914646 hsa-miR-1909-3p 1 1 0
chr11:45914395|45914646 hsa-miR-328-5p 1 0 0
chr11:45914395|45914646 hsa-miR-4632-5p 1 0 0
chr11:45914395|45914646 hsa-miR-4685-5p 1 1 0
chr11:45914395|45914646 hsa-miR-4725-3p 0 1 0
chr11:45914395|45914646 hsa-miR-4749-5p 0 1 0
chr11:45914395|45914646 hsa-miR-6885-5p 1 0 0
chr11:45914395|45914646 hsa-miR-1271-3p 0 1 0
chr11:45914395|45914646 hsa-miR-3116 0 1 0
chr11:45914395|45914646 hsa-miR-4747-5p 1 1 0
chr11:45914395|45914646 hsa-miR-4667-5p 0 1 0
chr11:45914395|45914646 hsa-miR-550a-3-5p 0 1 0
chr11:45914395|45914646 hsa-miR-550a-5p 0 1 0
chr11:45914395|45914646 hsa-miR-6727-3p 1 0 0
chr11:45914395|45914646 hsa-miR-6893-3p 0 1 0
chr11:45914395|45914646 hsa-miR-33b-3p 0 1 0
chr11:45914395|45914646 hsa-miR-6797-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:45914395|45914646
ORF Type ORF1
Protein Length 66
Nucleotide Length 198
Protein Sequence MWLAWAPRCCLPGLEGLALVSSHLPLPQPGPGSLICRPCVLAPSLHSRHWGAPQQREGRQQQHHEE
Nucleotide Sequence ATGTGGCTGGCCTGGGCACCTAGGTGCTGTCTGCCTGGGCTTGAGGGACTGGCTTTGGTCAGCAGCCACCTTCCCCTGCCCCAGCCTGGGCCTGGCTCGCTCATCTGCCGCCCTTGTGTTCTAGCGCCGTCCCTGCACTCCAGGCACTGGGGAGCTCCCCAGCAGCGGGAGGGACGGCAGCAGCAGCATCACGAGGAG
CircID chr11:45914395|45914646
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MGLRDWLWSAATFPCPSLGLARSSAALVF
Nucleotide Sequence CTGGGCTTGAGGGACTGGCTTTGGTCAGCAGCCACCTTCCCCTGCCCCAGCCTGGGCCTGGCTCGCTCATCTGCCGCCCTTGTGTTCTAG
CircID chr11:45914395|45914646
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MPPLCSSAVPALQALGSSPAAGGTAAAASRG
Nucleotide Sequence CTGCCGCCCTTGTGTTCTAGCGCCGTCCCTGCACTCCAGGCACTGGGGAGCTCCCCAGCAGCGGGAGGGACGGCAGCAGCAGCATCACGAGGA
CircID chr11:45914395|45914646
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MGQGKVAADQSQSLKPRQTAPRCPGQPHPPLTVLEGSHHPV
Nucleotide Sequence CTGGGGCAGGGGAAGGTGGCTGCTGACCAAAGCCAGTCCCTCAAGCCCAGGCAGACAGCACCTAGGTGCCCAGGCCAGCCACATCCTCCACTTACTGTTCTGGAGGGTTCGCACCACCCGGTTTGA
CircID chr11:45914395|45914646
ORF Type ORF5
Protein Length 65
Nucleotide Length 195
Protein Sequence MECRDGARTQGRQMSEPGPGWGRGRWLLTKASPSSPGRQHLGAQASHILHLLFWRVRTTRFDRFP
Nucleotide Sequence CTGGAGTGCAGGGACGGCGCTAGAACACAAGGGCGGCAGATGAGCGAGCCAGGCCCAGGCTGGGGCAGGGGAAGGTGGCTGCTGACCAAAGCCAGTCCCTCAAGCCCAGGCAGACAGCACCTAGGTGCCCAGGCCAGCCACATCCTCCACTTACTGTTCTGGAGGGTTCGCACCACCCGGTTTGACCGCTTCCCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab