CircRNA Information

General Information
circRNA Basic Information
CircID chr11:45926294|45926597
Strand +
CircType exon
Host Gene ENSG00000165905.15;
Algorism CIRI2;
Sequence CTGCTCAGCACCAGGTGGGGGCTGGCTGGGGCACACAAAGAGCTCTCTCCGCAGCAGGTTCCCATCGTACTCCAGGAAGGTCAGGTAGAAATTGCGGAAGAATTCCACATGCTTGTTCTTCACCCGAAGCTTCTTTGGTGAGTTCCAGTGGATCACCTGGGACCCAGGAGGGTGTTGGGGCCATGGGAGCAGGGAGCAGAAGTCTCCATCCATGGCCCCCCACCACCACACAGCCTCTTGTCCCACTCACCTTGAGGTCAGACGCCTCAGAGTAGCAGCGCTCGGCCAGTGTGTGATCTGACAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:45926294|45926597 hsa-miR-185-5p 0 0 1
chr11:45926294|45926597 hsa-miR-185-3p 0 0 1
chr11:45926294|45926597 hsa-miR-370-5p 0 0 1
chr11:45926294|45926597 hsa-miR-370-3p 0 0 1
chr11:45926294|45926597 hsa-miR-377-5p 0 0 1
chr11:45926294|45926597 hsa-miR-377-3p 0 0 1
chr11:45926294|45926597 hsa-miR-193b-5p 0 0 1
chr11:45926294|45926597 hsa-miR-193b-3p 0 0 1
chr11:45926294|45926597 hsa-miR-599 0 0 1
chr11:45926294|45926597 hsa-miR-603 0 0 1
chr11:45926294|45926597 hsa-miR-640 0 0 1
chr11:45926294|45926597 hsa-miR-658 1 0 1
chr11:45926294|45926597 hsa-miR-541-5p 0 0 1
chr11:45926294|45926597 hsa-miR-541-3p 0 0 1
chr11:45926294|45926597 hsa-miR-1292-5p 0 0 1
chr11:45926294|45926597 hsa-miR-1292-3p 0 0 1
chr11:45926294|45926597 hsa-miR-125a-3p 0 1 1
chr11:45926294|45926597 hsa-miR-485-5p 0 1 1
chr11:45926294|45926597 hsa-miR-654-5p 0 0 1
chr11:45926294|45926597 hsa-miR-1224-3p 0 0 1
chr11:45926294|45926597 hsa-miR-490-5p 0 0 1
chr11:45926294|45926597 hsa-miR-767-3p 0 0 1
chr11:45926294|45926597 hsa-miR-876-3p 0 0 1
chr11:45926294|45926597 hsa-miR-1302 0 0 1
chr11:45926294|45926597 hsa-miR-193a-3p 0 0 1
chr11:45926294|45926597 hsa-miR-323-5p 0 0 1
chr11:45926294|45926597 hsa-miR-644 0 0 1
chr11:45926294|45926597 hsa-miR-147 0 0 1
chr11:45926294|45926597 hsa-miR-3122 1 0 0
chr11:45926294|45926597 hsa-miR-4298 1 0 0
chr11:45926294|45926597 hsa-miR-3911 1 0 0
chr11:45926294|45926597 hsa-miR-4651 1 0 0
chr11:45926294|45926597 hsa-miR-4706 1 0 0
chr11:45926294|45926597 hsa-miR-5739 0 1 0
chr11:45926294|45926597 hsa-miR-8064 0 1 0
chr11:45926294|45926597 hsa-miR-92a-2-5p 0 1 0
chr11:45926294|45926597 hsa-miR-4726-3p 0 1 0
chr11:45926294|45926597 hsa-miR-6765-5p 1 1 0
chr11:45926294|45926597 hsa-miR-6858-3p 0 1 0
chr11:45926294|45926597 hsa-miR-1343-3p 0 1 0
chr11:45926294|45926597 hsa-miR-6763-3p 1 0 0
chr11:45926294|45926597 hsa-miR-5010-3p 0 1 0
chr11:45926294|45926597 hsa-miR-6757-3p 0 1 0
chr11:45926294|45926597 hsa-miR-7113-3p 0 1 0
chr11:45926294|45926597 hsa-miR-4667-3p 0 1 0
chr11:45926294|45926597 hsa-miR-149-3p 1 0 0
chr11:45926294|45926597 hsa-miR-7106-3p 0 1 0
chr11:45926294|45926597 hsa-miR-6828-3p 0 1 0
chr11:45926294|45926597 hsa-miR-6793-3p 0 1 0
chr11:45926294|45926597 hsa-miR-6871-3p 0 1 0
chr11:45926294|45926597 hsa-miR-5699-5p 0 1 0
chr11:45926294|45926597 hsa-miR-6509-3p 0 1 0
chr11:45926294|45926597 hsa-miR-6885-3p 0 1 0
chr11:45926294|45926597 hsa-miR-5089-3p 0 1 0
chr11:45926294|45926597 hsa-miR-4802-3p 0 1 0
chr11:45926294|45926597 hsa-miR-6769b-5p 1 1 0
chr11:45926294|45926597 hsa-miR-6778-5p 1 0 0
chr11:45926294|45926597 hsa-miR-1343-5p 1 0 0
chr11:45926294|45926597 hsa-miR-6756-5p 1 1 0
chr11:45926294|45926597 hsa-miR-6803-5p 1 0 0
chr11:45926294|45926597 hsa-miR-10401-5p 1 0 0
chr11:45926294|45926597 hsa-miR-328-5p 1 1 0
chr11:45926294|45926597 hsa-miR-4745-5p 1 0 0
chr11:45926294|45926597 hsa-miR-675-5p 1 0 0
chr11:45926294|45926597 hsa-miR-6795-5p 1 1 0
chr11:45926294|45926597 hsa-miR-6848-5p 1 0 0
chr11:45926294|45926597 hsa-miR-4758-5p 1 1 0
chr11:45926294|45926597 hsa-miR-6791-3p 0 1 0
chr11:45926294|45926597 hsa-miR-6762-5p 0 1 0
chr11:45926294|45926597 hsa-miR-6810-3p 0 1 0
chr11:45926294|45926597 hsa-miR-4756-5p 1 0 0
chr11:45926294|45926597 hsa-miR-5581-5p 0 1 0
chr11:45926294|45926597 hsa-miR-6884-5p 0 1 0
chr11:45926294|45926597 hsa-miR-6864-3p 0 1 0
chr11:45926294|45926597 hsa-miR-6505-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:45926294|45926597
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence LLSTRWGLAGAHKELSPQQVPIVLQEGQVEIAEEFHMLVLHPKLLW
Nucleotide Sequence CTGCTCAGCACCAGGTGGGGGCTGGCTGGGGCACACAAAGAGCTCTCTCCGCAGCAGGTTCCCATCGTACTCCAGGAAGGTCAGGTAGAAATTGCGGAAGAATTCCACATGCTTGTTCTTCACCCGAAGCTTCTTTGGTGA
CircID chr11:45926294|45926597
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MGPRRVLGPWEQGAEVSIHGPPPPHSLLSHSP
Nucleotide Sequence CTGGGACCCAGGAGGGTGTTGGGGCCATGGGAGCAGGGAGCAGAAGTCTCCATCCATGGCCCCCCACCACCACACAGCCTCTTGTCCCACTCACCTTGA
CircID chr11:45926294|45926597
ORF Type ORF3
Protein Length 69
Nucleotide Length 210
Protein Sequence MRKNSTCLFFTRSFFGEFQWITWDPGGCWGHGSREQKSPSMAPHHHTASCPTHLEVRRLRVAALGQCVI
Nucleotide Sequence TTGCGGAAGAATTCCACATGCTTGTTCTTCACCCGAAGCTTCTTTGGTGAGTTCCAGTGGATCACCTGGGACCCAGGAGGGTGTTGGGGCCATGGGAGCAGGGAGCAGAAGTCTCCATCCATGGCCCCCCACCACCACACAGCCTCTTGTCCCACTCACCTTGAGGTCAGACGCCTCAGAGTAGCAGCGCTCGGCCAGTGTGTGATCTGA
CircID chr11:45926294|45926597
ORF Type ORF4
Protein Length 46
Nucleotide Length 141
Protein Sequence MVSSSGSPGTQEGVGAMGAGSRSLHPWPPTTTQPLVPLTLRSDASE
Nucleotide Sequence TTGGTGAGTTCCAGTGGATCACCTGGGACCCAGGAGGGTGTTGGGGCCATGGGAGCAGGGAGCAGAAGTCTCCATCCATGGCCCCCCACCACCACACAGCCTCTTGTCCCACTCACCTTGAGGTCAGACGCCTCAGAGTAG
CircID chr11:45926294|45926597
ORF Type ORF5
Protein Length 99
Nucleotide Length 300
Protein Sequence LSDHTLAERCYSEASDLKVSGTRGCVVVGGHGWRLLLPAPMAPTPSWVPGDPLELTKEASGEEQACGILPQFLPDLPGVRWEPAAERALCVPQPAPTWC
Nucleotide Sequence CTGTCAGATCACACACTGGCCGAGCGCTGCTACTCTGAGGCGTCTGACCTCAAGGTGAGTGGGACAAGAGGCTGTGTGGTGGTGGGGGGCCATGGATGGAGACTTCTGCTCCCTGCTCCCATGGCCCCAACACCCTCCTGGGTCCCAGGTGATCCACTGGAACTCACCAAAGAAGCTTCGGGTGAAGAACAAGCATGTGGAATTCTTCCGCAATTTCTACCTGACCTTCCTGGAGTACGATGGGAACCTGCTGCGGAGAGAGCTCTTTGTGTGCCCCAGCCAGCCCCCACCTGGTGCTGA
CircID chr11:45926294|45926597
ORF Type ORF6
Protein Length 71
Nucleotide Length 213
Protein Sequence MDGDFCSLLPWPQHPPGSQVIHWNSPKKLRVKNKHVEFFRNFYLTFLEYDGNLLRRELFVCPSQPPPGAEQ
Nucleotide Sequence ATGGATGGAGACTTCTGCTCCCTGCTCCCATGGCCCCAACACCCTCCTGGGTCCCAGGTGATCCACTGGAACTCACCAAAGAAGCTTCGGGTGAAGAACAAGCATGTGGAATTCTTCCGCAATTTCTACCTGACCTTCCTGGAGTACGATGGGAACCTGCTGCGGAGAGAGCTCTTTGTGTGCCCCAGCCAGCCCCCACCTGGTGCTGAGCAG
CircID chr11:45926294|45926597
ORF Type ORF7
Protein Length 26
Nucleotide Length 81
Protein Sequence MCGGGGPWMETSAPCSHGPNTLLGPR
Nucleotide Sequence CTGTGTGGTGGTGGGGGGCCATGGATGGAGACTTCTGCTCCCTGCTCCCATGGCCCCAACACCCTCCTGGGTCCCAGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab