CircRNA Information

General Information
circRNA Basic Information
CircID chr11:46678022|46678319
Strand -
CircType exon
Host Gene ENSG00000175220.10;
Algorism CIRI2;
Sequence CTATCAGCACAATCTCTGCCCCTCCTACGGGCACTCTTAGTCTCTACCCCAGCCCCTTTAAGAGTCCCCCAGCTGGAGGAAGGAGCCATAAGATCCTGAGGCACTGAGTCACCTCTGGCTGGGGCAGGGGCCAGTGTGACTCCGTAACAGACAGGTCCACAAGAACATGAAGGCTGATGATCTGCCCGTGTGGGAAAGGAGGCCAAGAGGGGAGAGGCTAACCTGGCCGGTCACTGATTCCATCACACGCTGTAGCTCTCGGGGGCGGGGAGGTGGAGAGGGAGGTTTCAAGTGGATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:46678022|46678319 hsa-miR-148a-5p 0 0 1
chr11:46678022|46678319 hsa-miR-148a-3p 0 0 1
chr11:46678022|46678319 hsa-miR-205-5p 0 0 1
chr11:46678022|46678319 hsa-miR-205-3p 0 0 1
chr11:46678022|46678319 hsa-miR-152-5p 0 0 1
chr11:46678022|46678319 hsa-miR-152-3p 0 0 1
chr11:46678022|46678319 hsa-miR-135b-5p 0 0 1
chr11:46678022|46678319 hsa-miR-135b-3p 0 0 1
chr11:46678022|46678319 hsa-miR-148b-5p 0 0 1
chr11:46678022|46678319 hsa-miR-148b-3p 0 0 1
chr11:46678022|46678319 hsa-miR-492 0 0 1
chr11:46678022|46678319 hsa-miR-193b-5p 0 0 1
chr11:46678022|46678319 hsa-miR-193b-3p 0 0 1
chr11:46678022|46678319 hsa-miR-519e-5p 0 0 1
chr11:46678022|46678319 hsa-miR-519e-3p 0 0 1
chr11:46678022|46678319 hsa-miR-578 0 0 1
chr11:46678022|46678319 hsa-miR-581 0 0 1
chr11:46678022|46678319 hsa-miR-602 0 1 1
chr11:46678022|46678319 hsa-miR-625-5p 0 0 1
chr11:46678022|46678319 hsa-miR-625-3p 0 0 1
chr11:46678022|46678319 hsa-miR-637 0 1 1
chr11:46678022|46678319 hsa-miR-766-5p 0 0 1
chr11:46678022|46678319 hsa-miR-766-3p 0 0 1
chr11:46678022|46678319 hsa-miR-1275 0 0 1
chr11:46678022|46678319 hsa-miR-486-3p 0 0 1
chr11:46678022|46678319 hsa-miR-423-5p 1 1 1
chr11:46678022|46678319 hsa-miR-1207-3p 0 0 1
chr11:46678022|46678319 hsa-miR-188-3p 0 0 1
chr11:46678022|46678319 hsa-miR-324-3p 0 0 1
chr11:46678022|46678319 hsa-miR-515-3p 0 0 1
chr11:46678022|46678319 hsa-miR-193a-3p 0 0 1
chr11:46678022|46678319 hsa-miR-1260 0 0 1
chr11:46678022|46678319 hsa-miR-642 0 0 1
chr11:46678022|46678319 hsa-miR-135a 0 0 1
chr11:46678022|46678319 hsa-miR-218 0 0 1
chr11:46678022|46678319 hsa-miR-762 1 1 0
chr11:46678022|46678319 hsa-miR-1470 1 0 0
chr11:46678022|46678319 hsa-miR-1913 1 1 0
chr11:46678022|46678319 hsa-miR-2861 1 0 0
chr11:46678022|46678319 hsa-miR-3132 0 1 0
chr11:46678022|46678319 hsa-miR-3154 1 0 0
chr11:46678022|46678319 hsa-miR-3615 1 0 0
chr11:46678022|46678319 hsa-miR-4421 0 1 0
chr11:46678022|46678319 hsa-miR-4448 0 1 0
chr11:46678022|46678319 hsa-miR-4451 0 1 0
chr11:46678022|46678319 hsa-miR-3689c 0 1 0
chr11:46678022|46678319 hsa-miR-4498 1 0 0
chr11:46678022|46678319 hsa-miR-4505 0 1 0
chr11:46678022|46678319 hsa-miR-4507 1 0 0
chr11:46678022|46678319 hsa-miR-4508 1 0 0
chr11:46678022|46678319 hsa-miR-4535 0 1 0
chr11:46678022|46678319 hsa-miR-1587 1 0 0
chr11:46678022|46678319 hsa-miR-4651 1 0 0
chr11:46678022|46678319 hsa-miR-4656 1 0 0
chr11:46678022|46678319 hsa-miR-4688 0 1 0
chr11:46678022|46678319 hsa-miR-4736 1 0 0
chr11:46678022|46678319 hsa-miR-4741 1 0 0
chr11:46678022|46678319 hsa-miR-4754 1 0 0
chr11:46678022|46678319 hsa-miR-5090 1 0 0
chr11:46678022|46678319 hsa-miR-5094 0 1 0
chr11:46678022|46678319 hsa-miR-5190 1 1 0
chr11:46678022|46678319 hsa-miR-5193 1 0 0
chr11:46678022|46678319 hsa-miR-5787 1 0 0
chr11:46678022|46678319 hsa-miR-6069 1 0 0
chr11:46678022|46678319 hsa-miR-6085 1 1 0
chr11:46678022|46678319 hsa-miR-6086 1 0 0
chr11:46678022|46678319 hsa-miR-8089 1 0 0
chr11:46678022|46678319 hsa-miR-12118 0 1 0
chr11:46678022|46678319 hsa-miR-6749-3p 1 0 0
chr11:46678022|46678319 hsa-miR-4731-5p 0 1 0
chr11:46678022|46678319 hsa-miR-4726-3p 1 0 0
chr11:46678022|46678319 hsa-miR-149-5p 0 1 0
chr11:46678022|46678319 hsa-miR-6892-3p 1 1 0
chr11:46678022|46678319 hsa-miR-210-5p 0 1 0
chr11:46678022|46678319 hsa-miR-6881-3p 1 1 0
chr11:46678022|46678319 hsa-miR-24-3p 0 1 0
chr11:46678022|46678319 hsa-miR-6721-5p 1 0 0
chr11:46678022|46678319 hsa-miR-197-5p 1 1 0
chr11:46678022|46678319 hsa-miR-7110-3p 1 1 0
chr11:46678022|46678319 hsa-miR-6845-3p 1 0 0
chr11:46678022|46678319 hsa-miR-877-3p 1 1 0
chr11:46678022|46678319 hsa-miR-4697-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6829-5p 1 0 0
chr11:46678022|46678319 hsa-miR-4655-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6805-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6782-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6735-3p 1 0 0
chr11:46678022|46678319 hsa-miR-4436b-5p 1 1 0
chr11:46678022|46678319 hsa-miR-7109-3p 1 1 0
chr11:46678022|46678319 hsa-miR-6803-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6757-3p 0 1 0
chr11:46678022|46678319 hsa-miR-7113-3p 1 1 0
chr11:46678022|46678319 hsa-miR-1228-5p 1 0 0
chr11:46678022|46678319 hsa-miR-296-3p 1 0 0
chr11:46678022|46678319 hsa-miR-3667-3p 0 1 0
chr11:46678022|46678319 hsa-miR-3677-3p 1 0 0
chr11:46678022|46678319 hsa-miR-659-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6821-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6878-3p 0 1 0
chr11:46678022|46678319 hsa-miR-7111-3p 1 1 0
chr11:46678022|46678319 hsa-miR-149-3p 1 1 0
chr11:46678022|46678319 hsa-miR-1306-5p 0 1 0
chr11:46678022|46678319 hsa-miR-7843-3p 0 1 0
chr11:46678022|46678319 hsa-miR-7112-5p 0 1 0
chr11:46678022|46678319 hsa-miR-211-5p 1 0 0
chr11:46678022|46678319 hsa-miR-1237-3p 1 0 0
chr11:46678022|46678319 hsa-miR-1236-3p 1 1 0
chr11:46678022|46678319 hsa-miR-873-3p 0 1 0
chr11:46678022|46678319 hsa-miR-6867-3p 0 1 0
chr11:46678022|46678319 hsa-miR-6887-3p 1 0 0
chr11:46678022|46678319 hsa-miR-1224-3p 1 1 0
chr11:46678022|46678319 hsa-miR-6752-3p 0 1 0
chr11:46678022|46678319 hsa-miR-3614-3p 0 1 0
chr11:46678022|46678319 hsa-miR-6895-3p 1 1 0
chr11:46678022|46678319 hsa-miR-6865-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6826-3p 0 1 0
chr11:46678022|46678319 hsa-miR-6795-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6880-3p 1 0 0
chr11:46678022|46678319 hsa-miR-1229-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6515-3p 1 1 0
chr11:46678022|46678319 hsa-miR-3675-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6812-3p 1 0 0
chr11:46678022|46678319 hsa-miR-642a-5p 1 1 0
chr11:46678022|46678319 hsa-miR-6800-3p 1 0 0
chr11:46678022|46678319 hsa-miR-3689b-3p 0 1 0
chr11:46678022|46678319 hsa-miR-4763-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6787-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6812-5p 1 0 0
chr11:46678022|46678319 hsa-miR-5001-5p 1 1 0
chr11:46678022|46678319 hsa-miR-6726-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6743-5p 1 1 0
chr11:46678022|46678319 hsa-miR-6756-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6803-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6813-5p 1 1 0
chr11:46678022|46678319 hsa-miR-6819-5p 1 0 0
chr11:46678022|46678319 hsa-miR-1249-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6779-5p 1 1 0
chr11:46678022|46678319 hsa-miR-3127-3p 1 0 0
chr11:46678022|46678319 hsa-miR-320a-5p 1 0 0
chr11:46678022|46678319 hsa-miR-4685-3p 1 0 0
chr11:46678022|46678319 hsa-miR-3620-5p 1 0 0
chr11:46678022|46678319 hsa-miR-4728-5p 1 0 0
chr11:46678022|46678319 hsa-miR-10526-3p 1 1 0
chr11:46678022|46678319 hsa-miR-328-5p 1 1 0
chr11:46678022|46678319 hsa-miR-6795-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6846-5p 1 0 0
chr11:46678022|46678319 hsa-miR-6848-5p 1 0 0
chr11:46678022|46678319 hsa-miR-939-5p 1 0 0
chr11:46678022|46678319 hsa-miR-365a-5p 1 0 0
chr11:46678022|46678319 hsa-miR-3940-5p 1 0 0
chr11:46678022|46678319 hsa-miR-7843-5p 1 0 0
chr11:46678022|46678319 hsa-miR-4665-5p 0 1 0
chr11:46678022|46678319 hsa-miR-6791-3p 0 1 0
chr11:46678022|46678319 hsa-miR-6877-3p 1 1 0
chr11:46678022|46678319 hsa-miR-6785-5p 1 0 0
chr11:46678022|46678319 hsa-miR-3184-5p 0 1 0
chr11:46678022|46678319 hsa-miR-6756-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6792-3p 1 0 0
chr11:46678022|46678319 hsa-miR-10401-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6810-3p 0 1 0
chr11:46678022|46678319 hsa-miR-6829-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6775-3p 1 0 0
chr11:46678022|46678319 hsa-miR-3059-5p 1 0 0
chr11:46678022|46678319 hsa-miR-4723-3p 1 1 0
chr11:46678022|46678319 hsa-miR-6511b-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6769b-3p 1 0 0
chr11:46678022|46678319 hsa-miR-6819-3p 0 1 0
chr11:46678022|46678319 hsa-miR-6823-3p 1 0 0
chr11:46678022|46678319 hsa-miR-33b-3p 0 1 0
chr11:46678022|46678319 hsa-miR-6781-3p 1 1 0
chr11:46678022|46678319 hsa-miR-6833-3p 0 1 0
chr11:46678022|46678319 hsa-miR-7162-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:46678022|46678319
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MPLLRALLVSTPAPLRVPQLEEGAIRS
Nucleotide Sequence CTGCCCCTCCTACGGGCACTCTTAGTCTCTACCCCAGCCCCTTTAAGAGTCCCCCAGCTGGAGGAAGGAGCCATAAGATCCTGA
CircID chr11:46678022|46678319
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MKADDLPVWERRPRGERLTWPVTDSITRCSSRGRGGGEGGFKWM
Nucleotide Sequence ATGAAGGCTGATGATCTGCCCGTGTGGGAAAGGAGGCCAAGAGGGGAGAGGCTAACCTGGCCGGTCACTGATTCCATCACACGCTGTAGCTCTCGGGGGCGGGGAGGTGGAGAGGGAGGTTTCAAGTGGATG
CircID chr11:46678022|46678319
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MSVTESHWPLPQPEVTQCLRILWLLPPAGGLLKGLG
Nucleotide Sequence CTGTCTGTTACGGAGTCACACTGGCCCCTGCCCCAGCCAGAGGTGACTCAGTGCCTCAGGATCTTATGGCTCCTTCCTCCAGCTGGGGGACTCTTAAAGGGGCTGGGGTAG
CircID chr11:46678022|46678319
ORF Type ORF4
Protein Length 60
Nucleotide Length 183
Protein Sequence MKPPSPPPRPRELQRVMESVTGQVSLSPLGLLSHTGRSSAFMFLWTCLLRSHTGPCPSQR
Nucleotide Sequence TTGAAACCTCCCTCTCCACCTCCCCGCCCCCGAGAGCTACAGCGTGTGATGGAATCAGTGACCGGCCAGGTTAGCCTCTCCCCTCTTGGCCTCCTTTCCCACACGGGCAGATCATCAGCCTTCATGTTCTTGTGGACCTGTCTGTTACGGAGTCACACTGGCCCCTGCCCCAGCCAGAGGTGA
CircID chr11:46678022|46678319
ORF Type ORF5
Protein Length 68
Nucleotide Length 204
Protein Sequence MASFPTRADHQPSCSCGPVCYGVTLAPAPARGDSVPQDLMAPSSSWGTLKGAGVETKSARRRGRDCAD
Nucleotide Sequence TTGGCCTCCTTTCCCACACGGGCAGATCATCAGCCTTCATGTTCTTGTGGACCTGTCTGTTACGGAGTCACACTGGCCCCTGCCCCAGCCAGAGGTGACTCAGTGCCTCAGGATCTTATGGCTCCTTCCTCCAGCTGGGGGACTCTTAAAGGGGCTGGGGTAGAGACTAAGAGTGCCCGTAGGAGGGGCAGAGATTGTGCTGAT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab