CircRNA Information

General Information
circRNA Basic Information
CircID chr11:47161620|47161827
Strand -
CircType exon
Host Gene ENSG00000149179.12;
Algorism CIRI2;
Sequence AGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCCACCCAGCCTCCTCTCCAGCACCTTGCTGTGCTGCCCTCTGCTGCTGACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:47161620|47161827 hsa-miR-15a-5p 0 0 1
chr11:47161620|47161827 hsa-miR-15a-3p 0 0 1
chr11:47161620|47161827 hsa-miR-18a-5p 0 0 1
chr11:47161620|47161827 hsa-miR-18a-3p 0 0 1
chr11:47161620|47161827 hsa-miR-214-5p 0 0 1
chr11:47161620|47161827 hsa-miR-214-3p 0 0 1
chr11:47161620|47161827 hsa-miR-15b-5p 0 0 1
chr11:47161620|47161827 hsa-miR-15b-3p 0 0 1
chr11:47161620|47161827 hsa-miR-149-5p 0 0 1
chr11:47161620|47161827 hsa-miR-149-3p 0 0 1
chr11:47161620|47161827 hsa-miR-185-5p 0 0 1
chr11:47161620|47161827 hsa-miR-185-3p 0 0 1
chr11:47161620|47161827 hsa-miR-195-5p 0 0 1
chr11:47161620|47161827 hsa-miR-195-3p 0 0 1
chr11:47161620|47161827 hsa-miR-424-5p 0 0 1
chr11:47161620|47161827 hsa-miR-424-3p 0 0 1
chr11:47161620|47161827 hsa-miR-18b-5p 0 0 1
chr11:47161620|47161827 hsa-miR-18b-3p 0 0 1
chr11:47161620|47161827 hsa-miR-497-5p 0 0 1
chr11:47161620|47161827 hsa-miR-497-3p 0 0 1
chr11:47161620|47161827 hsa-miR-635 0 0 1
chr11:47161620|47161827 hsa-miR-892b 0 0 1
chr11:47161620|47161827 hsa-miR-541-5p 0 0 1
chr11:47161620|47161827 hsa-miR-541-3p 0 0 1
chr11:47161620|47161827 hsa-miR-920 0 0 1
chr11:47161620|47161827 hsa-miR-922 0 1 1
chr11:47161620|47161827 hsa-miR-1286 0 0 1
chr11:47161620|47161827 hsa-miR-1287-5p 0 0 1
chr11:47161620|47161827 hsa-miR-1287-3p 0 0 1
chr11:47161620|47161827 hsa-miR-1293 0 0 1
chr11:47161620|47161827 hsa-miR-1225-3p 0 1 1
chr11:47161620|47161827 hsa-miR-485-5p 0 0 1
chr11:47161620|47161827 hsa-miR-654-5p 0 0 1
chr11:47161620|47161827 hsa-miR-16 0 0 1
chr11:47161620|47161827 hsa-miR-1269 0 0 1
chr11:47161620|47161827 hsa-miR-612 1 1 0
chr11:47161620|47161827 hsa-miR-637 1 0 0
chr11:47161620|47161827 hsa-miR-762 1 1 0
chr11:47161620|47161827 hsa-miR-936 0 1 0
chr11:47161620|47161827 hsa-miR-3131 1 0 0
chr11:47161620|47161827 hsa-miR-3141 1 0 0
chr11:47161620|47161827 hsa-miR-4259 1 0 0
chr11:47161620|47161827 hsa-miR-3665 1 1 0
chr11:47161620|47161827 hsa-miR-3945 1 0 0
chr11:47161620|47161827 hsa-miR-378g 0 1 0
chr11:47161620|47161827 hsa-miR-3135b 0 1 0
chr11:47161620|47161827 hsa-miR-4492 1 1 0
chr11:47161620|47161827 hsa-miR-4498 1 1 0
chr11:47161620|47161827 hsa-miR-4505 1 1 0
chr11:47161620|47161827 hsa-miR-4507 1 0 0
chr11:47161620|47161827 hsa-miR-4508 1 0 0
chr11:47161620|47161827 hsa-miR-1587 1 1 0
chr11:47161620|47161827 hsa-miR-4651 1 0 0
chr11:47161620|47161827 hsa-miR-4656 1 1 0
chr11:47161620|47161827 hsa-miR-4675 1 1 0
chr11:47161620|47161827 hsa-miR-4688 1 0 0
chr11:47161620|47161827 hsa-miR-4706 1 0 0
chr11:47161620|47161827 hsa-miR-4739 1 0 0
chr11:47161620|47161827 hsa-miR-4741 1 0 0
chr11:47161620|47161827 hsa-miR-5090 1 0 0
chr11:47161620|47161827 hsa-miR-5572 1 0 0
chr11:47161620|47161827 hsa-miR-5787 1 1 0
chr11:47161620|47161827 hsa-miR-6081 1 1 0
chr11:47161620|47161827 hsa-miR-6085 1 1 0
chr11:47161620|47161827 hsa-miR-6086 1 0 0
chr11:47161620|47161827 hsa-miR-6090 1 0 0
chr11:47161620|47161827 hsa-miR-8052 1 0 0
chr11:47161620|47161827 hsa-miR-8089 1 0 0
chr11:47161620|47161827 hsa-miR-150-3p 1 0 0
chr11:47161620|47161827 hsa-miR-6861-5p 1 0 0
chr11:47161620|47161827 hsa-miR-7106-5p 1 0 0
chr11:47161620|47161827 hsa-miR-4687-3p 1 0 0
chr11:47161620|47161827 hsa-miR-6799-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6510-5p 1 1 0
chr11:47161620|47161827 hsa-miR-6089 1 0 0
chr11:47161620|47161827 hsa-miR-4695-5p 1 1 0
chr11:47161620|47161827 hsa-miR-3064-5p 1 1 0
chr11:47161620|47161827 hsa-miR-6741-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6727-5p 1 1 0
chr11:47161620|47161827 hsa-miR-4474-3p 1 1 0
chr11:47161620|47161827 hsa-miR-6842-3p 1 1 0
chr11:47161620|47161827 hsa-miR-6721-5p 0 1 0
chr11:47161620|47161827 hsa-miR-197-5p 1 0 0
chr11:47161620|47161827 hsa-miR-5589-5p 0 1 0
chr11:47161620|47161827 hsa-miR-6776-5p 0 1 0
chr11:47161620|47161827 hsa-miR-3663-5p 0 1 0
chr11:47161620|47161827 hsa-miR-6742-5p 1 0 0
chr11:47161620|47161827 hsa-miR-1292-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6748-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6772-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6793-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6827-5p 1 0 0
chr11:47161620|47161827 hsa-miR-486-3p 1 1 0
chr11:47161620|47161827 hsa-miR-2467-3p 0 1 0
chr11:47161620|47161827 hsa-miR-6782-5p 1 0 0
chr11:47161620|47161827 hsa-miR-1226-5p 1 0 0
chr11:47161620|47161827 hsa-miR-1229-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6784-5p 0 1 0
chr11:47161620|47161827 hsa-miR-6753-5p 1 0 0
chr11:47161620|47161827 hsa-miR-1228-5p 1 0 0
chr11:47161620|47161827 hsa-miR-296-3p 1 1 0
chr11:47161620|47161827 hsa-miR-4732-5p 1 0 0
chr11:47161620|47161827 hsa-miR-4446-3p 1 1 0
chr11:47161620|47161827 hsa-miR-202-3p 1 0 0
chr11:47161620|47161827 hsa-miR-6824-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6769a-3p 0 1 0
chr11:47161620|47161827 hsa-miR-7112-5p 1 0 0
chr11:47161620|47161827 hsa-miR-7846-3p 1 0 0
chr11:47161620|47161827 hsa-miR-1225-5p 1 0 0
chr11:47161620|47161827 hsa-miR-3120-3p 0 1 0
chr11:47161620|47161827 hsa-miR-4529-3p 0 1 0
chr11:47161620|47161827 hsa-miR-6851-3p 0 1 0
chr11:47161620|47161827 hsa-miR-1207-5p 1 0 0
chr11:47161620|47161827 hsa-miR-1233-5p 1 1 0
chr11:47161620|47161827 hsa-miR-6769b-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6778-5p 1 1 0
chr11:47161620|47161827 hsa-miR-6816-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6893-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6775-5p 1 0 0
chr11:47161620|47161827 hsa-miR-5001-5p 1 1 0
chr11:47161620|47161827 hsa-miR-6726-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6743-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6752-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6754-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6756-5p 1 1 0
chr11:47161620|47161827 hsa-miR-6769a-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6803-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6813-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6819-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6851-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6763-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6779-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6879-5p 1 1 0
chr11:47161620|47161827 hsa-miR-3620-5p 1 1 0
chr11:47161620|47161827 hsa-miR-5189-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6836-5p 1 1 0
chr11:47161620|47161827 hsa-miR-10526-3p 1 0 0
chr11:47161620|47161827 hsa-miR-1909-3p 1 0 0
chr11:47161620|47161827 hsa-miR-328-5p 1 0 0
chr11:47161620|47161827 hsa-miR-4632-5p 1 1 0
chr11:47161620|47161827 hsa-miR-4685-5p 1 0 0
chr11:47161620|47161827 hsa-miR-4749-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6735-5p 0 1 0
chr11:47161620|47161827 hsa-miR-6846-5p 1 1 0
chr11:47161620|47161827 hsa-miR-6848-5p 1 1 0
chr11:47161620|47161827 hsa-miR-6858-5p 1 0 0
chr11:47161620|47161827 hsa-miR-4436b-3p 0 1 0
chr11:47161620|47161827 hsa-miR-1238-5p 1 0 0
chr11:47161620|47161827 hsa-miR-4758-5p 1 0 0
chr11:47161620|47161827 hsa-miR-1266-5p 1 0 0
chr11:47161620|47161827 hsa-miR-3940-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6736-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6855-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6766-5p 1 1 0
chr11:47161620|47161827 hsa-miR-5591-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6762-5p 1 0 0
chr11:47161620|47161827 hsa-miR-6504-5p 0 1 0
chr11:47161620|47161827 hsa-miR-6838-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:47161620|47161827
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MRSPKGPAHSALYLLPPSPWCAHPASSPAPCCAALCC
Nucleotide Sequence TTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCCACCCAGCCTCCTCTCCAGCACCTTGCTGTGCTGCCCTCTGCTGCTGA
CircID chr11:47161620|47161827
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence MPTAPCTCSHPALGVPTQPPLQHLAVLPSAADKVNNSPKTSQRGSDDQPSQWPRKVNG
Nucleotide Sequence CTGCCCACAGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCCACCCAGCCTCCTCTCCAGCACCTTGCTGTGCTGCCCTCTGCTGCTGACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGC
CircID chr11:47161620|47161827
ORF Type ORF3
Protein Length 62
Nucleotide Length 186
Protein Sequence MAGLIIRAPLAGLGAVIHLVSSRGQHSKVLERRLGGHTKGWVGAGTGRCGQDPLDSSSLRLV
Nucleotide Sequence CTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTCTTGGGGCTGTTATTCACCTTGTCAGCAGCAGAGGGCAGCACAGCAAGGTGCTGGAGAGGAGGCTGGGTGGGCACACCAAGGGCTGGGTGGGAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTC
CircID chr11:47161620|47161827
ORF Type ORF4
Protein Length 52
Nucleotide Length 156
Protein Sequence MVLGLLFTLSAAEGSTARCWRGGWVGTPRAGWEQVQGAVGRTLWTPQVSDSS
Nucleotide Sequence CTGGTCTTGGGGCTGTTATTCACCTTGTCAGCAGCAGAGGGCAGCACAGCAAGGTGCTGGAGAGGAGGCTGGGTGGGCACACCAAGGGCTGGGTGGGAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab