CircRNA Information

General Information
circRNA Basic Information
CircID chr11:47176581|47176861
Strand -
CircType exon
Host Gene ENSG00000149182.13;
Algorism CIRI2;
Sequence ACCGTACGTGATGCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAAACAGGCCTGGGTGGAGGCGGCGATGAGCGAATCGTCAGGGGCCCCGAGTAAAGGCCAGGCACCGACACCCCAGAAACATAACCCACCTCCGCCCTTCTCCCTCCCTCAGGCCCCAGCGGGACGAGAGACTCCGCGCGCCCCCTGCTCACGCACCTTGTTGGTTGGAACTGCGCGAAGCCTCTTAAAAAGAGTCTGGATTTCGGTCTTGTTCGGCTCCGCCGCCATTTTCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:47176581|47176861 hsa-miR-18a-5p 0 0 1
chr11:47176581|47176861 hsa-miR-18a-3p 0 0 1
chr11:47176581|47176861 hsa-miR-18b-5p 0 0 1
chr11:47176581|47176861 hsa-miR-18b-3p 0 0 1
chr11:47176581|47176861 hsa-miR-571 0 0 1
chr11:47176581|47176861 hsa-miR-608 1 0 1
chr11:47176581|47176861 hsa-miR-624-5p 0 0 1
chr11:47176581|47176861 hsa-miR-624-3p 0 0 1
chr11:47176581|47176861 hsa-miR-637 1 0 1
chr11:47176581|47176861 hsa-miR-661 1 0 1
chr11:47176581|47176861 hsa-miR-658 1 0 1
chr11:47176581|47176861 hsa-miR-1250-5p 0 0 1
chr11:47176581|47176861 hsa-miR-1250-3p 0 0 1
chr11:47176581|47176861 hsa-miR-1281 0 0 1
chr11:47176581|47176861 hsa-miR-1321 0 0 1
chr11:47176581|47176861 hsa-miR-296-5p 0 0 1
chr11:47176581|47176861 hsa-miR-338-3p 0 1 1
chr11:47176581|47176861 hsa-miR-342-5p 0 0 1
chr11:47176581|47176861 hsa-miR-550 0 0 1
chr11:47176581|47176861 hsa-miR-1254 0 0 1
chr11:47176581|47176861 hsa-miR-663a 1 0 0
chr11:47176581|47176861 hsa-miR-762 1 0 0
chr11:47176581|47176861 hsa-miR-1181 1 1 0
chr11:47176581|47176861 hsa-miR-1268a 1 0 0
chr11:47176581|47176861 hsa-miR-2861 1 1 0
chr11:47176581|47176861 hsa-miR-3141 1 0 0
chr11:47176581|47176861 hsa-miR-3154 1 1 0
chr11:47176581|47176861 hsa-miR-3188 1 1 0
chr11:47176581|47176861 hsa-miR-3196 1 0 0
chr11:47176581|47176861 hsa-miR-4259 1 1 0
chr11:47176581|47176861 hsa-miR-1268b 1 0 0
chr11:47176581|47176861 hsa-miR-4467 1 0 0
chr11:47176581|47176861 hsa-miR-4488 1 0 0
chr11:47176581|47176861 hsa-miR-4507 1 0 0
chr11:47176581|47176861 hsa-miR-4510 1 1 0
chr11:47176581|47176861 hsa-miR-4516 1 1 0
chr11:47176581|47176861 hsa-miR-4537 0 1 0
chr11:47176581|47176861 hsa-miR-3960 1 0 0
chr11:47176581|47176861 hsa-miR-4651 1 0 0
chr11:47176581|47176861 hsa-miR-4656 1 0 0
chr11:47176581|47176861 hsa-miR-4730 1 0 0
chr11:47176581|47176861 hsa-miR-4739 1 1 0
chr11:47176581|47176861 hsa-miR-4741 1 0 0
chr11:47176581|47176861 hsa-miR-5091 1 0 0
chr11:47176581|47176861 hsa-miR-5572 1 1 0
chr11:47176581|47176861 hsa-miR-5705 1 0 0
chr11:47176581|47176861 hsa-miR-5787 1 0 0
chr11:47176581|47176861 hsa-miR-6090 1 0 0
chr11:47176581|47176861 hsa-miR-6127 1 1 0
chr11:47176581|47176861 hsa-miR-6129 1 1 0
chr11:47176581|47176861 hsa-miR-6133 1 1 0
chr11:47176581|47176861 hsa-miR-6745 1 0 0
chr11:47176581|47176861 hsa-miR-7515 1 0 0
chr11:47176581|47176861 hsa-miR-8072 1 0 0
chr11:47176581|47176861 hsa-miR-8085 1 0 0
chr11:47176581|47176861 hsa-miR-8089 1 0 0
chr11:47176581|47176861 hsa-miR-9899 1 0 0
chr11:47176581|47176861 hsa-miR-1843 1 0 0
chr11:47176581|47176861 hsa-miR-12114 1 0 0
chr11:47176581|47176861 hsa-miR-12115 1 0 0
chr11:47176581|47176861 hsa-miR-12119 1 0 0
chr11:47176581|47176861 hsa-miR-128-1-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6734-5p 1 0 0
chr11:47176581|47176861 hsa-miR-500b-3p 0 1 0
chr11:47176581|47176861 hsa-miR-7155-5p 1 1 0
chr11:47176581|47176861 hsa-miR-6747-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6765-5p 1 0 0
chr11:47176581|47176861 hsa-miR-7106-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6825-5p 1 0 0
chr11:47176581|47176861 hsa-miR-210-5p 0 1 0
chr11:47176581|47176861 hsa-miR-25-5p 1 1 0
chr11:47176581|47176861 hsa-miR-6799-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6510-5p 0 1 0
chr11:47176581|47176861 hsa-miR-5187-5p 1 0 0
chr11:47176581|47176861 hsa-miR-1227-5p 1 1 0
chr11:47176581|47176861 hsa-miR-6089 1 0 0
chr11:47176581|47176861 hsa-miR-1225-3p 1 0 0
chr11:47176581|47176861 hsa-miR-6880-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6746-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6730-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6820-5p 1 0 0
chr11:47176581|47176861 hsa-miR-197-5p 1 0 0
chr11:47176581|47176861 hsa-miR-3180-3p 1 0 0
chr11:47176581|47176861 hsa-miR-6748-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6772-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6793-5p 1 1 0
chr11:47176581|47176861 hsa-miR-6796-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6732-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6805-5p 1 1 0
chr11:47176581|47176861 hsa-miR-6798-5p 1 1 0
chr11:47176581|47176861 hsa-miR-6760-5p 1 1 0
chr11:47176581|47176861 hsa-miR-6782-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6882-3p 1 1 0
chr11:47176581|47176861 hsa-miR-6786-5p 1 0 0
chr11:47176581|47176861 hsa-miR-5001-3p 1 0 0
chr11:47176581|47176861 hsa-miR-885-3p 1 0 0
chr11:47176581|47176861 hsa-miR-1908-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6749-5p 1 1 0
chr11:47176581|47176861 hsa-miR-3202 1 0 0
chr11:47176581|47176861 hsa-miR-6834-5p 0 1 0
chr11:47176581|47176861 hsa-miR-4787-5p 1 0 0
chr11:47176581|47176861 hsa-miR-149-3p 1 1 0
chr11:47176581|47176861 hsa-miR-6824-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6789-5p 1 0 0
chr11:47176581|47176861 hsa-miR-3162-5p 0 1 0
chr11:47176581|47176861 hsa-miR-6802-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6781-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6869-5p 1 1 0
chr11:47176581|47176861 hsa-miR-423-5p 1 0 0
chr11:47176581|47176861 hsa-miR-654-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6785-3p 0 1 0
chr11:47176581|47176861 hsa-miR-584-3p 0 1 0
chr11:47176581|47176861 hsa-miR-6895-3p 0 1 0
chr11:47176581|47176861 hsa-miR-6770-3p 0 1 0
chr11:47176581|47176861 hsa-miR-548ao-3p 0 1 0
chr11:47176581|47176861 hsa-miR-4650-5p 0 1 0
chr11:47176581|47176861 hsa-miR-10400-5p 1 0 0
chr11:47176581|47176861 hsa-miR-1207-5p 1 0 0
chr11:47176581|47176861 hsa-miR-1233-5p 1 0 0
chr11:47176581|47176861 hsa-miR-4763-3p 1 0 0
chr11:47176581|47176861 hsa-miR-6769b-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6778-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6787-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6816-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6870-5p 1 0 0
chr11:47176581|47176861 hsa-miR-3180 1 0 0
chr11:47176581|47176861 hsa-miR-6737-5p 1 1 0
chr11:47176581|47176861 hsa-miR-6743-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6752-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6754-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6756-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6769a-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6803-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6813-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6815-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6819-5p 1 1 0
chr11:47176581|47176861 hsa-miR-6842-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6851-5p 1 0 0
chr11:47176581|47176861 hsa-miR-7107-5p 0 1 0
chr11:47176581|47176861 hsa-miR-7110-5p 1 0 0
chr11:47176581|47176861 hsa-miR-1249-5p 1 1 0
chr11:47176581|47176861 hsa-miR-6722-3p 1 1 0
chr11:47176581|47176861 hsa-miR-6751-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6779-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6780a-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6797-5p 1 1 0
chr11:47176581|47176861 hsa-miR-7111-5p 1 0 0
chr11:47176581|47176861 hsa-miR-4728-5p 1 1 0
chr11:47176581|47176861 hsa-miR-5196-5p 1 1 0
chr11:47176581|47176861 hsa-miR-10396a-5p 1 0 0
chr11:47176581|47176861 hsa-miR-10396b-5p 1 0 0
chr11:47176581|47176861 hsa-miR-1237-5p 1 1 0
chr11:47176581|47176861 hsa-miR-1909-3p 0 1 0
chr11:47176581|47176861 hsa-miR-328-5p 1 0 0
chr11:47176581|47176861 hsa-miR-4649-5p 1 0 0
chr11:47176581|47176861 hsa-miR-4701-3p 1 0 0
chr11:47176581|47176861 hsa-miR-4725-3p 1 0 0
chr11:47176581|47176861 hsa-miR-6729-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6735-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6795-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6846-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6848-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6883-5p 1 1 0
chr11:47176581|47176861 hsa-miR-4697-5p 0 1 0
chr11:47176581|47176861 hsa-miR-4723-5p 1 0 0
chr11:47176581|47176861 hsa-miR-10394-3p 0 1 0
chr11:47176581|47176861 hsa-miR-3085-5p 1 0 0
chr11:47176581|47176861 hsa-miR-3940-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6731-5p 1 0 0
chr11:47176581|47176861 hsa-miR-1271-3p 0 1 0
chr11:47176581|47176861 hsa-miR-6855-5p 1 0 0
chr11:47176581|47176861 hsa-miR-6891-5p 1 0 0
chr11:47176581|47176861 hsa-miR-541-3p 1 0 0
chr11:47176581|47176861 hsa-miR-6785-5p 1 0 0
chr11:47176581|47176861 hsa-miR-3184-5p 1 0 0
chr11:47176581|47176861 hsa-miR-3689d 1 0 0
chr11:47176581|47176861 hsa-miR-6791-5p 1 0 0
chr11:47176581|47176861 hsa-miR-550a-3-5p 1 0 0
chr11:47176581|47176861 hsa-miR-550a-5p 1 1 0
chr11:47176581|47176861 hsa-miR-10401-3p 1 0 0
chr11:47176581|47176861 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:47176581|47176861
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MLTHLVGWNCAKPLKKSLDFGLVRLRRHFL
Nucleotide Sequence CTGCTCACGCACCTTGTTGGTTGGAACTGCGCGAAGCCTCTTAAAAAGAGTCTGGATTTCGGTCTTGTTCGGCTCCGCCGCCATTTTCTC
CircID chr11:47176581|47176861
ORF Type ORF2
Protein Length 90
Nucleotide Length 270
Protein Sequence MLAQLGFLAPQSKQAWVEAAMSESSGAPSKGQAPTPQKHNPPPPFSLPQAPAGRETPRAPCSRTLLVGTARSLLKRVWISVLFGSAAIFS
Nucleotide Sequence ATGCTGGCCCAACTCGGATTCTTGGCGCCGCAGTCGAAACAGGCCTGGGTGGAGGCGGCGATGAGCGAATCGTCAGGGGCCCCGAGTAAAGGCCAGGCACCGACACCCCAGAAACATAACCCACCTCCGCCCTTCTCCCTCCCTCAGGCCCCAGCGGGACGAGAGACTCCGCGCGCCCCCTGCTCACGCACCTTGTTGGTTGGAACTGCGCGAAGCCTCTTAAAAAGAGTCTGGATTTCGGTCTTGTTCGGCTCCGCCGCCATTTTCTCT
CircID chr11:47176581|47176861
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MGPEGGRRAEVGYVSGVSVPGLYSGPLTIRSSPPPPRPVSTAAPRIRVGPASRT
Nucleotide Sequence CTGGGGCCTGAGGGAGGGAGAAGGGCGGAGGTGGGTTATGTTTCTGGGGTGTCGGTGCCTGGCCTTTACTCGGGGCCCCTGACGATTCGCTCATCGCCGCCTCCACCCAGGCCTGTTTCGACTGCGGCGCCAAGAATCCGAGTTGGGCCAGCATCACGTACG
CircID chr11:47176581|47176861
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MAAEPNKTEIQTLFKRLRAVPTNKVREQGARGVSRPAGA
Nucleotide Sequence ATGGCGGCGGAGCCGAACAAGACCGAAATCCAGACTCTTTTTAAGAGGCTTCGCGCAGTTCCAACCAACAAGGTGCGTGAGCAGGGGGCGCGCGGAGTCTCTCGTCCCGCTGGGGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab