CircRNA Information

General Information
circRNA Basic Information
CircID chr11:47243054|47243292
Strand +
CircType exon
Host Gene ENSG00000134575.8;
Algorism CIRI2;
Sequence CTGACCCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACTCTGCGGTGAGTGCCTGCGCTCCCTAGCGTGCTGTGTCAGGCAAGGAGCTGGATTTCTTCTCTGTTCGGTTCCTGCGGGTGTGGGGAACAATGCTGACGGGCAGCCCCTCTCCCCCGCAGCACGACACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:47243054|47243292 hsa-miR-197-5p 0 0 1
chr11:47243054|47243292 hsa-miR-197-3p 0 0 1
chr11:47243054|47243292 hsa-miR-634 0 0 1
chr11:47243054|47243292 hsa-miR-646 0 0 1
chr11:47243054|47243292 hsa-miR-744-5p 0 0 1
chr11:47243054|47243292 hsa-miR-744-3p 0 0 1
chr11:47243054|47243292 hsa-miR-873-5p 0 0 1
chr11:47243054|47243292 hsa-miR-873-3p 0 0 1
chr11:47243054|47243292 hsa-miR-920 0 1 1
chr11:47243054|47243292 hsa-miR-939-5p 0 0 1
chr11:47243054|47243292 hsa-miR-939-3p 0 0 1
chr11:47243054|47243292 hsa-miR-1182 0 0 1
chr11:47243054|47243292 hsa-miR-1253 0 1 1
chr11:47243054|47243292 hsa-miR-1321 0 0 1
chr11:47243054|47243292 hsa-miR-1825 0 0 1
chr11:47243054|47243292 hsa-miR-199a-5p 0 0 1
chr11:47243054|47243292 hsa-miR-423-5p 0 0 1
chr11:47243054|47243292 hsa-miR-502-5p 0 0 1
chr11:47243054|47243292 hsa-miR-199b-5p 0 0 1
chr11:47243054|47243292 hsa-miR-142-3p 0 0 1
chr11:47243054|47243292 hsa-miR-323-5p 0 0 1
chr11:47243054|47243292 hsa-miR-1201 0 0 1
chr11:47243054|47243292 hsa-miR-638 1 0 0
chr11:47243054|47243292 hsa-miR-663a 1 0 0
chr11:47243054|47243292 hsa-miR-3147 1 0 0
chr11:47243054|47243292 hsa-miR-4300 0 1 0
chr11:47243054|47243292 hsa-miR-4269 0 1 0
chr11:47243054|47243292 hsa-miR-4278 1 1 0
chr11:47243054|47243292 hsa-miR-3689c 0 1 0
chr11:47243054|47243292 hsa-miR-4488 1 0 0
chr11:47243054|47243292 hsa-miR-4526 1 0 0
chr11:47243054|47243292 hsa-miR-4538 0 1 0
chr11:47243054|47243292 hsa-miR-4706 1 0 0
chr11:47243054|47243292 hsa-miR-5698 1 1 0
chr11:47243054|47243292 hsa-miR-6132 1 0 0
chr11:47243054|47243292 hsa-miR-8073 1 0 0
chr11:47243054|47243292 hsa-miR-8085 0 1 0
chr11:47243054|47243292 hsa-miR-9899 1 0 0
chr11:47243054|47243292 hsa-miR-4433b-3p 1 0 0
chr11:47243054|47243292 hsa-miR-504-3p 1 0 0
chr11:47243054|47243292 hsa-miR-6825-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6799-5p 1 0 0
chr11:47243054|47243292 hsa-miR-3192-5p 0 1 0
chr11:47243054|47243292 hsa-miR-6727-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6806-5p 1 0 0
chr11:47243054|47243292 hsa-miR-770-5p 1 0 0
chr11:47243054|47243292 hsa-miR-1915-5p 0 1 0
chr11:47243054|47243292 hsa-miR-6742-5p 1 0 0
chr11:47243054|47243292 hsa-miR-185-3p 0 1 0
chr11:47243054|47243292 hsa-miR-6805-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6782-5p 1 0 0
chr11:47243054|47243292 hsa-miR-30b-3p 1 1 0
chr11:47243054|47243292 hsa-miR-6882-3p 1 0 0
chr11:47243054|47243292 hsa-miR-6786-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6753-5p 0 1 0
chr11:47243054|47243292 hsa-miR-6823-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6736-3p 0 1 0
chr11:47243054|47243292 hsa-miR-6824-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6789-5p 1 0 0
chr11:47243054|47243292 hsa-miR-135b-3p 1 0 0
chr11:47243054|47243292 hsa-let-7i-5p 1 0 0
chr11:47243054|47243292 hsa-miR-503-3p 1 0 0
chr11:47243054|47243292 hsa-miR-2277-5p 1 0 0
chr11:47243054|47243292 hsa-miR-1233-5p 1 0 0
chr11:47243054|47243292 hsa-miR-3689b-3p 0 1 0
chr11:47243054|47243292 hsa-miR-6778-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6787-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6870-5p 0 1 0
chr11:47243054|47243292 hsa-miR-6775-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6726-5p 0 1 0
chr11:47243054|47243292 hsa-miR-6752-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6756-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6803-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6813-5p 0 1 0
chr11:47243054|47243292 hsa-miR-6815-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6842-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6851-5p 1 1 0
chr11:47243054|47243292 hsa-miR-7110-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6722-3p 1 0 0
chr11:47243054|47243292 hsa-miR-6763-5p 0 1 0
chr11:47243054|47243292 hsa-miR-7111-5p 0 1 0
chr11:47243054|47243292 hsa-miR-10396a-5p 1 0 0
chr11:47243054|47243292 hsa-miR-10396b-5p 1 0 0
chr11:47243054|47243292 hsa-miR-1237-5p 1 0 0
chr11:47243054|47243292 hsa-miR-1909-3p 1 0 0
chr11:47243054|47243292 hsa-miR-328-5p 1 0 0
chr11:47243054|47243292 hsa-miR-3689a-3p 0 1 0
chr11:47243054|47243292 hsa-miR-4632-5p 1 1 0
chr11:47243054|47243292 hsa-miR-4649-5p 1 0 0
chr11:47243054|47243292 hsa-miR-4685-5p 1 0 0
chr11:47243054|47243292 hsa-miR-4745-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6846-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6848-5p 1 1 0
chr11:47243054|47243292 hsa-miR-4697-5p 1 1 0
chr11:47243054|47243292 hsa-miR-6885-5p 1 0 0
chr11:47243054|47243292 hsa-miR-6511b-5p 1 0 0
chr11:47243054|47243292 hsa-miR-3085-5p 1 1 0
chr11:47243054|47243292 hsa-miR-1914-3p 1 0 0
chr11:47243054|47243292 hsa-miR-6855-5p 1 0 0
chr11:47243054|47243292 hsa-miR-324-3p 1 0 0
chr11:47243054|47243292 hsa-miR-4472 1 0 0
chr11:47243054|47243292 hsa-miR-4756-5p 1 0 0
chr11:47243054|47243292 hsa-miR-33b-3p 1 0 0
chr11:47243054|47243292 hsa-miR-3914 0 1 0
chr11:47243054|47243292 hsa-miR-99b-5p 0 1 0
chr11:47243054|47243292 hsa-miR-100-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:47243054|47243292
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MDFFSVRFLRVWGTMLTGSPSPPQHDTTLVALQMALDVYNGEQAPYA
Nucleotide Sequence CTGGATTTCTTCTCTGTTCGGTTCCTGCGGGTGTGGGGAACAATGCTGACGGGCAGCCCCTCTCCCCCGCAGCACGACACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCC

CircID chr11:47243054|47243292
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MRSLACCVRQGAGFLLCSVPAGVGNNADGQPLSPAARHYPGCPANGTGCLQW
Nucleotide Sequence CTGCGCTCCCTAGCGTGCTGTGTCAGGCAAGGAGCTGGATTTCTTCTCTGTTCGGTTCCTGCGGGTGTGGGGAACAATGCTGACGGGCAGCCCCTCTCCCCCGCAGCACGACACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGA

CircID chr11:47243054|47243292
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MPVSIVPHTRRNRTEKKSSSLPDTAR
Nucleotide Sequence CTGCCCGTCAGCATTGTTCCCCACACCCGCAGGAACCGAACAGAGAAGAAATCCAGCTCCTTGCCTGACACAGCACGCTAG

CircID chr11:47243054|47243292
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MFPTPAGTEQRRNPAPCLTQHARERRHSPQSKPAAWGAGRWSPLGS
Nucleotide Sequence TTGTTCCCCACACCCGCAGGAACCGAACAGAGAAGAAATCCAGCTCCTTGCCTGACACAGCACGCTAGGGAGCGCAGGCACTCACCGCAGAGTAAACCAGCAGCTTGGGGAGCTGGGAGGTGGTCGCCATTAGGGTCA

CircID chr11:47243054|47243292
ORF Type ORF5
Protein Length 46
Nucleotide Length 141
Protein Sequence MFTIVDIQCHLQGNQGSVVLRGRGAARQHCSPHPQEPNREEIQLLA
Nucleotide Sequence TTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCAGGGTAGTGTCGTGCTGCGGGGGAGAGGGGCTGCCCGTCAGCATTGTTCCCCACACCCGCAGGAACCGAACAGAGAAGAAATCCAGCTCCTTGCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites