CircRNA Information

General Information
circRNA Basic Information
CircID chr11:47357086|47357323
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence ATGCTAACACCTCACACATTCACACCCACTCACATGCTCACACCTCACACATGCTCACACCTCATACCTCACACACATGCTCACATCTCACACCCACTCACACACACCTGCCCACACATATCTGCACACACACATGCTCACACATATGCTCACACATCACACATACCTGCTCACATACATGCTCACACCTCACAGCTGCTCACTTATCACTCACACGCTCACACCAGCTCTTTCACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:47357086|47357323 hsa-let-7b-5p 0 0 1
chr11:47357086|47357323 hsa-let-7b-3p 0 0 1
chr11:47357086|47357323 hsa-let-7c-5p 0 0 1
chr11:47357086|47357323 hsa-let-7c-3p 0 0 1
chr11:47357086|47357323 hsa-let-7d-5p 0 0 1
chr11:47357086|47357323 hsa-let-7d-3p 0 0 1
chr11:47357086|47357323 hsa-let-7e-5p 0 0 1
chr11:47357086|47357323 hsa-let-7e-3p 0 0 1
chr11:47357086|47357323 hsa-miR-98-5p 0 0 1
chr11:47357086|47357323 hsa-miR-98-3p 0 0 1
chr11:47357086|47357323 hsa-let-7g-5p 0 0 1
chr11:47357086|47357323 hsa-let-7g-3p 0 0 1
chr11:47357086|47357323 hsa-let-7i-5p 0 0 1
chr11:47357086|47357323 hsa-let-7i-3p 0 0 1
chr11:47357086|47357323 hsa-miR-143-5p 0 0 1
chr11:47357086|47357323 hsa-miR-143-3p 0 0 1
chr11:47357086|47357323 hsa-miR-202-5p 0 0 1
chr11:47357086|47357323 hsa-miR-202-3p 0 0 1
chr11:47357086|47357323 hsa-miR-567 0 0 1
chr11:47357086|47357323 hsa-miR-609 0 0 1
chr11:47357086|47357323 hsa-miR-646 1 0 1
chr11:47357086|47357323 hsa-miR-190b-5p 0 0 1
chr11:47357086|47357323 hsa-miR-190b-3p 0 0 1
chr11:47357086|47357323 hsa-miR-297 1 1 1
chr11:47357086|47357323 hsa-miR-1294 1 1 1
chr11:47357086|47357323 hsa-miR-1257 0 0 1
chr11:47357086|47357323 hsa-miR-1276 0 0 1
chr11:47357086|47357323 hsa-miR-576-3p 0 0 1
chr11:47357086|47357323 hsa-miR-644 0 0 1
chr11:47357086|47357323 hsa-miR-138 0 0 1
chr11:47357086|47357323 hsa-let-7a 0 0 1
chr11:47357086|47357323 hsa-let-7f 0 0 1
chr11:47357086|47357323 hsa-miR-147 0 0 1
chr11:47357086|47357323 hsa-miR-190 0 0 1
chr11:47357086|47357323 hsa-miR-571 1 0 0
chr11:47357086|47357323 hsa-miR-595 1 0 0
chr11:47357086|47357323 hsa-miR-608 1 0 0
chr11:47357086|47357323 hsa-miR-612 1 0 0
chr11:47357086|47357323 hsa-miR-648 1 0 0
chr11:47357086|47357323 hsa-miR-762 1 0 0
chr11:47357086|47357323 hsa-miR-1265 1 0 0
chr11:47357086|47357323 hsa-miR-1268a 1 0 0
chr11:47357086|47357323 hsa-miR-2278 0 1 0
chr11:47357086|47357323 hsa-miR-3138 1 0 0
chr11:47357086|47357323 hsa-miR-3141 1 0 0
chr11:47357086|47357323 hsa-miR-3149 0 1 0
chr11:47357086|47357323 hsa-miR-4316 1 0 0
chr11:47357086|47357323 hsa-miR-4322 1 0 0
chr11:47357086|47357323 hsa-miR-4253 1 0 0
chr11:47357086|47357323 hsa-miR-4265 1 0 0
chr11:47357086|47357323 hsa-miR-3650 1 1 0
chr11:47357086|47357323 hsa-miR-3652 1 0 0
chr11:47357086|47357323 hsa-miR-3665 1 0 0
chr11:47357086|47357323 hsa-miR-3911 1 0 0
chr11:47357086|47357323 hsa-miR-3936 1 0 0
chr11:47357086|47357323 hsa-miR-1268b 1 0 0
chr11:47357086|47357323 hsa-miR-4429 1 0 0
chr11:47357086|47357323 hsa-miR-4430 1 0 0
chr11:47357086|47357323 hsa-miR-4455 1 1 0
chr11:47357086|47357323 hsa-miR-4466 1 0 0
chr11:47357086|47357323 hsa-miR-3689c 1 1 0
chr11:47357086|47357323 hsa-miR-4481 1 1 0
chr11:47357086|47357323 hsa-miR-4487 1 0 0
chr11:47357086|47357323 hsa-miR-4491 1 0 0
chr11:47357086|47357323 hsa-miR-4492 1 0 0
chr11:47357086|47357323 hsa-miR-4498 1 0 0
chr11:47357086|47357323 hsa-miR-4506 1 0 0
chr11:47357086|47357323 hsa-miR-4507 1 0 0
chr11:47357086|47357323 hsa-miR-4525 1 0 0
chr11:47357086|47357323 hsa-miR-1587 1 0 0
chr11:47357086|47357323 hsa-miR-4651 1 0 0
chr11:47357086|47357323 hsa-miR-4654 1 0 0
chr11:47357086|47357323 hsa-miR-4658 1 0 0
chr11:47357086|47357323 hsa-miR-4660 1 0 0
chr11:47357086|47357323 hsa-miR-4669 1 0 0
chr11:47357086|47357323 hsa-miR-4675 1 0 0
chr11:47357086|47357323 hsa-miR-4710 1 0 0
chr11:47357086|47357323 hsa-miR-4736 1 0 0
chr11:47357086|47357323 hsa-miR-4765 1 1 0
chr11:47357086|47357323 hsa-miR-5787 1 0 0
chr11:47357086|47357323 hsa-miR-6077 1 0 0
chr11:47357086|47357323 hsa-miR-6085 1 0 0
chr11:47357086|47357323 hsa-miR-6088 1 0 0
chr11:47357086|47357323 hsa-miR-6134 1 0 0
chr11:47357086|47357323 hsa-miR-6860 1 1 0
chr11:47357086|47357323 hsa-miR-7974 1 0 0
chr11:47357086|47357323 hsa-miR-7978 0 1 0
chr11:47357086|47357323 hsa-miR-8055 1 0 0
chr11:47357086|47357323 hsa-miR-9986 1 1 0
chr11:47357086|47357323 hsa-miR-10226 1 1 0
chr11:47357086|47357323 hsa-miR-138-5p 1 1 0
chr11:47357086|47357323 hsa-miR-122-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6747-5p 1 0 0
chr11:47357086|47357323 hsa-miR-4433a-3p 1 0 0
chr11:47357086|47357323 hsa-miR-210-3p 1 0 0
chr11:47357086|47357323 hsa-miR-6861-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6825-5p 1 0 0
chr11:47357086|47357323 hsa-miR-4687-3p 1 0 0
chr11:47357086|47357323 hsa-miR-125a-3p 1 0 0
chr11:47357086|47357323 hsa-miR-6799-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6804-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6833-5p 1 0 0
chr11:47357086|47357323 hsa-miR-5187-5p 1 0 0
chr11:47357086|47357323 hsa-miR-3934-5p 1 0 0
chr11:47357086|47357323 hsa-miR-3192-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6867-5p 1 1 0
chr11:47357086|47357323 hsa-miR-6730-5p 1 0 0
chr11:47357086|47357323 hsa-miR-1301-3p 1 0 0
chr11:47357086|47357323 hsa-miR-6890-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6741-5p 1 0 0
chr11:47357086|47357323 hsa-miR-3622b-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6806-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6759-5p 1 1 0
chr11:47357086|47357323 hsa-miR-6721-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6742-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6871-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6748-5p 1 1 0
chr11:47357086|47357323 hsa-miR-6772-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6793-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6796-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6829-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6835-5p 1 0 0
chr11:47357086|47357323 hsa-miR-1226-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6853-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6740-5p 1 0 0
chr11:47357086|47357323 hsa-miR-1229-5p 1 0 0
chr11:47357086|47357323 hsa-miR-885-3p 1 0 0
chr11:47357086|47357323 hsa-miR-4764-5p 0 1 0
chr11:47357086|47357323 hsa-miR-1228-5p 1 0 0
chr11:47357086|47357323 hsa-miR-7854-3p 1 0 0
chr11:47357086|47357323 hsa-miR-4446-3p 1 0 0
chr11:47357086|47357323 hsa-miR-3616-3p 1 0 0
chr11:47357086|47357323 hsa-miR-6800-5p 1 0 0
chr11:47357086|47357323 hsa-miR-5010-5p 1 0 0
chr11:47357086|47357323 hsa-miR-7162-3p 1 0 0
chr11:47357086|47357323 hsa-miR-574-5p 1 1 0
chr11:47357086|47357323 hsa-miR-7112-5p 1 0 0
chr11:47357086|47357323 hsa-miR-1225-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6818-5p 1 1 0
chr11:47357086|47357323 hsa-miR-4766-5p 1 0 0
chr11:47357086|47357323 hsa-miR-1207-5p 1 0 0
chr11:47357086|47357323 hsa-miR-1233-5p 1 0 0
chr11:47357086|47357323 hsa-miR-3689b-3p 1 1 0
chr11:47357086|47357323 hsa-miR-4763-3p 1 0 0
chr11:47357086|47357323 hsa-miR-6769b-5p 1 1 0
chr11:47357086|47357323 hsa-miR-6778-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6787-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6812-5p 1 1 0
chr11:47357086|47357323 hsa-miR-6816-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6893-5p 1 0 0
chr11:47357086|47357323 hsa-miR-5001-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6726-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6737-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6752-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6756-5p 1 1 0
chr11:47357086|47357323 hsa-miR-6769a-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6803-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6819-5p 1 0 0
chr11:47357086|47357323 hsa-miR-7110-5p 1 0 0
chr11:47357086|47357323 hsa-miR-10401-5p 1 1 0
chr11:47357086|47357323 hsa-miR-6722-3p 1 0 0
chr11:47357086|47357323 hsa-miR-6751-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6763-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6779-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6879-5p 1 0 0
chr11:47357086|47357323 hsa-miR-3620-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6862-5p 1 0 0
chr11:47357086|47357323 hsa-miR-1237-5p 1 0 0
chr11:47357086|47357323 hsa-miR-3689a-3p 1 0 0
chr11:47357086|47357323 hsa-miR-4632-5p 1 0 0
chr11:47357086|47357323 hsa-miR-4701-3p 1 1 0
chr11:47357086|47357323 hsa-miR-4745-5p 1 1 0
chr11:47357086|47357323 hsa-miR-6738-5p 1 0 0
chr11:47357086|47357323 hsa-miR-675-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6883-5p 1 0 0
chr11:47357086|47357323 hsa-miR-3187-5p 1 1 0
chr11:47357086|47357323 hsa-miR-4436b-3p 1 0 0
chr11:47357086|47357323 hsa-miR-939-5p 1 0 0
chr11:47357086|47357323 hsa-miR-1238-5p 1 1 0
chr11:47357086|47357323 hsa-miR-4758-5p 1 1 0
chr11:47357086|47357323 hsa-miR-4769-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6511b-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6736-5p 1 0 0
chr11:47357086|47357323 hsa-miR-6855-5p 1 0 0
chr11:47357086|47357323 hsa-miR-3679-5p 1 0 0
chr11:47357086|47357323 hsa-miR-4472 1 0 0
chr11:47357086|47357323 hsa-miR-6766-5p 1 0 0
chr11:47357086|47357323 hsa-miR-3689d 1 0 0
chr11:47357086|47357323 hsa-miR-6790-5p 1 0 0
chr11:47357086|47357323 hsa-miR-320a-3p 1 0 0
chr11:47357086|47357323 hsa-miR-320b 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:47357086|47357323
ORF Type ORF1
Protein Length 79
Nucleotide Length 237
Protein Sequence MLTPHTFTPTHMLTPHTCSHLIPHTHAHISHPLTHTCPHISAHTHAHTYAHTSHIPAHIHAHTSQLLTYHSHAHTSSFT
Nucleotide Sequence ATGCTAACACCTCACACATTCACACCCACTCACATGCTCACACCTCACACATGCTCACACCTCATACCTCACACACATGCTCACATCTCACACCCACTCACACACACCTGCCCACACATATCTGCACACACACATGCTCACACATATGCTCACACATCACACATACCTGCTCACATACATGCTCACACCTCACAGCTGCTCACTTATCACTCACACGCTCACACCAGCTCTTTCACA
CircID chr11:47357086|47357323
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence MLTSHTHSHTPAHTYLHTHMLTHMLTHHTYLLTYMLTPHSCSLITHTLTPALSH
Nucleotide Sequence ATGCTCACATCTCACACCCACTCACACACACCTGCCCACACATATCTGCACACACACATGCTCACACATATGCTCACACATCACACATACCTGCTCACATACATGCTCACACCTCACAGCTGCTCACTTATCACTCACACGCTCACACCAGCTCTTTCACAC
CircID chr11:47357086|47357323
ORF Type ORF3
Protein Length 62
Nucleotide Length 186
Protein Sequence MLTPHTSHTCSHLTPTHTHLPTHICTHTCSHICSHITHTCSHTCSHLTAAHLSLTRSHQLFH
Nucleotide Sequence ATGCTCACACCTCATACCTCACACACATGCTCACATCTCACACCCACTCACACACACCTGCCCACACATATCTGCACACACACATGCTCACACATATGCTCACACATCACACATACCTGCTCACATACATGCTCACACCTCACAGCTGCTCACTTATCACTCACACGCTCACACCAGCTCTTTCAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab