CircNet

General Information

circRNA Basic Information

CircID	chr11:47724468\|47751290
Strand	-
CircType	exon
Host Gene	ENSG00000109920.12;
Algorism	find_circ;CIRI2;CIRC
Sequence	TCGGAATTGAGATGGGCGATTGGCAGGAAGTCTGGGATGAGAACACGGGATGTTATTATTATTGGAATACACAAACAAATGAAGTGACTTGGGAGTTACCCCAATATCTTGCCACACAGGTACAGGGATTACAGCATTACCAGCCCAGTTCTGTGCCAGGTGCTGAAACTAGTTTTGTGGTAAATACAGACATATATTCTAAGGAGAAAACGATTTCTGTTTCCAGTAGTAAAAGTGGACCAGTCATAGCCAAGCGAGAAGTTAAAAAGGTTCTCTTTGTAAAGAATCCTTTTCTGGTCAAGTTTCTTCTTCATCACTCATGCCACTTACTCCATTCTGGACCCTCCTTCAGTCAAATGTTCCTGTGCTTCAACCTCCATTACCCTTGGAAATGCCACCACCCCCACCTCCACCTCCAGAATCACCTCCACCCCCTCCTCCACCACCTCCTCCTGCGGAAGATGGTGAGATCCAGGAGGTAGAGATGGAGGATGAGGGAAGTGAGGAGCCCCCTGCCCCAGGAACAGAGGAAGATACCCCTTTGAAACCTTCAGCACAAACCACAGTTGTAACTAGCCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr11:47724468\|47751290	hsa-miR-602	1	1	1
chr11:47724468\|47751290	hsa-miR-1470	1	1	1
chr11:47724468\|47751290	hsa-miR-4313	1	1	1
chr11:47724468\|47751290	hsa-miR-2392	1	1	1
chr11:47724468\|47751290	hsa-miR-4736	1	1	1
chr11:47724468\|47751290	hsa-miR-5093	1	1	1
chr11:47724468\|47751290	hsa-miR-5193	1	1	1
chr11:47724468\|47751290	hsa-miR-7150	1	1	1
chr11:47724468\|47751290	hsa-miR-8053	1	1	1
chr11:47724468\|47751290	hsa-miR-197-3p	1	1	1
chr11:47724468\|47751290	hsa-miR-136-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-6728-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-5187-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-3934-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-6757-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-8069	1	1	1
chr11:47724468\|47751290	hsa-miR-218-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-1273f	1	1	1
chr11:47724468\|47751290	hsa-miR-1224-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-1228-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-4667-3p	1	1	1
chr11:47724468\|47751290	hsa-miR-6717-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-1306-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-30a-3p	1	1	1
chr11:47724468\|47751290	hsa-miR-4776-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-6889-3p	1	1	1
chr11:47724468\|47751290	hsa-miR-4758-3p	1	1	1
chr11:47724468\|47751290	hsa-miR-6887-3p	1	1	1
chr11:47724468\|47751290	hsa-miR-1224-3p	1	1	1
chr11:47724468\|47751290	hsa-miR-509-3p	1	1	1
chr11:47724468\|47751290	hsa-miR-1914-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-1227-3p	1	1	1
chr11:47724468\|47751290	hsa-miR-7152-5p	1	1	1
chr11:47724468\|47751290	hsa-miR-30d-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr11:47724468\|47751290
ORF Type	ORF1
Protein Length	157
Nucleotide Length	471
Protein Sequence	MGDWQEVWDENTGCYYYWNTQTNEVTWELPQYLATQVQGLQHYQPSSVPGAETSFVVNTDIYSKEKTISVSSSKSGPVIAKREVKKVLFVKNPFLVKFLLHHSCHLLHSGPSFSQMFLCFNLHYPWKCHHPHLHLQNHLHPLLHHLLLRKMVRSRR*
Nucleotide Sequence	ATGGGCGATTGGCAGGAAGTCTGGGATGAGAACACGGGATGTTATTATTATTGGAATACACAAACAAATGAAGTGACTTGGGAGTTACCCCAATATCTTGCCACACAGGTACAGGGATTACAGCATTACCAGCCCAGTTCTGTGCCAGGTGCTGAAACTAGTTTTGTGGTAAATACAGACATATATTCTAAGGAGAAAACGATTTCTGTTTCCAGTAGTAAAAGTGGACCAGTCATAGCCAAGCGAGAAGTTAAAAAGGTTCTCTTTGTAAAGAATCCTTTTCTGGTCAAGTTTCTTCTTCATCACTCATGCCACTTACTCCATTCTGGACCCTCCTTCAGTCAAATGTTCCTGTGCTTCAACCTCCATTACCCTTGGAAATGCCACCACCCCCACCTCCACCTCCAGAATCACCTCCACCCCCTCCTCCACCACCTCCTCCTGCGGAAGATGGTGAGATCCAGGAGGTAG

CircID	chr11:47724468\|47751290
ORF Type	ORF2
Protein Length	87
Nucleotide Length	261
Protein Sequence	MPLTPFWTLLQSNVPVLQPPLPLEMPPPPPPPPESPPPPPPPPPPAEDGEIQEVEMEDEGSEEPPAPGTEEDTPLKPSAQTTVVTSQ
Nucleotide Sequence	ATGCCACTTACTCCATTCTGGACCCTCCTTCAGTCAAATGTTCCTGTGCTTCAACCTCCATTACCCTTGGAAATGCCACCACCCCCACCTCCACCTCCAGAATCACCTCCACCCCCTCCTCCACCACCTCCTCCTGCGGAAGATGGTGAGATCCAGGAGGTAGAGATGGAGGATGAGGGAAGTGAGGAGCCCCCTGCCCCAGGAACAGAGGAAGATACCCCTTTGAAACCTTCAGCACAAACCACAGTTGTAACTAGCCAG

CircID	chr11:47724468\|47751290
ORF Type	ORF3
Protein Length	62
Nucleotide Length	186
Protein Sequence	MKKKLDQKRILYKENLFNFSLGYDWSTFTTGNRNRFLLRIYVCIYHKTSFSTWHRTGLVML*
Nucleotide Sequence	ATGAAGAAGAAACTTGACCAGAAAAGGATTCTTTACAAAGAGAACCTTTTTAACTTCTCGCTTGGCTATGACTGGTCCACTTTTACTACTGGAAACAGAAATCGTTTTCTCCTTAGAATATATGTCTGTATTTACCACAAAACTAGTTTCAGCACCTGGCACAGAACTGGGCTGGTAATGCTGTAA

CircID	chr11:47724468\|47751290
ORF Type	ORF4
Protein Length	37
Nucleotide Length	111
Protein Sequence	MTGPLLLLETEIVFSLEYMSVFTTKLVSAPGTELGW*
Nucleotide Sequence	ATGACTGGTCCACTTTTACTACTGGAAACAGAAATCGTTTTCTCCTTAGAATATATGTCTGTATTTACCACAAAACTAGTTTCAGCACCTGGCACAGAACTGGGCTGGTAA

CircID	chr11:47724468\|47751290
ORF Type	ORF5
Protein Length	77
Nucleotide Length	231
Protein Sequence	VLKVSKGYLPLFLGQGAPHFPHPPSLPPGSHHLPQEEVVEEGVEVILEVEVGVVAFPRVMEVEAQEHLTEGGSRME*
Nucleotide Sequence	GTGCTGAAGGTTTCAAAGGGGTATCTTCCTCTGTTCCTGGGGCAGGGGGCTCCTCACTTCCCTCATCCTCCATCTCTACCTCCTGGATCTCACCATCTTCCGCAGGAGGAGGTGGTGGAGGAGGGGGTGGAGGTGATTCTGGAGGTGGAGGTGGGGGTGGTGGCATTTCCAAGGGTAATGGAGGTTGAAGCACAGGAACATTTGACTGAAGGAGGGTCCAGAATGGAGTAA

CircID	chr11:47724468\|47751290
ORF Type	ORF6
Protein Length	65
Nucleotide Length	195
Protein Sequence	VVCAEGFKGVSSSVPGAGGSSLPSSSISTSWISPSSAGGGGGGGGGGDSGGGGGGGGISKGNGG*
Nucleotide Sequence	GTGGTTTGTGCTGAAGGTTTCAAAGGGGTATCTTCCTCTGTTCCTGGGGCAGGGGGCTCCTCACTTCCCTCATCCTCCATCTCTACCTCCTGGATCTCACCATCTTCCGCAGGAGGAGGTGGTGGAGGAGGGGGTGGAGGTGATTCTGGAGGTGGAGGTGGGGGTGGTGGCATTTCCAAGGGTAATGGAGGTTGA

CircID	chr11:47724468\|47751290
ORF Type	ORF7
Protein Length	62
Nucleotide Length	186
Protein Sequence	RILFWSSFFFITHATYSILDPPSVKCSCASTSITLGNATTPTSTSRITSTPSSTTSSCGRW*
Nucleotide Sequence	AGAATCCTTTTCTGGTCAAGTTTCTTCTTCATCACTCATGCCACTTACTCCATTCTGGACCCTCCTTCAGTCAAATGTTCCTGTGCTTCAACCTCCATTACCCTTGGAAATGCCACCACCCCCACCTCCACCTCCAGAATCACCTCCACCCCCTCCTCCACCACCTCCTCCTGCGGAAGATGGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr11:47724468\|47751290	UCHL5	0	0	7
chr11:47724468\|47751290	U2AF2	6	18	13
chr11:47724468\|47751290	MOV10	0	2	0
chr11:47724468\|47751290	ELAVL1	3	3	3
chr11:47724468\|47751290	PRPF8	0	6	0
chr11:47724468\|47751290	SF3B4	1	2	3
chr11:47724468\|47751290	FAM120A	1	1	1
chr11:47724468\|47751290	CELF2	1	0	0
chr11:47724468\|47751290	CNBP	0	0	1
chr11:47724468\|47751290	UPF1	0	2	1
chr11:47724468\|47751290	DDX54	1	6	12
chr11:47724468\|47751290	TNRC6A	0	0	1
chr11:47724468\|47751290	FMR1	0	3	7
chr11:47724468\|47751290	CPSF6	0	0	2
chr11:47724468\|47751290	NUDT21	0	0	1
chr11:47724468\|47751290	VIM	0	0	1
chr11:47724468\|47751290	RBM15B	0	1	0
chr11:47724468\|47751290	EIF3H	0	0	1
chr11:47724468\|47751290	DGCR8	0	1	1
chr11:47724468\|47751290	SRSF7	0	0	3
chr11:47724468\|47751290	IGF2BP2	0	2	10
chr11:47724468\|47751290	SRSF1	0	2	9
chr11:47724468\|47751290	NOP58	2	3	5
chr11:47724468\|47751290	RBM27	0	1	0
chr11:47724468\|47751290	U2AF1	1	2	5
chr11:47724468\|47751290	NOP56	2	1	2
chr11:47724468\|47751290	SRSF9	0	1	3
chr11:47724468\|47751290	ZNF622	0	0	3
chr11:47724468\|47751290	LSM11	0	2	0
chr11:47724468\|47751290	YTHDF2	0	1	0
chr11:47724468\|47751290	GRWD1	0	0	2
chr11:47724468\|47751290	HNRNPK	0	0	2
chr11:47724468\|47751290	PCBP2	0	0	2
chr11:47724468\|47751290	HNRNPM	0	2	0
chr11:47724468\|47751290	RBM15	0	0	3
chr11:47724468\|47751290	SF3A3	1	2	0
chr11:47724468\|47751290	FIP1L1	0	1	0
chr11:47724468\|47751290	PTBP1	1	2	0
chr11:47724468\|47751290	HNRNPC	12	21	1
chr11:47724468\|47751290	TRA2A	1	2	12
chr11:47724468\|47751290	NOL12	0	0	1
chr11:47724468\|47751290	NONO	1	0	0
chr11:47724468\|47751290	ZNF184	0	3	0
chr11:47724468\|47751290	HNRNPA1	2	2	0
chr11:47724468\|47751290	XRN2	0	2	0
chr11:47724468\|47751290	SMNDC1	2	5	4
chr11:47724468\|47751290	RBM10	0	6	1
chr11:47724468\|47751290	ACIN1	0	6	3
chr11:47724468\|47751290	LIN28B	2	6	5
chr11:47724468\|47751290	RANGAP1	0	0	2
chr11:47724468\|47751290	FXR1	1	0	2
chr11:47724468\|47751290	BCCIP	0	0	2
chr11:47724468\|47751290	RBM22	0	5	0
chr11:47724468\|47751290	IGF2BP1	0	1	6
chr11:47724468\|47751290	BUD13	0	3	1
chr11:47724468\|47751290	IGF2BP3	0	1	4
chr11:47724468\|47751290	MTPAP	0	0	3
chr11:47724468\|47751290	AUH	0	1	0
chr11:47724468\|47751290	TARDBP	0	3	1
chr11:47724468\|47751290	YTHDC1	0	2	1
chr11:47724468\|47751290	TAF15	0	1	0
chr11:47724468\|47751290	FBL	0	0	6
chr11:47724468\|47751290	DICER1	0	0	1
chr11:47724468\|47751290	RBFOX2	2	0	2
chr11:47724468\|47751290	DDX24	0	0	3
chr11:47724468\|47751290	EIF4G2	0	0	2
chr11:47724468\|47751290	DDX42	1	0	0
chr11:47724468\|47751290	CSTF2T	1	2	4
chr11:47724468\|47751290	FXR2	2	0	1
chr11:47724468\|47751290	CSTF2	1	0	1
chr11:47724468\|47751290	CPSF7	0	0	2
chr11:47724468\|47751290	KHSRP	1	0	0
chr11:47724468\|47751290	METTL3	0	1	0
chr11:47724468\|47751290	TIAL1	0	1	0
chr11:47724468\|47751290	TIA1	0	1	0
chr11:47724468\|47751290	AIFM1	0	0	2
chr11:47724468\|47751290	ATXN2	0	1	0
chr11:47724468\|47751290	EWSR1	0	1	0
chr11:47724468\|47751290	EIF4A3	5	4	11
chr11:47724468\|47751290	AGO2	0	2	4

CircRNA Information