CircRNA Information

General Information
circRNA Basic Information
CircID chr11:57308891|57309108
Strand -
CircType exon
Host Gene ENSG00000149115.12;
Algorism CIRI2;
Sequence GCTCCCTTGATTTAAGGAACTCTCCGGCCTCCACACCTGACCAGTCAGTCTGCCCCACGCCACTCTCTCTGGCCTGGCTGTGGCCTCCTCCCTCCCCGACCTCAGCCAAATCTTTGCTCTTCACATTAACATCAGAAGTCCAGTCCTTCTCCCCAACTCCGATTCCCCCCGGCTCTTCAGACCCTCCACTTTCCAAACAGCCGGTCAGGTTCATGTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:57308891|57309108 hsa-miR-422a 0 0 1
chr11:57308891|57309108 hsa-miR-569 0 0 1
chr11:57308891|57309108 hsa-miR-571 0 0 1
chr11:57308891|57309108 hsa-miR-625-5p 0 0 1
chr11:57308891|57309108 hsa-miR-625-3p 0 0 1
chr11:57308891|57309108 hsa-miR-647 0 0 1
chr11:57308891|57309108 hsa-miR-650 0 0 1
chr11:57308891|57309108 hsa-miR-765 0 0 1
chr11:57308891|57309108 hsa-miR-939-5p 0 0 1
chr11:57308891|57309108 hsa-miR-939-3p 0 0 1
chr11:57308891|57309108 hsa-miR-1182 0 0 1
chr11:57308891|57309108 hsa-miR-1321 0 0 1
chr11:57308891|57309108 hsa-miR-125a-3p 1 0 1
chr11:57308891|57309108 hsa-miR-486-3p 1 0 1
chr11:57308891|57309108 hsa-miR-542-5p 0 0 1
chr11:57308891|57309108 hsa-miR-378 0 0 1
chr11:57308891|57309108 hsa-miR-638 1 0 0
chr11:57308891|57309108 hsa-miR-658 1 0 0
chr11:57308891|57309108 hsa-miR-762 1 0 0
chr11:57308891|57309108 hsa-miR-1268a 1 0 0
chr11:57308891|57309108 hsa-miR-1275 1 0 0
chr11:57308891|57309108 hsa-miR-3131 1 0 0
chr11:57308891|57309108 hsa-miR-378b 1 0 0
chr11:57308891|57309108 hsa-miR-3138 1 0 0
chr11:57308891|57309108 hsa-miR-3141 1 0 0
chr11:57308891|57309108 hsa-miR-3147 1 0 0
chr11:57308891|57309108 hsa-miR-3196 1 0 0
chr11:57308891|57309108 hsa-miR-378c 1 0 0
chr11:57308891|57309108 hsa-miR-4298 1 0 0
chr11:57308891|57309108 hsa-miR-4271 1 0 0
chr11:57308891|57309108 hsa-miR-3652 1 0 0
chr11:57308891|57309108 hsa-miR-1268b 1 0 0
chr11:57308891|57309108 hsa-miR-4430 1 0 0
chr11:57308891|57309108 hsa-miR-4440 1 0 0
chr11:57308891|57309108 hsa-miR-378h 1 0 0
chr11:57308891|57309108 hsa-miR-4463 1 0 0
chr11:57308891|57309108 hsa-miR-4478 1 0 0
chr11:57308891|57309108 hsa-miR-4488 1 0 0
chr11:57308891|57309108 hsa-miR-4498 1 0 0
chr11:57308891|57309108 hsa-miR-4505 1 0 0
chr11:57308891|57309108 hsa-miR-2392 1 0 0
chr11:57308891|57309108 hsa-miR-4507 1 0 0
chr11:57308891|57309108 hsa-miR-4513 1 0 0
chr11:57308891|57309108 hsa-miR-4515 1 0 0
chr11:57308891|57309108 hsa-miR-4516 1 0 0
chr11:57308891|57309108 hsa-miR-4531 1 0 0
chr11:57308891|57309108 hsa-miR-1587 1 0 0
chr11:57308891|57309108 hsa-miR-4651 1 0 0
chr11:57308891|57309108 hsa-miR-4656 1 0 0
chr11:57308891|57309108 hsa-miR-4688 1 0 0
chr11:57308891|57309108 hsa-miR-4689 1 0 0
chr11:57308891|57309108 hsa-miR-4706 1 0 0
chr11:57308891|57309108 hsa-miR-4730 1 0 0
chr11:57308891|57309108 hsa-miR-4739 1 0 0
chr11:57308891|57309108 hsa-miR-5090 1 0 0
chr11:57308891|57309108 hsa-miR-5192 1 0 0
chr11:57308891|57309108 hsa-miR-5739 1 0 0
chr11:57308891|57309108 hsa-miR-5787 1 0 0
chr11:57308891|57309108 hsa-miR-6086 1 0 0
chr11:57308891|57309108 hsa-miR-6090 1 0 0
chr11:57308891|57309108 hsa-miR-6127 1 0 0
chr11:57308891|57309108 hsa-miR-6131 1 0 0
chr11:57308891|57309108 hsa-miR-6133 1 0 0
chr11:57308891|57309108 hsa-miR-6745 1 0 0
chr11:57308891|57309108 hsa-miR-8085 1 0 0
chr11:57308891|57309108 hsa-miR-8089 1 0 0
chr11:57308891|57309108 hsa-miR-12119 1 0 0
chr11:57308891|57309108 hsa-miR-12122 1 0 0
chr11:57308891|57309108 hsa-miR-4433b-3p 1 0 0
chr11:57308891|57309108 hsa-miR-4731-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6747-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4433a-3p 1 0 0
chr11:57308891|57309108 hsa-miR-6765-5p 1 0 0
chr11:57308891|57309108 hsa-miR-3150a-3p 1 0 0
chr11:57308891|57309108 hsa-miR-7106-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6825-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6894-5p 1 0 0
chr11:57308891|57309108 hsa-miR-1972 1 0 0
chr11:57308891|57309108 hsa-miR-4687-3p 1 0 0
chr11:57308891|57309108 hsa-miR-6510-5p 1 0 0
chr11:57308891|57309108 hsa-miR-8071 1 0 0
chr11:57308891|57309108 hsa-miR-766-5p 1 0 0
chr11:57308891|57309108 hsa-miR-3934-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6089 1 0 0
chr11:57308891|57309108 hsa-miR-6880-5p 1 0 0
chr11:57308891|57309108 hsa-miR-7847-3p 1 0 0
chr11:57308891|57309108 hsa-miR-6746-5p 1 0 0
chr11:57308891|57309108 hsa-miR-7160-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6727-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4474-3p 1 0 0
chr11:57308891|57309108 hsa-miR-3622b-5p 1 0 0
chr11:57308891|57309108 hsa-miR-197-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6742-5p 1 0 0
chr11:57308891|57309108 hsa-miR-3605-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6716-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6871-5p 1 0 0
chr11:57308891|57309108 hsa-miR-3151-5p 1 0 0
chr11:57308891|57309108 hsa-miR-659-3p 1 0 0
chr11:57308891|57309108 hsa-miR-3180-3p 1 0 0
chr11:57308891|57309108 hsa-miR-6796-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6798-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6760-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6881-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6782-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6810-5p 1 0 0
chr11:57308891|57309108 hsa-miR-3934-3p 1 0 0
chr11:57308891|57309108 hsa-miR-6835-5p 1 0 0
chr11:57308891|57309108 hsa-miR-7109-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6853-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6740-5p 1 0 0
chr11:57308891|57309108 hsa-miR-1229-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6784-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4640-5p 1 0 0
chr11:57308891|57309108 hsa-miR-30c-2-3p 1 0 0
chr11:57308891|57309108 hsa-miR-296-3p 1 0 0
chr11:57308891|57309108 hsa-miR-6771-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4732-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6834-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4743-5p 1 0 0
chr11:57308891|57309108 hsa-miR-3648 1 0 0
chr11:57308891|57309108 hsa-miR-4787-5p 1 0 0
chr11:57308891|57309108 hsa-miR-149-3p 1 0 0
chr11:57308891|57309108 hsa-miR-6824-5p 1 0 0
chr11:57308891|57309108 hsa-miR-3162-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6781-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6878-5p 1 0 0
chr11:57308891|57309108 hsa-miR-5010-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4750-5p 1 0 0
chr11:57308891|57309108 hsa-miR-758-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4529-3p 1 0 0
chr11:57308891|57309108 hsa-miR-541-5p 1 0 0
chr11:57308891|57309108 hsa-miR-1207-5p 1 0 0
chr11:57308891|57309108 hsa-miR-1233-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4763-3p 1 0 0
chr11:57308891|57309108 hsa-miR-6787-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6812-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6816-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6870-5p 1 0 0
chr11:57308891|57309108 hsa-miR-1343-5p 1 0 0
chr11:57308891|57309108 hsa-miR-3180 1 0 0
chr11:57308891|57309108 hsa-miR-5001-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6743-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6752-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6754-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6756-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6815-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6819-5p 1 0 0
chr11:57308891|57309108 hsa-miR-7110-5p 1 0 0
chr11:57308891|57309108 hsa-miR-10401-5p 1 0 0
chr11:57308891|57309108 hsa-miR-11181-3p 1 0 0
chr11:57308891|57309108 hsa-miR-1249-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6722-3p 1 0 0
chr11:57308891|57309108 hsa-miR-6763-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6779-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6780a-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6788-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6797-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6879-5p 1 0 0
chr11:57308891|57309108 hsa-miR-7111-5p 1 0 0
chr11:57308891|57309108 hsa-miR-3620-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4728-5p 1 0 0
chr11:57308891|57309108 hsa-miR-5196-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6780b-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6862-5p 1 0 0
chr11:57308891|57309108 hsa-miR-1237-5p 1 0 0
chr11:57308891|57309108 hsa-miR-328-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4649-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4726-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4745-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6735-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6738-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6777-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6795-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6858-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6887-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6889-5p 1 0 0
chr11:57308891|57309108 hsa-miR-3940-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6731-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6758-5p 1 0 0
chr11:57308891|57309108 hsa-miR-6856-5p 1 0 0
chr11:57308891|57309108 hsa-miR-1914-3p 1 0 0
chr11:57308891|57309108 hsa-miR-10398-3p 1 0 0
chr11:57308891|57309108 hsa-miR-3173-3p 1 0 0
chr11:57308891|57309108 hsa-miR-4646-5p 1 0 0
chr11:57308891|57309108 hsa-miR-4747-5p 1 0 0
chr11:57308891|57309108 hsa-miR-378a-3p 1 0 0
chr11:57308891|57309108 hsa-miR-4716-3p 1 0 0
chr11:57308891|57309108 hsa-miR-6790-5p 1 0 0
chr11:57308891|57309108 hsa-miR-10400-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:57308891|57309108
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MTSQSAPRHSLWPGCGLLPPRPQPNLCSSH
Nucleotide Sequence CTGACCAGTCAGTCTGCCCCACGCCACTCTCTCTGGCCTGGCTGTGGCCTCCTCCCTCCCCGACCTCAGCCAAATCTTTGCTCTTCACATTAA
CircID chr11:57308891|57309108
ORF Type ORF2
Protein Length 56
Nucleotide Length 168
Protein Sequence MPHATLSGLAVASSLPDLSQIFALHINIRSPVLLPNSDSPRLFRPSTFQTAGQVHV
Nucleotide Sequence CTGCCCCACGCCACTCTCTCTGGCCTGGCTGTGGCCTCCTCCCTCCCCGACCTCAGCCAAATCTTTGCTCTTCACATTAACATCAGAAGTCCAGTCCTTCTCCCCAACTCCGATTCCCCCCGGCTCTTCAGACCCTCCACTTTCCAAACAGCCGGTCAGGTTCATGTC
CircID chr11:57308891|57309108
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MAWLWPPPSPTSAKSLLFTLTSEVQSFSPTPIPPGSSDPPLSKQPVRFMS
Nucleotide Sequence CTGGCCTGGCTGTGGCCTCCTCCCTCCCCGACCTCAGCCAAATCTTTGCTCTTCACATTAACATCAGAAGTCCAGTCCTTCTCCCCAACTCCGATTCCCCCCGGCTCTTCAGACCCTCCACTTTCCAAACAGCCGGTCAGGTTCATGTCT
CircID chr11:57308891|57309108
ORF Type ORF4
Protein Length 71
Nucleotide Length 213
Protein Sequence MNLTGCLESGGSEEPGGIGVGEKDWTSDVNVKSKDLAEVGEGGGHSQARESGVGQTDWSGVEAGEFLKSRE
Nucleotide Sequence ATGAACCTGACCGGCTGTTTGGAAAGTGGAGGGTCTGAAGAGCCGGGGGGAATCGGAGTTGGGGAGAAGGACTGGACTTCTGATGTTAATGTGAAGAGCAAAGATTTGGCTGAGGTCGGGGAGGGAGGAGGCCACAGCCAGGCCAGAGAGAGTGGCGTGGGGCAGACTGACTGGTCAGGTGTGGAGGCCGGAGAGTTCCTTAAATCAAGGGAG
CircID chr11:57308891|57309108
ORF Type ORF5
Protein Length 35
Nucleotide Length 105
Protein Sequence MRSGREEATARPERVAWGRLTGQVWRPESSLNQGS
Nucleotide Sequence CTGAGGTCGGGGAGGGAGGAGGCCACAGCCAGGCCAGAGAGAGTGGCGTGGGGCAGACTGACTGGTCAGGTGTGGAGGCCGGAGAGTTCCTTAAATCAAGGGAGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab