CircRNA Information

General Information
circRNA Basic Information
CircID chr11:57309961|57310080
Strand -
CircType exon
Host Gene ENSG00000149115.12;
Algorism CIRI2;
Sequence CTACCATGGTGGTCCCTCTTCCCCAAATCTTGGCCCTGCTCGTTGGCATCTTGGCTGGCATAAGCACCCAGAGAATCTCTCTTCCCAAATTCCCAGTCCCCAAGGCTTACATCTCGACTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:57309961|57310080 hsa-miR-326 0 0 1
chr11:57309961|57310080 hsa-miR-1202 1 0 1
chr11:57309961|57310080 hsa-miR-330-5p 0 0 1
chr11:57309961|57310080 hsa-miR-637 1 0 0
chr11:57309961|57310080 hsa-miR-762 1 0 0
chr11:57309961|57310080 hsa-miR-1286 1 0 0
chr11:57309961|57310080 hsa-miR-1275 1 0 0
chr11:57309961|57310080 hsa-miR-2110 1 0 0
chr11:57309961|57310080 hsa-miR-4270 1 0 0
chr11:57309961|57310080 hsa-miR-3918 1 0 0
chr11:57309961|57310080 hsa-miR-4450 1 0 0
chr11:57309961|57310080 hsa-miR-4505 1 0 0
chr11:57309961|57310080 hsa-miR-1587 1 0 0
chr11:57309961|57310080 hsa-miR-3972 1 0 0
chr11:57309961|57310080 hsa-miR-4739 1 0 0
chr11:57309961|57310080 hsa-miR-4748 1 0 0
chr11:57309961|57310080 hsa-miR-5572 1 0 0
chr11:57309961|57310080 hsa-miR-5787 1 0 0
chr11:57309961|57310080 hsa-miR-6088 1 0 0
chr11:57309961|57310080 hsa-miR-6132 1 0 0
chr11:57309961|57310080 hsa-miR-6165 1 0 0
chr11:57309961|57310080 hsa-miR-8085 1 0 0
chr11:57309961|57310080 hsa-miR-8089 1 0 0
chr11:57309961|57310080 hsa-miR-9500 1 0 0
chr11:57309961|57310080 hsa-miR-12126 1 0 0
chr11:57309961|57310080 hsa-miR-7106-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6825-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6857-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6510-5p 1 0 0
chr11:57309961|57310080 hsa-miR-5187-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6741-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6721-5p 1 0 0
chr11:57309961|57310080 hsa-miR-197-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6716-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6871-5p 1 0 0
chr11:57309961|57310080 hsa-miR-185-3p 1 0 0
chr11:57309961|57310080 hsa-miR-3194-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6810-5p 1 0 0
chr11:57309961|57310080 hsa-miR-5088-5p 1 0 0
chr11:57309961|57310080 hsa-miR-7109-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6740-5p 1 0 0
chr11:57309961|57310080 hsa-miR-4640-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6824-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6877-5p 1 0 0
chr11:57309961|57310080 hsa-miR-7112-5p 1 0 0
chr11:57309961|57310080 hsa-miR-664b-5p 1 0 0
chr11:57309961|57310080 hsa-miR-135b-3p 1 0 0
chr11:57309961|57310080 hsa-miR-3922-5p 1 0 0
chr11:57309961|57310080 hsa-miR-3191-3p 1 0 0
chr11:57309961|57310080 hsa-miR-744-5p 1 0 0
chr11:57309961|57310080 hsa-miR-1207-5p 1 0 0
chr11:57309961|57310080 hsa-miR-4763-3p 1 0 0
chr11:57309961|57310080 hsa-miR-6865-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6870-5p 1 0 0
chr11:57309961|57310080 hsa-miR-1343-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6726-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6743-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6803-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6813-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6819-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6722-3p 1 0 0
chr11:57309961|57310080 hsa-miR-6763-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6779-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6780a-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6808-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6879-5p 1 0 0
chr11:57309961|57310080 hsa-miR-7111-5p 1 0 0
chr11:57309961|57310080 hsa-miR-3620-5p 1 0 0
chr11:57309961|57310080 hsa-miR-5196-5p 1 0 0
chr11:57309961|57310080 hsa-miR-10396a-5p 1 0 0
chr11:57309961|57310080 hsa-miR-1909-3p 1 0 0
chr11:57309961|57310080 hsa-miR-4726-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6846-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6848-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6858-5p 1 0 0
chr11:57309961|57310080 hsa-miR-365a-5p 1 0 0
chr11:57309961|57310080 hsa-miR-3085-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6731-5p 1 0 0
chr11:57309961|57310080 hsa-miR-4646-5p 1 0 0
chr11:57309961|57310080 hsa-miR-4747-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6791-5p 1 0 0
chr11:57309961|57310080 hsa-miR-6837-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:57309961|57310080
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MVVPLPQILALLVGILAGISTQRISLPKFPVPKAYIST
Nucleotide Sequence ATGGTGGTCCCTCTTCCCCAAATCTTGGCCCTGCTCGTTGGCATCTTGGCTGGCATAAGCACCCAGAGAATCTCTCTTCCCAAATTCCCAGTCCCCAAGGCTTACATCTCGACT
CircID chr11:57309961|57310080
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MGIWEERFSGCLCQPRCQRAGPRFGEEGPPW
Nucleotide Sequence CTGGGAATTTGGGAAGAGAGATTCTCTGGGTGCTTATGCCAGCCAAGATGCCAACGAGCAGGGCCAAGATTTGGGGAAGAGGGACCACCATGGTAG
CircID chr11:57309961|57310080
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MGTGNLGREILWVLMPAKMPTSRAKIWGRGTTMV
Nucleotide Sequence TTGGGGACTGGGAATTTGGGAAGAGAGATTCTCTGGGTGCTTATGCCAGCCAAGATGCCAACGAGCAGGGCCAAGATTTGGGGAAGAGGGACCACCATGGTA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab