CircRNA Information

General Information
circRNA Basic Information
CircID chr11:57320249|57320465
Strand +
CircType exon
Host Gene ENSG00000149115.12;
Algorism CIRI2;
Sequence CCAAGAGACTGGGAAAGAGGAGGCTGGGAAAGAGGAGCCACCCCCTTTGACACCCCCAGCTCGATGTGCAGCCCCAGGGGGTGTACGGAAGGCCCCTGCCCCTTTCCGCCCAGCCTCAGAGCGCTTCGCGGCCACCACGGTGGAAGAGATCCTGGCCAAGATGGAGCAGCCTCGGAAGGAGGTCCTTGCCAGCCCCGACCGCCTGTGGGGTTCCCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:57320249|57320465 hsa-miR-31-5p 0 0 1
chr11:57320249|57320465 hsa-miR-31-3p 0 0 1
chr11:57320249|57320465 hsa-miR-518e-5p 0 0 1
chr11:57320249|57320465 hsa-miR-518e-3p 0 0 1
chr11:57320249|57320465 hsa-miR-588 0 0 1
chr11:57320249|57320465 hsa-miR-608 1 0 1
chr11:57320249|57320465 hsa-miR-637 0 0 1
chr11:57320249|57320465 hsa-miR-1236-5p 0 0 1
chr11:57320249|57320465 hsa-miR-1236-3p 0 0 1
chr11:57320249|57320465 hsa-miR-486-3p 0 0 1
chr11:57320249|57320465 hsa-miR-485-5p 0 1 1
chr11:57320249|57320465 hsa-miR-331-3p 0 1 1
chr11:57320249|57320465 hsa-miR-1207-5p 0 0 1
chr11:57320249|57320465 hsa-miR-611 0 1 0
chr11:57320249|57320465 hsa-miR-661 1 0 0
chr11:57320249|57320465 hsa-miR-663a 1 0 0
chr11:57320249|57320465 hsa-miR-762 1 1 0
chr11:57320249|57320465 hsa-miR-663b 1 0 0
chr11:57320249|57320465 hsa-miR-3188 1 0 0
chr11:57320249|57320465 hsa-miR-3197 1 1 0
chr11:57320249|57320465 hsa-miR-4268 0 1 0
chr11:57320249|57320465 hsa-miR-4498 1 1 0
chr11:57320249|57320465 hsa-miR-4505 0 1 0
chr11:57320249|57320465 hsa-miR-4508 0 1 0
chr11:57320249|57320465 hsa-miR-1587 1 0 0
chr11:57320249|57320465 hsa-miR-4656 1 0 0
chr11:57320249|57320465 hsa-miR-4741 1 0 0
chr11:57320249|57320465 hsa-miR-5193 0 1 0
chr11:57320249|57320465 hsa-miR-5787 0 1 0
chr11:57320249|57320465 hsa-miR-6086 1 0 0
chr11:57320249|57320465 hsa-miR-7706 1 1 0
chr11:57320249|57320465 hsa-miR-9901 1 0 0
chr11:57320249|57320465 hsa-miR-12119 0 1 0
chr11:57320249|57320465 hsa-miR-4731-5p 0 1 0
chr11:57320249|57320465 hsa-miR-323a-5p 1 1 0
chr11:57320249|57320465 hsa-miR-6747-5p 0 1 0
chr11:57320249|57320465 hsa-miR-6765-5p 1 0 0
chr11:57320249|57320465 hsa-miR-671-5p 1 0 0
chr11:57320249|57320465 hsa-miR-6881-3p 0 1 0
chr11:57320249|57320465 hsa-miR-6089 1 0 0
chr11:57320249|57320465 hsa-miR-6762-3p 1 1 0
chr11:57320249|57320465 hsa-miR-6727-5p 1 1 0
chr11:57320249|57320465 hsa-miR-4474-3p 1 0 0
chr11:57320249|57320465 hsa-miR-3187-3p 1 0 0
chr11:57320249|57320465 hsa-miR-6721-5p 0 1 0
chr11:57320249|57320465 hsa-miR-7108-5p 1 0 0
chr11:57320249|57320465 hsa-miR-185-3p 1 1 0
chr11:57320249|57320465 hsa-miR-6829-5p 1 0 0
chr11:57320249|57320465 hsa-miR-6732-5p 0 1 0
chr11:57320249|57320465 hsa-miR-4753-3p 0 1 0
chr11:57320249|57320465 hsa-miR-4793-3p 1 0 0
chr11:57320249|57320465 hsa-miR-6815-3p 0 1 0
chr11:57320249|57320465 hsa-miR-6763-3p 1 0 0
chr11:57320249|57320465 hsa-miR-3944-3p 1 0 0
chr11:57320249|57320465 hsa-miR-4640-5p 1 0 0
chr11:57320249|57320465 hsa-miR-1228-5p 0 1 0
chr11:57320249|57320465 hsa-miR-6823-5p 1 0 0
chr11:57320249|57320465 hsa-miR-3648 1 0 0
chr11:57320249|57320465 hsa-miR-4787-5p 1 0 0
chr11:57320249|57320465 hsa-miR-4446-3p 0 1 0
chr11:57320249|57320465 hsa-miR-130b-5p 0 1 0
chr11:57320249|57320465 hsa-miR-3678-5p 0 1 0
chr11:57320249|57320465 hsa-miR-4763-3p 1 1 0
chr11:57320249|57320465 hsa-miR-6775-5p 1 0 0
chr11:57320249|57320465 hsa-miR-5001-5p 1 1 0
chr11:57320249|57320465 hsa-miR-6743-5p 0 1 0
chr11:57320249|57320465 hsa-miR-6752-5p 1 1 0
chr11:57320249|57320465 hsa-miR-6756-5p 1 0 0
chr11:57320249|57320465 hsa-miR-6803-5p 1 1 0
chr11:57320249|57320465 hsa-miR-6813-5p 1 0 0
chr11:57320249|57320465 hsa-miR-6842-5p 1 1 0
chr11:57320249|57320465 hsa-miR-7110-5p 0 1 0
chr11:57320249|57320465 hsa-miR-6751-5p 0 1 0
chr11:57320249|57320465 hsa-miR-320a-5p 0 1 0
chr11:57320249|57320465 hsa-miR-3620-5p 1 0 0
chr11:57320249|57320465 hsa-miR-5196-5p 1 0 0
chr11:57320249|57320465 hsa-miR-10392-5p 1 0 0
chr11:57320249|57320465 hsa-miR-1909-3p 0 1 0
chr11:57320249|57320465 hsa-miR-6846-5p 1 0 0
chr11:57320249|57320465 hsa-miR-6848-5p 1 1 0
chr11:57320249|57320465 hsa-miR-6791-3p 0 1 0
chr11:57320249|57320465 hsa-miR-6791-5p 1 1 0
chr11:57320249|57320465 hsa-miR-6829-3p 0 1 0
chr11:57320249|57320465 hsa-miR-6751-3p 1 0 0
chr11:57320249|57320465 hsa-miR-6781-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:57320249|57320465
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MCSPRGCTEGPCPFPPSLRALRGHHGGRDPGQDGAASEGGPCQPRPPVGFP
Nucleotide Sequence ATGTGCAGCCCCAGGGGGTGTACGGAAGGCCCCTGCCCCTTTCCGCCCAGCCTCAGAGCGCTTCGCGGCCACCACGGTGGAAGAGATCCTGGCCAAGATGGAGCAGCCTCGGAAGGAGGTCCTTGCCAGCCCCGACCGCCTGTGGGGTTCCCG

CircID chr11:57320249|57320465
ORF Type ORF2
Protein Length 57
Nucleotide Length 171
Protein Sequence MTPPARCAAPGGVRKAPAPFRPASERFAATTVEEILAKMEQPRKEVLASPDRLWGSR
Nucleotide Sequence TTGACACCCCCAGCTCGATGTGCAGCCCCAGGGGGTGTACGGAAGGCCCCTGCCCCTTTCCGCCCAGCCTCAGAGCGCTTCGCGGCCACCACGGTGGAAGAGATCCTGGCCAAGATGGAGCAGCCTCGGAAGGAGGTCCTTGCCAGCCCCGACCGCCTGTGGGGTTCCCGC

CircID chr11:57320249|57320465
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MPLSAQPQSASRPPRWKRSWPRWSSLGRRSLPAPTACGVP
Nucleotide Sequence CTGCCCCTTTCCGCCCAGCCTCAGAGCGCTTCGCGGCCACCACGGTGGAAGAGATCCTGGCCAAGATGGAGCAGCCTCGGAAGGAGGTCCTTGCCAGCCCCGACCGCCTGTGGGGTTCCC

CircID chr11:57320249|57320465
ORF Type ORF4
Protein Length 64
Nucleotide Length 192
Protein Sequence MARTSFRGCSILARISSTVVAAKRSEAGRKGAGAFRTPPGAAHRAGGVKGGGSSFPASSFPVSW
Nucleotide Sequence CTGGCAAGGACCTCCTTCCGAGGCTGCTCCATCTTGGCCAGGATCTCTTCCACCGTGGTGGCCGCGAAGCGCTCTGAGGCTGGGCGGAAAGGGGCAGGGGCCTTCCGTACACCCCCTGGGGCTGCACATCGAGCTGGGGGTGTCAAAGGGGGTGGCTCCTCTTTCCCAGCCTCCTCTTTCCCAGTCTCTTGG

CircID chr11:57320249|57320465
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MRLGGKGQGPSVHPLGLHIELGVSKGVAPLSQPPLSQSL
Nucleotide Sequence CTGAGGCTGGGCGGAAAGGGGCAGGGGCCTTCCGTACACCCCCTGGGGCTGCACATCGAGCTGGGGGTGTCAAAGGGGGTGGCTCCTCTTTCCCAGCCTCCTCTTTCCCAGTCTCTT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites