CircRNA Information

General Information
circRNA Basic Information
CircID chr11:57467865|57468084
Strand -
CircType exon
Host Gene ENSG00000186907.6;
Algorism CIRI2;
Sequence CATCTACCCGGGCACTTTCCGCCACTTGCAAGCCCTGGAGGAGCTGGACCTCGGTGACAACCGGCACCTGCGCTCGCTGGAGCCCGACACCTTCCAGGGCCTGGAGCGGCTGCAGTCGCTGCATTTGTACCGCTGCCAGCTCAGCAGCCTGCCCGGCAACATCTTCCGAGGCCTGGTCAGCCTGCAGTACCTCTACCTCCAGGAGAACAGCCTGCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:57467865|57468084 hsa-let-7b-5p 0 0 1
chr11:57467865|57468084 hsa-let-7b-3p 0 0 1
chr11:57467865|57468084 hsa-let-7c-5p 0 0 1
chr11:57467865|57468084 hsa-let-7c-3p 0 0 1
chr11:57467865|57468084 hsa-let-7d-5p 0 0 1
chr11:57467865|57468084 hsa-let-7d-3p 0 0 1
chr11:57467865|57468084 hsa-let-7e-5p 0 0 1
chr11:57467865|57468084 hsa-let-7e-3p 0 0 1
chr11:57467865|57468084 hsa-miR-17-5p 0 0 1
chr11:57467865|57468084 hsa-miR-17-3p 0 0 1
chr11:57467865|57468084 hsa-miR-20a-5p 0 0 1
chr11:57467865|57468084 hsa-miR-20a-3p 0 0 1
chr11:57467865|57468084 hsa-miR-93-5p 0 0 1
chr11:57467865|57468084 hsa-miR-93-3p 0 0 1
chr11:57467865|57468084 hsa-miR-98-5p 0 0 1
chr11:57467865|57468084 hsa-miR-98-3p 0 0 1
chr11:57467865|57468084 hsa-miR-106a-5p 0 0 1
chr11:57467865|57468084 hsa-miR-106a-3p 0 0 1
chr11:57467865|57468084 hsa-miR-217-5p 0 0 1
chr11:57467865|57468084 hsa-miR-217-3p 0 0 1
chr11:57467865|57468084 hsa-let-7g-5p 0 0 1
chr11:57467865|57468084 hsa-let-7g-3p 0 0 1
chr11:57467865|57468084 hsa-let-7i-5p 0 0 1
chr11:57467865|57468084 hsa-let-7i-3p 0 0 1
chr11:57467865|57468084 hsa-miR-106b-5p 0 0 1
chr11:57467865|57468084 hsa-miR-106b-3p 0 0 1
chr11:57467865|57468084 hsa-miR-20b-5p 0 0 1
chr11:57467865|57468084 hsa-miR-20b-3p 0 0 1
chr11:57467865|57468084 hsa-miR-519d-5p 0 0 1
chr11:57467865|57468084 hsa-miR-519d-3p 0 0 1
chr11:57467865|57468084 hsa-miR-558 0 0 1
chr11:57467865|57468084 hsa-miR-766-5p 0 0 1
chr11:57467865|57468084 hsa-miR-766-3p 0 0 1
chr11:57467865|57468084 hsa-miR-1205 0 0 1
chr11:57467865|57468084 hsa-miR-1291 0 0 1
chr11:57467865|57468084 hsa-miR-885-3p 1 1 1
chr11:57467865|57468084 hsa-miR-1184 0 1 1
chr11:57467865|57468084 hsa-miR-509-3-5p 0 1 1
chr11:57467865|57468084 hsa-miR-509-5p 0 0 1
chr11:57467865|57468084 hsa-miR-105 0 0 1
chr11:57467865|57468084 hsa-let-7a 0 0 1
chr11:57467865|57468084 hsa-let-7f 0 0 1
chr11:57467865|57468084 hsa-miR-453 0 0 1
chr11:57467865|57468084 hsa-miR-612 1 1 0
chr11:57467865|57468084 hsa-miR-637 1 0 0
chr11:57467865|57468084 hsa-miR-762 1 0 0
chr11:57467865|57468084 hsa-miR-764 0 1 0
chr11:57467865|57468084 hsa-miR-3147 1 0 0
chr11:57467865|57468084 hsa-miR-4298 1 0 0
chr11:57467865|57468084 hsa-miR-4327 0 1 0
chr11:57467865|57468084 hsa-miR-3665 1 1 0
chr11:57467865|57468084 hsa-miR-3907 1 0 0
chr11:57467865|57468084 hsa-miR-4418 0 1 0
chr11:57467865|57468084 hsa-miR-4494 1 0 0
chr11:57467865|57468084 hsa-miR-4498 1 1 0
chr11:57467865|57468084 hsa-miR-4505 1 0 0
chr11:57467865|57468084 hsa-miR-4663 1 1 0
chr11:57467865|57468084 hsa-miR-4688 1 0 0
chr11:57467865|57468084 hsa-miR-4734 1 0 0
chr11:57467865|57468084 hsa-miR-4741 1 0 0
chr11:57467865|57468084 hsa-miR-5090 1 0 0
chr11:57467865|57468084 hsa-miR-6081 1 0 0
chr11:57467865|57468084 hsa-miR-6860 0 1 0
chr11:57467865|57468084 hsa-miR-7974 1 0 0
chr11:57467865|57468084 hsa-miR-105-5p 0 1 0
chr11:57467865|57468084 hsa-miR-6894-5p 1 0 0
chr11:57467865|57468084 hsa-miR-4687-3p 1 1 0
chr11:57467865|57468084 hsa-miR-6510-5p 1 0 0
chr11:57467865|57468084 hsa-miR-3692-5p 0 1 0
chr11:57467865|57468084 hsa-miR-4722-5p 1 0 0
chr11:57467865|57468084 hsa-miR-4755-3p 0 1 0
chr11:57467865|57468084 hsa-miR-6721-5p 0 1 0
chr11:57467865|57468084 hsa-miR-185-3p 1 0 0
chr11:57467865|57468084 hsa-miR-6829-5p 1 0 0
chr11:57467865|57468084 hsa-miR-6874-5p 1 0 0
chr11:57467865|57468084 hsa-miR-5008-5p 1 0 0
chr11:57467865|57468084 hsa-miR-1909-5p 1 0 0
chr11:57467865|57468084 hsa-miR-3944-3p 1 0 0
chr11:57467865|57468084 hsa-miR-6771-5p 1 0 0
chr11:57467865|57468084 hsa-miR-4690-5p 1 1 0
chr11:57467865|57468084 hsa-miR-6736-3p 0 1 0
chr11:57467865|57468084 hsa-miR-7156-3p 0 1 0
chr11:57467865|57468084 hsa-miR-4684-3p 0 1 0
chr11:57467865|57468084 hsa-miR-516b-5p 0 1 0
chr11:57467865|57468084 hsa-miR-7112-5p 0 1 0
chr11:57467865|57468084 hsa-miR-4707-5p 1 0 0
chr11:57467865|57468084 hsa-miR-6743-3p 0 1 0
chr11:57467865|57468084 hsa-let-7a-5p 0 1 0
chr11:57467865|57468084 hsa-miR-2277-5p 1 0 0
chr11:57467865|57468084 hsa-miR-10400-5p 1 0 0
chr11:57467865|57468084 hsa-miR-4763-3p 1 0 0
chr11:57467865|57468084 hsa-miR-6775-5p 1 0 0
chr11:57467865|57468084 hsa-miR-5001-5p 1 0 0
chr11:57467865|57468084 hsa-miR-6743-5p 1 0 0
chr11:57467865|57468084 hsa-miR-6803-5p 1 1 0
chr11:57467865|57468084 hsa-miR-6815-5p 1 0 0
chr11:57467865|57468084 hsa-miR-6851-5p 1 0 0
chr11:57467865|57468084 hsa-miR-11181-3p 1 0 0
chr11:57467865|57468084 hsa-miR-7111-5p 1 0 0
chr11:57467865|57468084 hsa-miR-3620-5p 1 0 0
chr11:57467865|57468084 hsa-miR-1909-3p 1 0 0
chr11:57467865|57468084 hsa-miR-449c-5p 1 0 0
chr11:57467865|57468084 hsa-miR-4685-5p 1 1 0
chr11:57467865|57468084 hsa-miR-4745-5p 1 0 0
chr11:57467865|57468084 hsa-miR-6846-5p 1 0 0
chr11:57467865|57468084 hsa-miR-6831-5p 0 1 0
chr11:57467865|57468084 hsa-miR-6511b-5p 0 1 0
chr11:57467865|57468084 hsa-miR-3085-5p 1 0 0
chr11:57467865|57468084 hsa-miR-5008-3p 1 0 0
chr11:57467865|57468084 hsa-miR-6791-5p 1 0 0
chr11:57467865|57468084 hsa-miR-9851-5p 0 1 0
chr11:57467865|57468084 hsa-miR-10400-3p 1 0 0
chr11:57467865|57468084 hsa-miR-6837-5p 0 1 0
chr11:57467865|57468084 hsa-miR-4691-5p 0 1 0
chr11:57467865|57468084 hsa-miR-323b-5p 0 1 0
chr11:57467865|57468084 hsa-miR-3619-5p 1 0 0
chr11:57467865|57468084 hsa-miR-1301-5p 0 1 0
chr11:57467865|57468084 hsa-miR-494-5p 0 1 0
chr11:57467865|57468084 hsa-miR-3927-3p 0 1 0
chr11:57467865|57468084 hsa-miR-7853-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:57467865|57468084
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MPAQQPARQHLPRPGQPAVPLPPGEQPAP
Nucleotide Sequence CTGCCAGCTCAGCAGCCTGCCCGGCAACATCTTCCGAGGCCTGGTCAGCCTGCAGTACCTCTACCTCCAGGAGAACAGCCTGCTCCA
CircID chr11:57467865|57468084
ORF Type ORF2
Protein Length 65
Nucleotide Length 195
Protein Sequence MQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLH
Nucleotide Sequence TTGCAAGCCCTGGAGGAGCTGGACCTCGGTGACAACCGGCACCTGCGCTCGCTGGAGCCCGACACCTTCCAGGGCCTGGAGCGGCTGCAGTCGCTGCATTTGTACCGCTGCCAGCTCAGCAGCCTGCCCGGCAACATCTTCCGAGGCCTGGTCAGCCTGCAGTACCTCTACCTCCAGGAGAACAGCCTGCTCCAC
CircID chr11:57467865|57468084
ORF Type ORF3
Protein Length 67
Nucleotide Length 201
Protein Sequence MEVEVLQADQASEDVAGQAAELAAVQMQRLQPLQALEGVGLQRAQVPVVTEVQLLQGLQVAESARVD
Nucleotide Sequence CTGGAGGTAGAGGTACTGCAGGCTGACCAGGCCTCGGAAGATGTTGCCGGGCAGGCTGCTGAGCTGGCAGCGGTACAAATGCAGCGACTGCAGCCGCTCCAGGCCCTGGAAGGTGTCGGGCTCCAGCGAGCGCAGGTGCCGGTTGTCACCGAGGTCCAGCTCCTCCAGGGCTTGCAAGTGGCGGAAAGTGCCCGGGTAGAT
CircID chr11:57467865|57468084
ORF Type ORF4
Protein Length 58
Nucleotide Length 177
Protein Sequence MTRPRKMLPGRLLSWQRYKCSDCSRSRPWKVSGSSERRCRLSPRSSSSRACKWRKVPG
Nucleotide Sequence CTGACCAGGCCTCGGAAGATGTTGCCGGGCAGGCTGCTGAGCTGGCAGCGGTACAAATGCAGCGACTGCAGCCGCTCCAGGCCCTGGAAGGTGTCGGGCTCCAGCGAGCGCAGGTGCCGGTTGTCACCGAGGTCCAGCTCCTCCAGGGCTTGCAAGTGGCGGAAAGTGCCCGGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab