CircRNA Information

General Information
circRNA Basic Information
CircID chr11:57818119|57818249
Strand -
CircType exon
Host Gene ENSG00000198561.11;
Algorism CIRI2;
Sequence TGCACAGGGAAAATTGCCCCATCCAGACCTGGCTCCACTCTTGATCTCTCTTGTCCTCTTCTGCTCTTTTCCTGGTGCTCTTTTTTCTCGGTGGGGTGTGGGTAATAGAACAGCCGTGGGCTTTTGGGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:57818119|57818249 hsa-miR-29a-5p 0 0 1
chr11:57818119|57818249 hsa-miR-29a-3p 0 0 1
chr11:57818119|57818249 hsa-miR-29c-5p 0 0 1
chr11:57818119|57818249 hsa-miR-29c-3p 0 0 1
chr11:57818119|57818249 hsa-miR-335-5p 0 0 1
chr11:57818119|57818249 hsa-miR-335-3p 0 0 1
chr11:57818119|57818249 hsa-miR-298 1 0 1
chr11:57818119|57818249 hsa-miR-1276 0 1 1
chr11:57818119|57818249 hsa-miR-486-3p 0 0 1
chr11:57818119|57818249 hsa-miR-339-5p 0 0 1
chr11:57818119|57818249 hsa-miR-556-3p 0 1 1
chr11:57818119|57818249 hsa-miR-1274a 0 0 1
chr11:57818119|57818249 hsa-miR-1280 0 0 1
chr11:57818119|57818249 hsa-miR-1274b 0 0 1
chr11:57818119|57818249 hsa-miR-29b 0 0 1
chr11:57818119|57818249 hsa-miR-198 1 0 0
chr11:57818119|57818249 hsa-miR-2278 1 0 0
chr11:57818119|57818249 hsa-miR-3153 0 1 0
chr11:57818119|57818249 hsa-miR-3154 1 0 0
chr11:57818119|57818249 hsa-miR-4468 1 1 0
chr11:57818119|57818249 hsa-miR-4654 1 0 0
chr11:57818119|57818249 hsa-miR-4739 1 0 0
chr11:57818119|57818249 hsa-miR-5192 1 0 0
chr11:57818119|57818249 hsa-miR-6081 1 0 0
chr11:57818119|57818249 hsa-miR-6088 1 0 0
chr11:57818119|57818249 hsa-miR-6124 1 1 0
chr11:57818119|57818249 hsa-miR-6165 1 0 0
chr11:57818119|57818249 hsa-miR-6745 1 1 0
chr11:57818119|57818249 hsa-miR-12115 1 1 0
chr11:57818119|57818249 hsa-miR-12128 0 1 0
chr11:57818119|57818249 hsa-miR-135a-3p 1 0 0
chr11:57818119|57818249 hsa-miR-4433b-3p 1 0 0
chr11:57818119|57818249 hsa-miR-1247-3p 1 0 0
chr11:57818119|57818249 hsa-miR-6809-5p 1 0 0
chr11:57818119|57818249 hsa-miR-4433a-3p 1 1 0
chr11:57818119|57818249 hsa-miR-125a-3p 1 0 0
chr11:57818119|57818249 hsa-miR-6510-5p 1 0 0
chr11:57818119|57818249 hsa-miR-1227-5p 1 0 0
chr11:57818119|57818249 hsa-miR-3663-3p 1 1 0
chr11:57818119|57818249 hsa-miR-7847-3p 1 0 0
chr11:57818119|57818249 hsa-miR-4722-5p 1 0 0
chr11:57818119|57818249 hsa-miR-7154-3p 1 0 0
chr11:57818119|57818249 hsa-miR-505-5p 0 1 0
chr11:57818119|57818249 hsa-miR-874-5p 1 0 0
chr11:57818119|57818249 hsa-miR-4711-5p 1 0 0
chr11:57818119|57818249 hsa-miR-503-5p 1 0 0
chr11:57818119|57818249 hsa-miR-6827-5p 1 0 0
chr11:57818119|57818249 hsa-miR-2467-3p 1 0 0
chr11:57818119|57818249 hsa-miR-6810-5p 1 0 0
chr11:57818119|57818249 hsa-miR-5088-5p 1 0 0
chr11:57818119|57818249 hsa-miR-1226-5p 1 0 0
chr11:57818119|57818249 hsa-miR-4786-3p 1 0 0
chr11:57818119|57818249 hsa-miR-4640-5p 1 0 0
chr11:57818119|57818249 hsa-miR-6753-5p 1 0 0
chr11:57818119|57818249 hsa-miR-4690-5p 1 0 0
chr11:57818119|57818249 hsa-miR-4732-5p 1 0 0
chr11:57818119|57818249 hsa-miR-6847-5p 1 0 0
chr11:57818119|57818249 hsa-miR-4733-3p 1 0 0
chr11:57818119|57818249 hsa-miR-937-5p 1 0 0
chr11:57818119|57818249 hsa-miR-6877-5p 1 0 0
chr11:57818119|57818249 hsa-miR-3065-3p 1 0 0
chr11:57818119|57818249 hsa-miR-6895-5p 1 0 0
chr11:57818119|57818249 hsa-miR-339-3p 1 0 0
chr11:57818119|57818249 hsa-miR-5004-5p 0 1 0
chr11:57818119|57818249 hsa-miR-5197-3p 0 1 0
chr11:57818119|57818249 hsa-miR-4652-3p 0 1 0
chr11:57818119|57818249 hsa-miR-6879-5p 1 0 0
chr11:57818119|57818249 hsa-miR-4632-5p 1 0 0
chr11:57818119|57818249 hsa-miR-4685-5p 1 1 0
chr11:57818119|57818249 hsa-miR-4726-5p 1 0 0
chr11:57818119|57818249 hsa-miR-4745-5p 1 0 0
chr11:57818119|57818249 hsa-miR-6735-5p 1 1 0
chr11:57818119|57818249 hsa-miR-6858-5p 1 0 0
chr11:57818119|57818249 hsa-miR-4436b-3p 1 0 0
chr11:57818119|57818249 hsa-miR-6831-5p 1 0 0
chr11:57818119|57818249 hsa-miR-1910-3p 1 0 0
chr11:57818119|57818249 hsa-miR-6511a-5p 1 0 0
chr11:57818119|57818249 hsa-miR-6739-5p 1 1 0
chr11:57818119|57818249 hsa-miR-6856-5p 1 0 0
chr11:57818119|57818249 hsa-miR-7843-5p 1 0 0
chr11:57818119|57818249 hsa-miR-10398-3p 1 0 0
chr11:57818119|57818249 hsa-miR-3679-5p 1 0 0
chr11:57818119|57818249 hsa-miR-6849-5p 1 0 0
chr11:57818119|57818249 hsa-miR-6762-5p 1 0 0
chr11:57818119|57818249 hsa-miR-6529-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:57818119|57818249
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MPHPDLAPLLISLVLFCSFPGALFSRWGVGNRTAVGFWG
Nucleotide Sequence TTGCCCCATCCAGACCTGGCTCCACTCTTGATCTCTCTTGTCCTCTTCTGCTCTTTTCCTGGTGCTCTTTTTTCTCGGTGGGGTGTGGGTAATAGAACAGCCGTGGGCTTTTGGGGA
CircID chr11:57818119|57818249
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MSSSALFLVLFFLGGVWVIEQPWAFGD
Nucleotide Sequence TTGTCCTCTTCTGCTCTTTTCCTGGTGCTCTTTTTTCTCGGTGGGGTGTGGGTAATAGAACAGCCGTGGGCTTTTGGGGAC
CircID chr11:57818119|57818249
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MFYYPHPTEKKEHQEKSRRGQERSRVEPGLDGAIFPV
Nucleotide Sequence CTGTTCTATTACCCACACCCCACCGAGAAAAAAGAGCACCAGGAAAAGAGCAGAAGAGGACAAGAGAGATCAAGAGTGGAGCCAGGTCTGGATGGGGCAATTTTCCCTGTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab