CircRNA Information

General Information
circRNA Basic Information
CircID chr11:58617534|58617634
Strand +
CircType exon
Host Gene ENSG00000186660.14;
Algorism CIRI2;
Sequence CAGCCCTTCAGTGCCTCCACTGCTGCCGCTTCCCACAAAGATCTTCCCATCAGCCATCAGGCTCACCCGTTCCGTCCCACTGCAGTATGACTTTGACATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:58617534|58617634 hsa-miR-217-5p 0 0 1
chr11:58617534|58617634 hsa-miR-217-3p 0 0 1
chr11:58617534|58617634 hsa-miR-184 0 0 1
chr11:58617534|58617634 hsa-miR-520g-5p 0 0 1
chr11:58617534|58617634 hsa-miR-520g-3p 0 0 1
chr11:58617534|58617634 hsa-miR-520h 0 0 1
chr11:58617534|58617634 hsa-miR-650 0 0 1
chr11:58617534|58617634 hsa-miR-509-3-5p 0 0 1
chr11:58617534|58617634 hsa-miR-509-5p 0 0 1
chr11:58617534|58617634 hsa-miR-1201 0 0 1
chr11:58617534|58617634 hsa-miR-1183 1 0 0
chr11:58617534|58617634 hsa-miR-2861 1 0 0
chr11:58617534|58617634 hsa-miR-3175 1 0 0
chr11:58617534|58617634 hsa-miR-3196 1 0 0
chr11:58617534|58617634 hsa-miR-4298 1 0 0
chr11:58617534|58617634 hsa-miR-4322 1 0 0
chr11:58617534|58617634 hsa-miR-4271 1 0 0
chr11:58617534|58617634 hsa-miR-3937 1 0 0
chr11:58617534|58617634 hsa-miR-4467 1 0 0
chr11:58617534|58617634 hsa-miR-3689c 1 0 0
chr11:58617534|58617634 hsa-miR-4506 1 0 0
chr11:58617534|58617634 hsa-miR-4519 1 0 0
chr11:58617534|58617634 hsa-miR-3960 1 0 0
chr11:58617534|58617634 hsa-miR-4651 1 0 0
chr11:58617534|58617634 hsa-miR-4654 1 0 0
chr11:58617534|58617634 hsa-miR-4688 1 0 0
chr11:58617534|58617634 hsa-miR-4689 1 0 0
chr11:58617534|58617634 hsa-miR-4706 1 0 0
chr11:58617534|58617634 hsa-miR-4739 1 0 0
chr11:58617534|58617634 hsa-miR-5787 1 0 0
chr11:58617534|58617634 hsa-miR-6081 1 0 0
chr11:58617534|58617634 hsa-miR-6090 1 0 0
chr11:58617534|58617634 hsa-miR-8072 1 0 0
chr11:58617534|58617634 hsa-miR-8075 1 0 0
chr11:58617534|58617634 hsa-miR-12120 1 0 0
chr11:58617534|58617634 hsa-miR-17-3p 1 0 0
chr11:58617534|58617634 hsa-miR-6734-5p 1 0 0
chr11:58617534|58617634 hsa-miR-4433a-3p 1 0 0
chr11:58617534|58617634 hsa-miR-6765-5p 1 0 0
chr11:58617534|58617634 hsa-miR-671-5p 1 0 0
chr11:58617534|58617634 hsa-miR-3150a-3p 1 0 0
chr11:58617534|58617634 hsa-miR-7106-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6894-5p 1 0 0
chr11:58617534|58617634 hsa-miR-4687-3p 1 0 0
chr11:58617534|58617634 hsa-miR-3192-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6757-5p 1 0 0
chr11:58617534|58617634 hsa-miR-593-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6820-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6759-5p 1 0 0
chr11:58617534|58617634 hsa-miR-8069 1 0 0
chr11:58617534|58617634 hsa-miR-6871-5p 1 0 0
chr11:58617534|58617634 hsa-miR-1292-5p 1 0 0
chr11:58617534|58617634 hsa-miR-3180-3p 1 0 0
chr11:58617534|58617634 hsa-miR-6796-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6798-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6782-5p 1 0 0
chr11:58617534|58617634 hsa-miR-3156-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6810-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6850-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6786-5p 1 0 0
chr11:58617534|58617634 hsa-miR-885-3p 1 0 0
chr11:58617534|58617634 hsa-miR-92b-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6749-5p 1 0 0
chr11:58617534|58617634 hsa-miR-149-3p 1 0 0
chr11:58617534|58617634 hsa-miR-4727-3p 1 0 0
chr11:58617534|58617634 hsa-miR-4750-5p 1 0 0
chr11:58617534|58617634 hsa-miR-10400-5p 1 0 0
chr11:58617534|58617634 hsa-miR-1233-5p 1 0 0
chr11:58617534|58617634 hsa-miR-1273h-5p 1 0 0
chr11:58617534|58617634 hsa-miR-3689b-3p 1 0 0
chr11:58617534|58617634 hsa-miR-4763-3p 1 0 0
chr11:58617534|58617634 hsa-miR-6769b-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6778-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6812-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6816-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6870-5p 1 0 0
chr11:58617534|58617634 hsa-miR-1343-5p 1 0 0
chr11:58617534|58617634 hsa-miR-3180 1 0 0
chr11:58617534|58617634 hsa-miR-5001-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6756-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6769a-5p 1 0 0
chr11:58617534|58617634 hsa-miR-10401-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6763-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6779-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6780a-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6797-5p 1 0 0
chr11:58617534|58617634 hsa-miR-3620-5p 1 0 0
chr11:58617534|58617634 hsa-miR-5196-5p 1 0 0
chr11:58617534|58617634 hsa-miR-3689a-3p 1 0 0
chr11:58617534|58617634 hsa-miR-449c-5p 1 0 0
chr11:58617534|58617634 hsa-miR-4701-3p 1 0 0
chr11:58617534|58617634 hsa-miR-6794-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6846-5p 1 0 0
chr11:58617534|58617634 hsa-miR-939-5p 1 0 0
chr11:58617534|58617634 hsa-miR-4769-5p 1 0 0
chr11:58617534|58617634 hsa-miR-3940-5p 1 0 0
chr11:58617534|58617634 hsa-miR-3679-5p 1 0 0
chr11:58617534|58617634 hsa-miR-4646-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6785-5p 1 0 0
chr11:58617534|58617634 hsa-miR-6724-5p 1 0 0
chr11:58617534|58617634 hsa-miR-200c-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:58617534|58617634
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MLPLPTKIFPSAIRLTRSVPLQYDFDI
Nucleotide Sequence CTGCTGCCGCTTCCCACAAAGATCTTCCCATCAGCCATCAGGCTCACCCGTTCCGTCCCACTGCAGTATGACTTTGACATC
CircID chr11:58617534|58617634
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MSKSYCSGTERVSLMADGKIFVGSGSSGGTEGL
Nucleotide Sequence ATGTCAAAGTCATACTGCAGTGGGACGGAACGGGTGAGCCTGATGGCTGATGGGAAGATCTTTGTGGGAAGCGGCAGCAGTGGAGGCACTGAAGGGCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab