CircRNA Information

General Information
circRNA Basic Information
CircID chr11:60922690|60922852
Strand +
CircType exon
Host Gene ENSG00000110108.8;
Algorism CIRI2;
Sequence TTTCCTACATACAGTATGGCAGCAGGCAAGCAGAAGGCCCTGCTGGCTCGGATTAAGGCACTTGAAAGAGACACAAGGTACATCCTCCTCCCCTGCAGCCCCCACAGGCCTCAGGGGACCCTGTTTCCCCACCCTTTATCCTCAGGTCCCCTTACCCCTGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:60922690|60922852 hsa-miR-26b-5p 0 0 1
chr11:60922690|60922852 hsa-miR-26b-3p 0 0 1
chr11:60922690|60922852 hsa-miR-214-5p 0 0 1
chr11:60922690|60922852 hsa-miR-214-3p 0 0 1
chr11:60922690|60922852 hsa-miR-370-5p 0 0 1
chr11:60922690|60922852 hsa-miR-370-3p 0 0 1
chr11:60922690|60922852 hsa-miR-492 0 1 1
chr11:60922690|60922852 hsa-miR-498-5p 0 0 1
chr11:60922690|60922852 hsa-miR-498-3p 0 0 1
chr11:60922690|60922852 hsa-miR-519e-5p 0 0 1
chr11:60922690|60922852 hsa-miR-519e-3p 0 0 1
chr11:60922690|60922852 hsa-miR-555 1 1 1
chr11:60922690|60922852 hsa-miR-567 0 0 1
chr11:60922690|60922852 hsa-miR-581 0 1 1
chr11:60922690|60922852 hsa-miR-592 0 0 1
chr11:60922690|60922852 hsa-miR-593-5p 0 0 1
chr11:60922690|60922852 hsa-miR-593-3p 0 0 1
chr11:60922690|60922852 hsa-miR-599 0 0 1
chr11:60922690|60922852 hsa-miR-765 0 0 1
chr11:60922690|60922852 hsa-miR-297 0 0 1
chr11:60922690|60922852 hsa-miR-1183 0 0 1
chr11:60922690|60922852 hsa-miR-1237-5p 0 0 1
chr11:60922690|60922852 hsa-miR-1237-3p 0 0 1
chr11:60922690|60922852 hsa-miR-1205 0 0 1
chr11:60922690|60922852 hsa-miR-1297 0 0 1
chr11:60922690|60922852 hsa-miR-1265 0 0 1
chr11:60922690|60922852 hsa-miR-491-5p 0 1 1
chr11:60922690|60922852 hsa-miR-615-3p 0 0 1
chr11:60922690|60922852 hsa-miR-331-3p 0 0 1
chr11:60922690|60922852 hsa-miR-1207-5p 1 0 1
chr11:60922690|60922852 hsa-miR-125a-5p 0 0 1
chr11:60922690|60922852 hsa-miR-515-3p 0 1 1
chr11:60922690|60922852 hsa-miR-125b 0 0 1
chr11:60922690|60922852 hsa-miR-26a 0 0 1
chr11:60922690|60922852 hsa-miR-1185 0 0 1
chr11:60922690|60922852 hsa-miR-663a 1 0 0
chr11:60922690|60922852 hsa-miR-920 1 0 0
chr11:60922690|60922852 hsa-miR-1182 0 1 0
chr11:60922690|60922852 hsa-miR-1202 1 0 0
chr11:60922690|60922852 hsa-miR-2110 0 1 0
chr11:60922690|60922852 hsa-miR-2861 1 0 0
chr11:60922690|60922852 hsa-miR-3132 1 0 0
chr11:60922690|60922852 hsa-miR-544b 0 1 0
chr11:60922690|60922852 hsa-miR-3196 1 0 0
chr11:60922690|60922852 hsa-miR-4261 0 1 0
chr11:60922690|60922852 hsa-miR-3649 1 1 0
chr11:60922690|60922852 hsa-miR-3909 0 1 0
chr11:60922690|60922852 hsa-miR-4447 0 1 0
chr11:60922690|60922852 hsa-miR-4467 1 0 0
chr11:60922690|60922852 hsa-miR-4498 1 0 0
chr11:60922690|60922852 hsa-miR-4512 0 1 0
chr11:60922690|60922852 hsa-miR-4656 1 0 0
chr11:60922690|60922852 hsa-miR-4689 1 0 0
chr11:60922690|60922852 hsa-miR-4710 1 0 0
chr11:60922690|60922852 hsa-miR-4739 1 0 0
chr11:60922690|60922852 hsa-miR-4741 1 0 0
chr11:60922690|60922852 hsa-miR-5787 1 0 0
chr11:60922690|60922852 hsa-miR-6085 1 0 0
chr11:60922690|60922852 hsa-miR-6132 1 0 0
chr11:60922690|60922852 hsa-miR-7704 1 0 0
chr11:60922690|60922852 hsa-miR-8089 1 1 0
chr11:60922690|60922852 hsa-miR-12119 1 0 0
chr11:60922690|60922852 hsa-miR-6734-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6765-5p 1 0 0
chr11:60922690|60922852 hsa-miR-3150a-3p 1 0 0
chr11:60922690|60922852 hsa-miR-7106-5p 1 1 0
chr11:60922690|60922852 hsa-miR-6825-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6894-5p 1 1 0
chr11:60922690|60922852 hsa-miR-6857-5p 1 0 0
chr11:60922690|60922852 hsa-miR-4687-3p 1 0 0
chr11:60922690|60922852 hsa-miR-6510-5p 1 1 0
chr11:60922690|60922852 hsa-miR-7851-3p 1 0 0
chr11:60922690|60922852 hsa-miR-5187-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6089 1 0 0
chr11:60922690|60922852 hsa-miR-6721-5p 1 1 0
chr11:60922690|60922852 hsa-miR-197-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6796-5p 0 1 0
chr11:60922690|60922852 hsa-miR-6868-3p 0 1 0
chr11:60922690|60922852 hsa-miR-6829-5p 0 1 0
chr11:60922690|60922852 hsa-miR-6798-5p 1 0 0
chr11:60922690|60922852 hsa-miR-4753-3p 0 1 0
chr11:60922690|60922852 hsa-miR-6881-5p 1 1 0
chr11:60922690|60922852 hsa-miR-6782-5p 1 1 0
chr11:60922690|60922852 hsa-miR-5008-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6735-3p 0 1 0
chr11:60922690|60922852 hsa-miR-7109-5p 1 0 0
chr11:60922690|60922852 hsa-miR-1226-5p 1 0 0
chr11:60922690|60922852 hsa-miR-1229-5p 1 0 0
chr11:60922690|60922852 hsa-miR-1908-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6749-5p 1 0 0
chr11:60922690|60922852 hsa-miR-659-5p 1 0 0
chr11:60922690|60922852 hsa-miR-4787-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6781-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6892-5p 1 0 0
chr11:60922690|60922852 hsa-miR-664b-5p 1 0 0
chr11:60922690|60922852 hsa-miR-744-5p 1 0 0
chr11:60922690|60922852 hsa-miR-4649-3p 0 1 0
chr11:60922690|60922852 hsa-miR-3144-5p 1 1 0
chr11:60922690|60922852 hsa-miR-6885-3p 0 1 0
chr11:60922690|60922852 hsa-miR-4763-3p 1 1 0
chr11:60922690|60922852 hsa-miR-6787-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6812-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6726-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6756-5p 1 1 0
chr11:60922690|60922852 hsa-miR-6803-5p 1 0 0
chr11:60922690|60922852 hsa-miR-11181-3p 0 1 0
chr11:60922690|60922852 hsa-miR-6722-3p 1 1 0
chr11:60922690|60922852 hsa-miR-6875-5p 1 0 0
chr11:60922690|60922852 hsa-miR-7111-5p 1 0 0
chr11:60922690|60922852 hsa-miR-4728-5p 1 0 0
chr11:60922690|60922852 hsa-miR-5196-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6780b-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6836-5p 1 0 0
chr11:60922690|60922852 hsa-miR-10396a-5p 1 0 0
chr11:60922690|60922852 hsa-miR-10396b-5p 1 0 0
chr11:60922690|60922852 hsa-miR-1909-3p 1 1 0
chr11:60922690|60922852 hsa-miR-4649-5p 1 0 0
chr11:60922690|60922852 hsa-miR-4726-5p 1 0 0
chr11:60922690|60922852 hsa-miR-4749-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6729-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6738-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6794-5p 1 1 0
chr11:60922690|60922852 hsa-miR-6846-5p 1 1 0
chr11:60922690|60922852 hsa-miR-6848-5p 1 1 0
chr11:60922690|60922852 hsa-miR-6858-5p 1 0 0
chr11:60922690|60922852 hsa-miR-939-5p 1 0 0
chr11:60922690|60922852 hsa-miR-365a-5p 1 0 0
chr11:60922690|60922852 hsa-miR-365b-5p 1 0 0
chr11:60922690|60922852 hsa-miR-1914-3p 1 0 0
chr11:60922690|60922852 hsa-miR-6736-5p 1 0 0
chr11:60922690|60922852 hsa-miR-3679-5p 1 1 0
chr11:60922690|60922852 hsa-miR-4472 0 1 0
chr11:60922690|60922852 hsa-miR-4716-3p 1 0 0
chr11:60922690|60922852 hsa-miR-6766-5p 0 1 0
chr11:60922690|60922852 hsa-miR-6791-5p 1 0 0
chr11:60922690|60922852 hsa-miR-6893-3p 0 1 0
chr11:60922690|60922852 hsa-miR-769-3p 1 0 0
chr11:60922690|60922852 hsa-miR-33b-3p 0 1 0
chr11:60922690|60922852 hsa-miR-3622b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:60922690|60922852
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MAAGKQKALLARIKALERDTRYILLPCSPHRPQGTLFPHPLSSGPLTPA
Nucleotide Sequence ATGGCAGCAGGCAAGCAGAAGGCCCTGCTGGCTCGGATTAAGGCACTTGAAAGAGACACAAGGTACATCCTCCTCCCCTGCAGCCCCCACAGGCCTCAGGGGACCCTGTTTCCCCACCCTTTATCCTCAGGTCCCCTTACCCCTGCC
CircID chr11:60922690|60922852
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MKETQGTSSSPAAPTGLRGPCFPTLYPQVPLPLP
Nucleotide Sequence TTGAAAGAGACACAAGGTACATCCTCCTCCCCTGCAGCCCCCACAGGCCTCAGGGGACCCTGTTTCCCCACCCTTTATCCTCAGGTCCCCTTACCCCTGCCC
CircID chr11:60922690|60922852
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MRIKGGETGSPEACGGCRGGGCTLCLFQVP
Nucleotide Sequence CTGAGGATAAAGGGTGGGGAAACAGGGTCCCCTGAGGCCTGTGGGGGCTGCAGGGGAGGAGGATGTACCTTGTGTCTCTTTCAAGTGCCTTAA
CircID chr11:60922690|60922852
ORF Type ORF4
Protein Length 38
Nucleotide Length 114
Protein Sequence MRPVGAAGEEDVPCVSFKCLNPSQQGLLLACCHTVCRK
Nucleotide Sequence CTGAGGCCTGTGGGGGCTGCAGGGGAGGAGGATGTACCTTGTGTCTCTTTCAAGTGCCTTAATCCGAGCCAGCAGGGCCTTCTGCTTGCCTGCTGCCATACTGTATGTAGGAAA
CircID chr11:60922690|60922852
ORF Type ORF5
Protein Length 35
Nucleotide Length 105
Protein Sequence MWGLQGRRMYLVSLSSALIRASRAFCLPAAILYVG
Nucleotide Sequence CTGTGGGGGCTGCAGGGGAGGAGGATGTACCTTGTGTCTCTTTCAAGTGCCTTAATCCGAGCCAGCAGGGCCTTCTGCTTGCCTGCTGCCATACTGTATGTAGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab