CircRNA Information

General Information
circRNA Basic Information
CircID chr11:61302301|61302628
Strand +
CircType exon
Host Gene ENSG00000167986.12;
Algorism CIRI2;
Sequence CCCCACACAAGGCTCGGTGCTCTTCGGCACGGTCAACGGCATGATAGGTAAGGTCACCCCTGTGGGGCACACCCCCACACAGGCCTCCTTCCTGATACCAGCATTCTGAGGGACTGGGGAGAGCAACTGTACAAGACCTAGGTGTTTACTAGAGGAGGCTGCAGCACATTAGCCCTCCCTGAGCTGCTCACCTGGGCTGCCCTTTACGTAGAGGATACATGCTGTGGGGTTGAGCTCTCTGCAGCTCACTGCCTCCTTCACTTCTTCAGGGCTGGTGACCTCACTGTCAGAGAGCTGGTACAACCTCCTGCTGGACATGCAGAATCGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:61302301|61302628 hsa-miR-30a-5p 0 0 1
chr11:61302301|61302628 hsa-miR-30a-3p 0 0 1
chr11:61302301|61302628 hsa-miR-198 0 0 1
chr11:61302301|61302628 hsa-miR-30d-5p 0 0 1
chr11:61302301|61302628 hsa-miR-30d-3p 0 0 1
chr11:61302301|61302628 hsa-miR-34a-5p 0 0 1
chr11:61302301|61302628 hsa-miR-34a-3p 0 0 1
chr11:61302301|61302628 hsa-miR-214-5p 0 0 1
chr11:61302301|61302628 hsa-miR-214-3p 0 0 1
chr11:61302301|61302628 hsa-miR-30b-5p 0 0 1
chr11:61302301|61302628 hsa-miR-30b-3p 0 0 1
chr11:61302301|61302628 hsa-miR-30e-5p 0 0 1
chr11:61302301|61302628 hsa-miR-30e-3p 0 0 1
chr11:61302301|61302628 hsa-miR-325 0 0 1
chr11:61302301|61302628 hsa-miR-449a 0 0 1
chr11:61302301|61302628 hsa-miR-558 0 0 1
chr11:61302301|61302628 hsa-miR-581 0 0 1
chr11:61302301|61302628 hsa-miR-634 0 0 1
chr11:61302301|61302628 hsa-miR-643 0 0 1
chr11:61302301|61302628 hsa-miR-646 0 0 1
chr11:61302301|61302628 hsa-miR-650 0 1 1
chr11:61302301|61302628 hsa-miR-449b-5p 0 0 1
chr11:61302301|61302628 hsa-miR-449b-3p 0 0 1
chr11:61302301|61302628 hsa-miR-873-5p 0 0 1
chr11:61302301|61302628 hsa-miR-873-3p 0 0 1
chr11:61302301|61302628 hsa-miR-1226-5p 0 0 1
chr11:61302301|61302628 hsa-miR-1226-3p 0 0 1
chr11:61302301|61302628 hsa-miR-1294 0 1 1
chr11:61302301|61302628 hsa-miR-1266-5p 0 0 1
chr11:61302301|61302628 hsa-miR-1266-3p 0 0 1
chr11:61302301|61302628 hsa-miR-1252-5p 0 0 1
chr11:61302301|61302628 hsa-miR-1252-3p 0 0 1
chr11:61302301|61302628 hsa-miR-1321 0 1 1
chr11:61302301|61302628 hsa-miR-1827 0 1 1
chr11:61302301|61302628 hsa-miR-125a-3p 0 1 1
chr11:61302301|61302628 hsa-miR-491-5p 0 0 1
chr11:61302301|61302628 hsa-miR-615-3p 0 0 1
chr11:61302301|61302628 hsa-miR-1184 0 0 1
chr11:61302301|61302628 hsa-miR-628-3p 0 0 1
chr11:61302301|61302628 hsa-miR-582-5p 1 1 1
chr11:61302301|61302628 hsa-miR-338-3p 0 0 1
chr11:61302301|61302628 hsa-miR-34c-5p 0 1 1
chr11:61302301|61302628 hsa-miR-30c 0 0 1
chr11:61302301|61302628 hsa-miR-220c 0 0 1
chr11:61302301|61302628 hsa-miR-644 0 0 1
chr11:61302301|61302628 hsa-miR-138 0 0 1
chr11:61302301|61302628 hsa-miR-544 0 0 1
chr11:61302301|61302628 hsa-miR-147 0 0 1
chr11:61302301|61302628 hsa-miR-544a 0 1 0
chr11:61302301|61302628 hsa-miR-608 1 0 0
chr11:61302301|61302628 hsa-miR-1291 1 0 0
chr11:61302301|61302628 hsa-miR-3183 1 0 0
chr11:61302301|61302628 hsa-miR-4267 0 1 0
chr11:61302301|61302628 hsa-miR-4268 1 0 0
chr11:61302301|61302628 hsa-miR-3660 0 1 0
chr11:61302301|61302628 hsa-miR-4518 0 1 0
chr11:61302301|61302628 hsa-miR-4526 1 1 0
chr11:61302301|61302628 hsa-miR-4530 0 1 0
chr11:61302301|61302628 hsa-miR-4533 0 1 0
chr11:61302301|61302628 hsa-miR-4660 0 1 0
chr11:61302301|61302628 hsa-miR-4721 0 1 0
chr11:61302301|61302628 hsa-miR-4739 1 1 0
chr11:61302301|61302628 hsa-miR-4741 1 0 0
chr11:61302301|61302628 hsa-miR-5193 0 1 0
chr11:61302301|61302628 hsa-miR-5685 0 1 0
chr11:61302301|61302628 hsa-miR-6165 0 1 0
chr11:61302301|61302628 hsa-miR-9903 0 1 0
chr11:61302301|61302628 hsa-miR-9986 0 1 0
chr11:61302301|61302628 hsa-miR-12118 0 1 0
chr11:61302301|61302628 hsa-miR-12128 0 1 0
chr11:61302301|61302628 hsa-miR-138-5p 1 1 0
chr11:61302301|61302628 hsa-miR-6720-5p 1 0 0
chr11:61302301|61302628 hsa-miR-6854-5p 0 1 0
chr11:61302301|61302628 hsa-miR-4695-5p 1 1 0
chr11:61302301|61302628 hsa-miR-4722-5p 1 1 0
chr11:61302301|61302628 hsa-miR-593-5p 1 0 0
chr11:61302301|61302628 hsa-miR-6817-3p 0 1 0
chr11:61302301|61302628 hsa-miR-1915-5p 1 0 0
chr11:61302301|61302628 hsa-miR-6798-5p 0 1 0
chr11:61302301|61302628 hsa-miR-345-3p 0 1 0
chr11:61302301|61302628 hsa-miR-4640-5p 1 0 0
chr11:61302301|61302628 hsa-let-7d-5p 0 1 0
chr11:61302301|61302628 hsa-miR-6749-5p 1 0 0
chr11:61302301|61302628 hsa-miR-149-3p 0 1 0
chr11:61302301|61302628 hsa-miR-6800-5p 0 1 0
chr11:61302301|61302628 hsa-miR-7156-3p 0 1 0
chr11:61302301|61302628 hsa-miR-3158-5p 0 1 0
chr11:61302301|61302628 hsa-miR-339-5p 1 0 0
chr11:61302301|61302628 hsa-let-7c-5p 0 1 0
chr11:61302301|61302628 hsa-let-7a-5p 0 1 0
chr11:61302301|61302628 hsa-miR-4758-3p 0 1 0
chr11:61302301|61302628 hsa-miR-1911-5p 1 0 0
chr11:61302301|61302628 hsa-miR-6812-3p 1 0 0
chr11:61302301|61302628 hsa-miR-98-5p 0 1 0
chr11:61302301|61302628 hsa-miR-6812-5p 1 0 0
chr11:61302301|61302628 hsa-miR-6752-5p 1 1 0
chr11:61302301|61302628 hsa-miR-6754-5p 0 1 0
chr11:61302301|61302628 hsa-miR-6842-5p 0 1 0
chr11:61302301|61302628 hsa-miR-7110-5p 0 1 0
chr11:61302301|61302628 hsa-miR-6879-5p 0 1 0
chr11:61302301|61302628 hsa-miR-449c-5p 0 1 0
chr11:61302301|61302628 hsa-miR-4632-5p 1 1 0
chr11:61302301|61302628 hsa-miR-6883-5p 0 1 0
chr11:61302301|61302628 hsa-miR-6799-3p 1 0 0
chr11:61302301|61302628 hsa-miR-7843-5p 0 1 0
chr11:61302301|61302628 hsa-miR-10398-3p 1 0 0
chr11:61302301|61302628 hsa-miR-3173-3p 0 1 0
chr11:61302301|61302628 hsa-miR-4747-5p 0 1 0
chr11:61302301|61302628 hsa-miR-6876-5p 0 1 0
chr11:61302301|61302628 hsa-miR-6891-5p 0 1 0
chr11:61302301|61302628 hsa-miR-6785-5p 0 1 0
chr11:61302301|61302628 hsa-miR-550a-5p 1 0 0
chr11:61302301|61302628 hsa-miR-3130-5p 1 0 0
chr11:61302301|61302628 hsa-miR-4756-5p 0 1 0
chr11:61302301|61302628 hsa-miR-3619-5p 0 1 0
chr11:61302301|61302628 hsa-miR-4690-3p 1 1 0
chr11:61302301|61302628 hsa-miR-2682-5p 0 1 0
chr11:61302301|61302628 hsa-miR-5195-3p 1 0 0
chr11:61302301|61302628 hsa-miR-370-5p 0 1 0
chr11:61302301|61302628 hsa-miR-200a-5p 1 0 0
chr11:61302301|61302628 hsa-miR-301b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:61302301|61302628
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MLTWAALYVEDTCCGVELSAAHCLLHFFRAGDLTVRELVQPPAGHAES
Nucleotide Sequence CTGCTCACCTGGGCTGCCCTTTACGTAGAGGATACATGCTGTGGGGTTGAGCTCTCTGCAGCTCACTGCCTCCTTCACTTCTTCAGGGCTGGTGACCTCACTGTCAGAGAGCTGGTACAACCTCCTGCTGGACATGCAGAATCG

CircID chr11:61302301|61302628
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MSSLQLTASFTSSGLVTSLSESWYNLLLDMQNR
Nucleotide Sequence TTGAGCTCTCTGCAGCTCACTGCCTCCTTCACTTCTTCAGGGCTGGTGACCTCACTGTCAGAGAGCTGGTACAACCTCCTGCTGGACATGCAGAATCGA

CircID chr11:61302301|61302628
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MCGGVPHRGDLTYHAVDRAEEHRALCG
Nucleotide Sequence CTGTGTGGGGGTGTGCCCCACAGGGGTGACCTTACCTATCATGCCGTTGACCGTGCCGAAGAGCACCGAGCCTTGTGTGGG

CircID chr11:61302301|61302628
ORF Type ORF4
Protein Length 49
Nucleotide Length 150
Protein Sequence MSSRRLYQLSDSEVTSPEEVKEAVSCRELNPTACILYVKGSPGEQLREG
Nucleotide Sequence ATGTCCAGCAGGAGGTTGTACCAGCTCTCTGACAGTGAGGTCACCAGCCCTGAAGAAGTGAAGGAGGCAGTGAGCTGCAGAGAGCTCAACCCCACAGCATGTATCCTCTACGTAAAGGGCAGCCCAGGTGAGCAGCTCAGGGAGGGCTAA

CircID chr11:61302301|61302628
ORF Type ORF5
Protein Length 42
Nucleotide Length 126
Protein Sequence MLSPVPQNAGIRKEACVGVCPTGVTLPIMPLTVPKSTEPCVG
Nucleotide Sequence TTGCTCTCCCCAGTCCCTCAGAATGCTGGTATCAGGAAGGAGGCCTGTGTGGGGGTGTGCCCCACAGGGGTGACCTTACCTATCATGCCGTTGACCGTGCCGAAGAGCACCGAGCCTTGTGTGGGG

CircID chr11:61302301|61302628
ORF Type ORF6
Protein Length 26
Nucleotide Length 81
Protein Sequence MYSCSPQSLRMLVSGRRPVWGCAPQG
Nucleotide Sequence TTGTACAGTTGCTCTCCCCAGTCCCTCAGAATGCTGGTATCAGGAAGGAGGCCTGTGTGGGGGTGTGCCCCACAGGGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites