CircRNA Information

General Information
circRNA Basic Information
CircID chr11:61311795|61312060
Strand +
CircType exon
Host Gene ENSG00000167986.12;
Algorism CIRI2;
Sequence CCTCACCATTGGCACCATCGATGAGATCCAGAAGCTGCACATTCGCACAGTTCCCCTCTATGAGTCTCCAAGGTGAGGCCCAGGGTGGGAGAGTGGGAAGTGGGGGTTGGTGTAGGGTGCTTCTGACTTTCTAAGTGACACTGTTGTTCTGTACTTGTTCTGCAGGAAGATCTGCTACCAGGAAGTGTCCCAGTGTTTCGGGGTCCTCTCCAGCCGCATTGAAGTCCAAGACACGAGTGGGGGCACGACAGCCTTGAGGCCCAGCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:61311795|61312060 hsa-miR-187-5p 0 0 1
chr11:61311795|61312060 hsa-miR-187-3p 0 0 1
chr11:61311795|61312060 hsa-miR-141-5p 0 0 1
chr11:61311795|61312060 hsa-miR-141-3p 0 0 1
chr11:61311795|61312060 hsa-miR-150-5p 0 0 1
chr11:61311795|61312060 hsa-miR-150-3p 0 0 1
chr11:61311795|61312060 hsa-miR-185-5p 0 0 1
chr11:61311795|61312060 hsa-miR-185-3p 0 0 1
chr11:61311795|61312060 hsa-miR-200a-5p 0 0 1
chr11:61311795|61312060 hsa-miR-200a-3p 0 0 1
chr11:61311795|61312060 hsa-miR-431-5p 0 0 1
chr11:61311795|61312060 hsa-miR-431-3p 0 0 1
chr11:61311795|61312060 hsa-miR-376b-5p 0 0 1
chr11:61311795|61312060 hsa-miR-376b-3p 0 0 1
chr11:61311795|61312060 hsa-miR-432-5p 0 0 1
chr11:61311795|61312060 hsa-miR-432-3p 0 0 1
chr11:61311795|61312060 hsa-miR-597-5p 0 0 1
chr11:61311795|61312060 hsa-miR-597-3p 0 0 1
chr11:61311795|61312060 hsa-miR-620 0 0 1
chr11:61311795|61312060 hsa-miR-668-5p 0 0 1
chr11:61311795|61312060 hsa-miR-668-3p 0 0 1
chr11:61311795|61312060 hsa-miR-1301-5p 0 0 1
chr11:61311795|61312060 hsa-miR-1301-3p 0 0 1
chr11:61311795|61312060 hsa-miR-298 0 0 1
chr11:61311795|61312060 hsa-miR-1299 0 0 1
chr11:61311795|61312060 hsa-miR-1270 0 0 1
chr11:61311795|61312060 hsa-miR-532-3p 0 1 1
chr11:61311795|61312060 hsa-miR-1224-3p 0 0 1
chr11:61311795|61312060 hsa-miR-188-3p 0 0 1
chr11:61311795|61312060 hsa-miR-1302 0 0 1
chr11:61311795|61312060 hsa-miR-1260 0 0 1
chr11:61311795|61312060 hsa-miR-1280 0 0 1
chr11:61311795|61312060 hsa-miR-1269 0 0 1
chr11:61311795|61312060 hsa-miR-516b 0 0 1
chr11:61311795|61312060 hsa-miR-376a 0 0 1
chr11:61311795|61312060 hsa-miR-612 1 0 0
chr11:61311795|61312060 hsa-miR-890 0 1 0
chr11:61311795|61312060 hsa-miR-4286 0 1 0
chr11:61311795|61312060 hsa-miR-4292 1 1 0
chr11:61311795|61312060 hsa-miR-3943 1 1 0
chr11:61311795|61312060 hsa-miR-4430 0 1 0
chr11:61311795|61312060 hsa-miR-4660 1 0 0
chr11:61311795|61312060 hsa-miR-4751 0 1 0
chr11:61311795|61312060 hsa-miR-4752 1 0 0
chr11:61311795|61312060 hsa-miR-5706 0 1 0
chr11:61311795|61312060 hsa-miR-6860 1 0 0
chr11:61311795|61312060 hsa-miR-8059 0 1 0
chr11:61311795|61312060 hsa-miR-143-5p 1 0 0
chr11:61311795|61312060 hsa-miR-6845-3p 0 1 0
chr11:61311795|61312060 hsa-miR-7855-5p 1 0 0
chr11:61311795|61312060 hsa-miR-4713-5p 0 1 0
chr11:61311795|61312060 hsa-miR-939-3p 1 1 0
chr11:61311795|61312060 hsa-miR-7850-5p 1 1 0
chr11:61311795|61312060 hsa-miR-3678-3p 0 1 0
chr11:61311795|61312060 hsa-miR-6743-3p 1 0 0
chr11:61311795|61312060 hsa-miR-1226-3p 0 1 0
chr11:61311795|61312060 hsa-miR-6871-3p 0 1 0
chr11:61311795|61312060 hsa-miR-3074-5p 0 1 0
chr11:61311795|61312060 hsa-miR-6859-3p 0 1 0
chr11:61311795|61312060 hsa-miR-6777-3p 0 1 0
chr11:61311795|61312060 hsa-miR-331-3p 1 1 0
chr11:61311795|61312060 hsa-miR-3620-3p 0 1 0
chr11:61311795|61312060 hsa-miR-4639-3p 0 1 0
chr11:61311795|61312060 hsa-miR-6761-3p 1 0 0
chr11:61311795|61312060 hsa-miR-3162-3p 1 0 0
chr11:61311795|61312060 hsa-miR-589-3p 0 1 0
chr11:61311795|61312060 hsa-miR-3156-3p 0 1 0
chr11:61311795|61312060 hsa-miR-6774-5p 1 0 0
chr11:61311795|61312060 hsa-miR-939-5p 1 0 0
chr11:61311795|61312060 hsa-miR-3085-5p 0 1 0
chr11:61311795|61312060 hsa-miR-10396b-3p 1 0 0
chr11:61311795|61312060 hsa-miR-1914-3p 1 0 0
chr11:61311795|61312060 hsa-miR-330-5p 0 1 0
chr11:61311795|61312060 hsa-miR-6783-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:61311795|61312060
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MYLFCRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPS
Nucleotide Sequence CTGTACTTGTTCTGCAGGAAGATCTGCTACCAGGAAGTGTCCCAGTGTTTCGGGGTCCTCTCCAGCCGCATTGAAGTCCAAGACACGAGTGGGGGCACGACAGCCTTGAGGCCCAGC
CircID chr11:61311795|61312060
ORF Type ORF2
Protein Length 41
Nucleotide Length 126
Protein Sequence MAPSMRSRSCTFAQFPSMSLQGEAQGGRVGSGGWCRVLLTF
Nucleotide Sequence TTGGCACCATCGATGAGATCCAGAAGCTGCACATTCGCACAGTTCCCCTCTATGAGTCTCCAAGGTGAGGCCCAGGGTGGGAGAGTGGGAAGTGGGGGTTGGTGTAGGGTGCTTCTGACTTTCTAA
CircID chr11:61311795|61312060
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MLFCTCSAGRSATRKCPSVSGSSPAALKSKTRVGARQP
Nucleotide Sequence CTGTTGTTCTGTACTTGTTCTGCAGGAAGATCTGCTACCAGGAAGTGTCCCAGTGTTTCGGGGTCCTCTCCAGCCGCATTGAAGTCCAAGACACGAGTGGGGGCACGACAGCCTTGA
CircID chr11:61311795|61312060
ORF Type ORF4
Protein Length 82
Nucleotide Length 249
Protein Sequence MSCPHSCLGLQCGWRGPRNTGTLPGSRSSCRTSTEQQCHLESQKHPTPTPTSHSPTLGLTLETHRGELCECAASGSHRWCQW
Nucleotide Sequence CTGTCGTGCCCCCACTCGTGTCTTGGACTTCAATGCGGCTGGAGAGGACCCCGAAACACTGGGACACTTCCTGGTAGCAGATCTTCCTGCAGAACAAGTACAGAACAACAGTGTCACTTAGAAAGTCAGAAGCACCCTACACCAACCCCCACTTCCCACTCTCCCACCCTGGGCCTCACCTTGGAGACTCATAGAGGGGAACTGTGCGAATGTGCAGCTTCTGGATCTCATCGATGGTGCCAATGGTGA
CircID chr11:61311795|61312060
ORF Type ORF5
Protein Length 32
Nucleotide Length 99
Protein Sequence MDFNAAGEDPETLGHFLVADLPAEQVQNNSVT
Nucleotide Sequence TTGGACTTCAATGCGGCTGGAGAGGACCCCGAAACACTGGGACACTTCCTGGTAGCAGATCTTCCTGCAGAACAAGTACAGAACAACAGTGTCACTTAG
CircID chr11:61311795|61312060
ORF Type ORF6
Protein Length 29
Nucleotide Length 90
Protein Sequence LGLKAVVPPLVSWTSMRLERTPKHWDTSW
Nucleotide Sequence CTGGGCCTCAAGGCTGTCGTGCCCCCACTCGTGTCTTGGACTTCAATGCGGCTGGAGAGGACCCCGAAACACTGGGACACTTCCTGGTAG
CircID chr11:61311795|61312060
ORF Type ORF7
Protein Length 35
Nucleotide Length 108
Protein Sequence MQNKYRTTVSLRKSEAPYTNPHFPLSHPGPHLGDS
Nucleotide Sequence CTGCAGAACAAGTACAGAACAACAGTGTCACTTAGAAAGTCAGAAGCACCCTACACCAACCCCCACTTCCCACTCTCCCACCCTGGGCCTCACCTTGGAGACTCATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab