CircRNA Information

General Information
circRNA Basic Information
CircID chr11:61326861|61329562
Strand -
CircType exon
Host Gene ENSG00000167986.12;
Algorism CIRI2;
Sequence CTCATAGGTTTTTACGTGCCGCCCCTGAGGGTCCTGGTAGACAAAGCAAATAGTAGGTGCTTGGCAACCATATAGGAACTTGACATCAATGACATGCAGCTCCTCCAGGCGGATGTTGAAGGCCTTGAGTTCTTTATTATCGCGATCTAGTGGAATAACCTTGAAAAGGCCATCATAGAGACGCAGGCCAATCATCCGGCACTCAGGGTCAATGATGCCAATAATGCCGGTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:61326861|61329562 hsa-miR-154-5p 0 0 1
chr11:61326861|61329562 hsa-miR-154-3p 0 0 1
chr11:61326861|61329562 hsa-miR-186-5p 0 0 1
chr11:61326861|61329562 hsa-miR-186-3p 0 0 1
chr11:61326861|61329562 hsa-miR-498-5p 0 0 1
chr11:61326861|61329562 hsa-miR-498-3p 0 0 1
chr11:61326861|61329562 hsa-miR-504-5p 0 0 1
chr11:61326861|61329562 hsa-miR-504-3p 0 0 1
chr11:61326861|61329562 hsa-miR-558 0 0 1
chr11:61326861|61329562 hsa-miR-584-5p 0 0 1
chr11:61326861|61329562 hsa-miR-584-3p 0 0 1
chr11:61326861|61329562 hsa-miR-616-5p 0 0 1
chr11:61326861|61329562 hsa-miR-616-3p 0 0 1
chr11:61326861|61329562 hsa-miR-421 0 0 1
chr11:61326861|61329562 hsa-miR-765 0 0 1
chr11:61326861|61329562 hsa-miR-708-5p 0 0 1
chr11:61326861|61329562 hsa-miR-708-3p 0 0 1
chr11:61326861|61329562 hsa-miR-934 0 0 1
chr11:61326861|61329562 hsa-miR-1305 0 0 1
chr11:61326861|61329562 hsa-miR-1266-5p 0 0 1
chr11:61326861|61329562 hsa-miR-1266-3p 0 0 1
chr11:61326861|61329562 hsa-miR-1272 0 0 1
chr11:61326861|61329562 hsa-miR-1322 0 0 1
chr11:61326861|61329562 hsa-miR-28-3p 0 1 1
chr11:61326861|61329562 hsa-miR-509-3p 0 0 1
chr11:61326861|61329562 hsa-miR-28-5p 0 1 1
chr11:61326861|61329562 hsa-miR-337-3p 0 0 1
chr11:61326861|61329562 hsa-miR-125a-5p 0 0 1
chr11:61326861|61329562 hsa-miR-548d-3p 0 0 1
chr11:61326861|61329562 hsa-miR-125b 0 0 1
chr11:61326861|61329562 hsa-miR-1254 0 0 1
chr11:61326861|61329562 hsa-miR-371-3p 0 0 1
chr11:61326861|61329562 hsa-miR-611 1 0 0
chr11:61326861|61329562 hsa-miR-661 1 0 0
chr11:61326861|61329562 hsa-miR-3196 1 1 0
chr11:61326861|61329562 hsa-miR-4642 1 1 0
chr11:61326861|61329562 hsa-miR-4688 1 0 0
chr11:61326861|61329562 hsa-miR-4666b 0 1 0
chr11:61326861|61329562 hsa-miR-5698 1 1 0
chr11:61326861|61329562 hsa-miR-7706 1 0 0
chr11:61326861|61329562 hsa-miR-12120 1 1 0
chr11:61326861|61329562 hsa-miR-12128 1 0 0
chr11:61326861|61329562 hsa-miR-218-2-3p 1 0 0
chr11:61326861|61329562 hsa-miR-3663-3p 1 0 0
chr11:61326861|61329562 hsa-miR-6805-5p 1 0 0
chr11:61326861|61329562 hsa-miR-5006-5p 1 0 0
chr11:61326861|61329562 hsa-miR-1909-5p 1 1 0
chr11:61326861|61329562 hsa-miR-6501-5p 0 1 0
chr11:61326861|61329562 hsa-miR-758-5p 0 1 0
chr11:61326861|61329562 hsa-miR-6816-5p 1 0 0
chr11:61326861|61329562 hsa-miR-6813-5p 1 0 0
chr11:61326861|61329562 hsa-miR-6836-5p 1 0 0
chr11:61326861|61329562 hsa-miR-1237-5p 1 0 0
chr11:61326861|61329562 hsa-miR-4685-5p 1 1 0
chr11:61326861|61329562 hsa-miR-6837-5p 1 0 0
chr11:61326861|61329562 hsa-miR-4720-5p 0 1 0
chr11:61326861|61329562 hsa-miR-1245b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:61326861|61329562
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MTSMTCSSSRRMLKALSSLLSRSSGITLKRPS
Nucleotide Sequence TTGACATCAATGACATGCAGCTCCTCCAGGCGGATGTTGAAGGCCTTGAGTTCTTTATTATCGCGATCTAGTGGAATAACCTTGAAAAGGCCATCATAG

CircID chr11:61326861|61329562
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MSLMSSSYMVAKHLLFALSTRTLRGGT
Nucleotide Sequence ATGTCATTGATGTCAAGTTCCTATATGGTTGCCAAGCACCTACTATTTGCTTTGTCTACCAGGACCCTCAGGGGCGGCACGTAA

CircID chr11:61326861|61329562
ORF Type ORF3
Protein Length 65
Nucleotide Length 195
Protein Sequence MIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYE
Nucleotide Sequence ATGATTGGCCTGCGTCTCTATGATGGCCTTTTCAAGGTTATTCCACTAGATCGCGATAATAAAGAACTCAAGGCCTTCAACATCCGCCTGGAGGAGCTGCATGTCATTGATGTCAAGTTCCTATATGGTTGCCAAGCACCTACTATTTGCTTTGTCTACCAGGACCCTCAGGGGCGGCACGTAAAAACCTATGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites