CircRNA Information

General Information
circRNA Basic Information
CircID chr11:61403932|61404225
Strand +
CircType exon
Host Gene ENSG00000149532.14;
Algorism CIRI2;
Sequence CCCTTGCTAACATACCACTTCTTTGTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAATTACCTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTTTATTTCTTTGACCTCCCAGAGGGCTGAACTCTTTCAACTCTGCGCTGCCCAGCCTTCTCAGTGGACTTGCCCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCTCTGCTGCTTAGTGCTTGGGTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:61403932|61404225 hsa-miR-15a-5p 0 0 1
chr11:61403932|61404225 hsa-miR-15a-3p 0 0 1
chr11:61403932|61404225 hsa-miR-15b-5p 0 0 1
chr11:61403932|61404225 hsa-miR-15b-3p 0 0 1
chr11:61403932|61404225 hsa-miR-195-5p 0 0 1
chr11:61403932|61404225 hsa-miR-195-3p 0 0 1
chr11:61403932|61404225 hsa-miR-326 0 0 1
chr11:61403932|61404225 hsa-miR-424-5p 0 0 1
chr11:61403932|61404225 hsa-miR-424-3p 0 0 1
chr11:61403932|61404225 hsa-miR-488-5p 0 0 1
chr11:61403932|61404225 hsa-miR-488-3p 0 0 1
chr11:61403932|61404225 hsa-miR-497-5p 0 0 1
chr11:61403932|61404225 hsa-miR-497-3p 0 0 1
chr11:61403932|61404225 hsa-miR-562 0 0 1
chr11:61403932|61404225 hsa-miR-567 0 0 1
chr11:61403932|61404225 hsa-miR-612 1 1 1
chr11:61403932|61404225 hsa-miR-873-5p 0 0 1
chr11:61403932|61404225 hsa-miR-873-3p 0 0 1
chr11:61403932|61404225 hsa-miR-760 0 0 1
chr11:61403932|61404225 hsa-miR-922 0 1 1
chr11:61403932|61404225 hsa-miR-942-5p 0 0 1
chr11:61403932|61404225 hsa-miR-942-3p 0 0 1
chr11:61403932|61404225 hsa-miR-1293 0 0 1
chr11:61403932|61404225 hsa-miR-1253 0 0 1
chr11:61403932|61404225 hsa-miR-548m 0 0 1
chr11:61403932|61404225 hsa-miR-885-3p 1 1 1
chr11:61403932|61404225 hsa-miR-423-5p 0 0 1
chr11:61403932|61404225 hsa-miR-875-3p 0 0 1
chr11:61403932|61404225 hsa-miR-330-5p 0 0 1
chr11:61403932|61404225 hsa-miR-16 0 0 1
chr11:61403932|61404225 hsa-miR-1300 0 0 1
chr11:61403932|61404225 hsa-miR-1285 0 0 1
chr11:61403932|61404225 hsa-miR-219-1-3p 0 0 1
chr11:61403932|61404225 hsa-miR-449a 1 0 0
chr11:61403932|61404225 hsa-miR-608 1 0 0
chr11:61403932|61404225 hsa-miR-663a 1 0 0
chr11:61403932|61404225 hsa-miR-762 1 1 0
chr11:61403932|61404225 hsa-miR-936 0 1 0
chr11:61403932|61404225 hsa-miR-3141 1 0 0
chr11:61403932|61404225 hsa-miR-3147 1 1 0
chr11:61403932|61404225 hsa-miR-3153 0 1 0
chr11:61403932|61404225 hsa-miR-4270 1 0 0
chr11:61403932|61404225 hsa-miR-3652 1 1 0
chr11:61403932|61404225 hsa-miR-4430 1 0 0
chr11:61403932|61404225 hsa-miR-3135b 1 0 0
chr11:61403932|61404225 hsa-miR-4492 1 0 0
chr11:61403932|61404225 hsa-miR-4498 1 1 0
chr11:61403932|61404225 hsa-miR-4505 1 0 0
chr11:61403932|61404225 hsa-miR-4507 1 0 0
chr11:61403932|61404225 hsa-miR-4508 1 0 0
chr11:61403932|61404225 hsa-miR-1587 1 0 0
chr11:61403932|61404225 hsa-miR-4656 1 0 0
chr11:61403932|61404225 hsa-miR-4688 1 0 0
chr11:61403932|61404225 hsa-miR-4721 1 0 0
chr11:61403932|61404225 hsa-miR-4741 1 0 0
chr11:61403932|61404225 hsa-miR-4748 1 0 0
chr11:61403932|61404225 hsa-miR-5787 1 1 0
chr11:61403932|61404225 hsa-miR-6085 1 0 0
chr11:61403932|61404225 hsa-miR-6125 1 0 0
chr11:61403932|61404225 hsa-miR-6132 1 0 0
chr11:61403932|61404225 hsa-miR-6165 0 1 0
chr11:61403932|61404225 hsa-miR-6860 1 1 0
chr11:61403932|61404225 hsa-miR-4433b-3p 1 0 0
chr11:61403932|61404225 hsa-miR-3194-3p 0 1 0
chr11:61403932|61404225 hsa-miR-1287-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6861-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6728-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6804-5p 1 0 0
chr11:61403932|61404225 hsa-miR-3192-5p 1 1 0
chr11:61403932|61404225 hsa-miR-6757-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6873-5p 0 1 0
chr11:61403932|61404225 hsa-miR-4695-5p 1 0 0
chr11:61403932|61404225 hsa-miR-4722-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6730-5p 1 1 0
chr11:61403932|61404225 hsa-miR-4755-3p 0 1 0
chr11:61403932|61404225 hsa-miR-4677-5p 0 1 0
chr11:61403932|61404225 hsa-miR-197-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6871-5p 1 0 0
chr11:61403932|61404225 hsa-miR-185-3p 1 0 0
chr11:61403932|61404225 hsa-miR-6829-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6732-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6770-5p 0 1 0
chr11:61403932|61404225 hsa-miR-6782-5p 1 0 0
chr11:61403932|61404225 hsa-miR-30b-3p 0 1 0
chr11:61403932|61404225 hsa-miR-5088-5p 1 0 0
chr11:61403932|61404225 hsa-miR-204-3p 1 1 0
chr11:61403932|61404225 hsa-miR-1229-5p 1 0 0
chr11:61403932|61404225 hsa-miR-296-3p 1 0 0
chr11:61403932|61404225 hsa-miR-6823-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6847-5p 1 0 0
chr11:61403932|61404225 hsa-miR-4787-5p 1 0 0
chr11:61403932|61404225 hsa-miR-4446-3p 1 1 0
chr11:61403932|61404225 hsa-miR-149-3p 1 0 0
chr11:61403932|61404225 hsa-miR-3162-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6781-5p 1 0 0
chr11:61403932|61404225 hsa-miR-5584-5p 0 1 0
chr11:61403932|61404225 hsa-miR-2276-5p 0 1 0
chr11:61403932|61404225 hsa-miR-214-3p 0 1 0
chr11:61403932|61404225 hsa-miR-4727-5p 0 1 0
chr11:61403932|61404225 hsa-miR-196a-5p 0 1 0
chr11:61403932|61404225 hsa-miR-16-5p 0 1 0
chr11:61403932|61404225 hsa-miR-10400-5p 1 0 0
chr11:61403932|61404225 hsa-miR-1207-5p 1 0 0
chr11:61403932|61404225 hsa-miR-1233-5p 0 1 0
chr11:61403932|61404225 hsa-miR-1273h-5p 1 1 0
chr11:61403932|61404225 hsa-miR-4763-3p 1 0 0
chr11:61403932|61404225 hsa-miR-6778-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6816-5p 1 0 0
chr11:61403932|61404225 hsa-miR-1343-5p 1 0 0
chr11:61403932|61404225 hsa-miR-5001-5p 1 1 0
chr11:61403932|61404225 hsa-miR-6743-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6752-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6756-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6803-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6813-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6842-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6722-3p 1 0 0
chr11:61403932|61404225 hsa-miR-6779-5p 1 1 0
chr11:61403932|61404225 hsa-miR-6780a-5p 0 1 0
chr11:61403932|61404225 hsa-miR-6797-5p 1 1 0
chr11:61403932|61404225 hsa-miR-6875-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6879-5p 1 0 0
chr11:61403932|61404225 hsa-miR-3620-5p 1 0 0
chr11:61403932|61404225 hsa-miR-4728-5p 1 1 0
chr11:61403932|61404225 hsa-miR-5189-5p 0 1 0
chr11:61403932|61404225 hsa-miR-5196-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6780b-5p 1 0 0
chr11:61403932|61404225 hsa-miR-10526-3p 1 0 0
chr11:61403932|61404225 hsa-miR-328-5p 1 0 0
chr11:61403932|61404225 hsa-miR-4632-5p 1 0 0
chr11:61403932|61404225 hsa-miR-4649-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6795-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6846-5p 0 1 0
chr11:61403932|61404225 hsa-miR-6858-5p 1 0 0
chr11:61403932|61404225 hsa-miR-3187-5p 1 1 0
chr11:61403932|61404225 hsa-miR-4436b-3p 1 0 0
chr11:61403932|61404225 hsa-miR-6831-5p 1 0 0
chr11:61403932|61404225 hsa-miR-3940-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6731-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6739-5p 0 1 0
chr11:61403932|61404225 hsa-miR-1285-3p 0 1 0
chr11:61403932|61404225 hsa-miR-7843-5p 1 0 0
chr11:61403932|61404225 hsa-miR-4646-5p 1 0 0
chr11:61403932|61404225 hsa-miR-449b-5p 1 0 0
chr11:61403932|61404225 hsa-miR-3619-5p 1 0 0
chr11:61403932|61404225 hsa-miR-196b-5p 0 1 0
chr11:61403932|61404225 hsa-miR-34c-5p 1 0 0
chr11:61403932|61404225 hsa-miR-6838-5p 0 1 0
chr11:61403932|61404225 hsa-miR-6733-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:61403932|61404225
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MRRDHENRNYLMKSYFCSCFPSHVLTVYFFDLPEG
Nucleotide Sequence TTGAGGAGGGACCATGAGAACAGAAATTACCTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTTTATTTCTTTGACCTCCCAGAGGGCTGA
CircID chr11:61403932|61404225
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MNSFNSALPSLLSGLAPPKQRRPMRLLAAGKPGRANYHPLLLSAWV
Nucleotide Sequence CTGAACTCTTTCAACTCTGCGCTGCCCAGCCTTCTCAGTGGACTTGCCCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCTCTGCTGCTTAGTGCTTGGGTA
CircID chr11:61403932|61404225
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MLRRGKSTEKAGQRRVERVQPSGRSKK
Nucleotide Sequence CTGCTTAGGAGGGGCAAGTCCACTGAGAAGGCTGGGCAGCGCAGAGTTGAAAGAGTTCAGCCCTCTGGGAGGTCAAAGAAATAA
CircID chr11:61403932|61404225
ORF Type ORF4
Protein Length 59
Nucleotide Length 180
Protein Sequence MALPGFPAASNLIGLLCLGGASPLRRLGSAELKEFSPLGGQRNKPSIRERESRNRSSFS
Nucleotide Sequence TTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTGCTTAGGAGGGGCAAGTCCACTGAGAAGGCTGGGCAGCGCAGAGTTGAAAGAGTTCAGCCCTCTGGGAGGTCAAAGAAATAAACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab