CircRNA Information

General Information
circRNA Basic Information
CircID chr11:614238|614502
Strand -
CircType exon
Host Gene ENSG00000185507.18;
Algorism CIRI2;
Sequence TGGATCTGCCCCCCATGACGCTGTCAGCAGATGGTCTGCCAGGCAGCTCTGTTGCACTGCCTGGAGCAGGAGGTCCCCCTTGTCACCAGCTGGGGCAGGGAGGGGGCCTGGGGCTTGGAGTCCAGCATGTGTGTGTGCCAGGAATGGCCCTGGGGGCCCACCCTGCAGGGAAAAGTCAGGGTGAACGTAAGCAGCTCCGCGGCCTGGCAGGAGGAGAGGCAGGCAGAGAGAAGGGTACCTGTGGTGGTGGGACAGCTGCGGGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:614238|614502 hsa-miR-22-5p 0 0 1
chr11:614238|614502 hsa-miR-22-3p 0 0 1
chr11:614238|614502 hsa-miR-148a-5p 0 0 1
chr11:614238|614502 hsa-miR-148a-3p 0 0 1
chr11:614238|614502 hsa-miR-34a-5p 0 0 1
chr11:614238|614502 hsa-miR-34a-3p 0 0 1
chr11:614238|614502 hsa-miR-130a-5p 0 0 1
chr11:614238|614502 hsa-miR-130a-3p 0 0 1
chr11:614238|614502 hsa-miR-152-5p 0 0 1
chr11:614238|614502 hsa-miR-152-3p 0 0 1
chr11:614238|614502 hsa-miR-301a-5p 0 0 1
chr11:614238|614502 hsa-miR-301a-3p 0 0 1
chr11:614238|614502 hsa-miR-130b-5p 0 0 1
chr11:614238|614502 hsa-miR-130b-3p 0 0 1
chr11:614238|614502 hsa-miR-370-5p 0 0 1
chr11:614238|614502 hsa-miR-370-3p 0 0 1
chr11:614238|614502 hsa-miR-148b-5p 0 0 1
chr11:614238|614502 hsa-miR-148b-3p 0 0 1
chr11:614238|614502 hsa-miR-422a 0 1 1
chr11:614238|614502 hsa-miR-449a 0 1 1
chr11:614238|614502 hsa-miR-558 0 0 1
chr11:614238|614502 hsa-miR-661 0 0 1
chr11:614238|614502 hsa-miR-449b-5p 0 0 1
chr11:614238|614502 hsa-miR-449b-3p 0 0 1
chr11:614238|614502 hsa-miR-454-5p 0 0 1
chr11:614238|614502 hsa-miR-454-3p 0 0 1
chr11:614238|614502 hsa-miR-541-5p 0 0 1
chr11:614238|614502 hsa-miR-541-3p 0 0 1
chr11:614238|614502 hsa-miR-301b-5p 0 0 1
chr11:614238|614502 hsa-miR-301b-3p 0 0 1
chr11:614238|614502 hsa-miR-942-5p 0 0 1
chr11:614238|614502 hsa-miR-942-3p 0 0 1
chr11:614238|614502 hsa-miR-1205 0 1 1
chr11:614238|614502 hsa-miR-1287-5p 0 0 1
chr11:614238|614502 hsa-miR-1287-3p 0 0 1
chr11:614238|614502 hsa-miR-296-5p 0 1 1
chr11:614238|614502 hsa-miR-486-3p 0 0 1
chr11:614238|614502 hsa-miR-654-5p 0 0 1
chr11:614238|614502 hsa-miR-361-3p 0 1 1
chr11:614238|614502 hsa-miR-1224-3p 1 0 1
chr11:614238|614502 hsa-miR-1207-3p 0 0 1
chr11:614238|614502 hsa-miR-140-3p 0 0 1
chr11:614238|614502 hsa-miR-628-5p 0 0 1
chr11:614238|614502 hsa-miR-324-3p 0 0 1
chr11:614238|614502 hsa-miR-34c-5p 0 1 1
chr11:614238|614502 hsa-miR-220b 0 0 1
chr11:614238|614502 hsa-miR-1260 0 0 1
chr11:614238|614502 hsa-miR-1274a 0 0 1
chr11:614238|614502 hsa-miR-1280 0 0 1
chr11:614238|614502 hsa-miR-1308 0 0 1
chr11:614238|614502 hsa-miR-378 0 0 1
chr11:614238|614502 hsa-miR-138 0 0 1
chr11:614238|614502 hsa-miR-1254 0 0 1
chr11:614238|614502 hsa-miR-596 1 0 0
chr11:614238|614502 hsa-miR-636 1 0 0
chr11:614238|614502 hsa-miR-1976 0 1 0
chr11:614238|614502 hsa-miR-378b 0 1 0
chr11:614238|614502 hsa-miR-1260b 1 1 0
chr11:614238|614502 hsa-miR-378c 0 1 0
chr11:614238|614502 hsa-miR-4299 0 1 0
chr11:614238|614502 hsa-miR-4313 0 1 0
chr11:614238|614502 hsa-miR-4258 1 0 0
chr11:614238|614502 hsa-miR-4268 0 1 0
chr11:614238|614502 hsa-miR-4269 1 0 0
chr11:614238|614502 hsa-miR-3666 0 1 0
chr11:614238|614502 hsa-miR-3943 1 0 0
chr11:614238|614502 hsa-miR-378e 0 1 0
chr11:614238|614502 hsa-miR-378f 0 1 0
chr11:614238|614502 hsa-miR-4526 0 1 0
chr11:614238|614502 hsa-miR-378i 0 1 0
chr11:614238|614502 hsa-miR-4673 0 1 0
chr11:614238|614502 hsa-miR-4686 0 1 0
chr11:614238|614502 hsa-miR-4692 0 1 0
chr11:614238|614502 hsa-miR-8073 0 1 0
chr11:614238|614502 hsa-miR-8089 1 0 0
chr11:614238|614502 hsa-miR-8485 0 1 0
chr11:614238|614502 hsa-miR-6749-3p 1 0 0
chr11:614238|614502 hsa-miR-6747-3p 0 1 0
chr11:614238|614502 hsa-miR-4726-3p 1 1 0
chr11:614238|614502 hsa-miR-6892-3p 0 1 0
chr11:614238|614502 hsa-miR-4755-3p 0 1 0
chr11:614238|614502 hsa-miR-6762-3p 1 0 0
chr11:614238|614502 hsa-miR-3189-5p 1 0 0
chr11:614238|614502 hsa-miR-6873-3p 1 1 0
chr11:614238|614502 hsa-miR-4728-3p 1 0 0
chr11:614238|614502 hsa-miR-6817-3p 0 1 0
chr11:614238|614502 hsa-miR-1915-5p 1 0 0
chr11:614238|614502 hsa-miR-6845-3p 0 1 0
chr11:614238|614502 hsa-miR-877-3p 1 0 0
chr11:614238|614502 hsa-miR-6868-3p 0 1 0
chr11:614238|614502 hsa-miR-6728-3p 1 0 0
chr11:614238|614502 hsa-miR-5006-5p 0 1 0
chr11:614238|614502 hsa-miR-6882-3p 1 1 0
chr11:614238|614502 hsa-miR-4713-5p 1 0 0
chr11:614238|614502 hsa-miR-615-3p 1 1 0
chr11:614238|614502 hsa-miR-1343-3p 1 0 0
chr11:614238|614502 hsa-miR-4793-5p 1 0 0
chr11:614238|614502 hsa-miR-4763-5p 1 1 0
chr11:614238|614502 hsa-miR-2277-3p 0 1 0
chr11:614238|614502 hsa-miR-6894-3p 1 1 0
chr11:614238|614502 hsa-miR-7113-3p 1 1 0
chr11:614238|614502 hsa-miR-3191-5p 1 0 0
chr11:614238|614502 hsa-miR-6861-3p 0 1 0
chr11:614238|614502 hsa-miR-7111-3p 1 0 0
chr11:614238|614502 hsa-miR-6830-3p 1 0 0
chr11:614238|614502 hsa-miR-4446-5p 0 1 0
chr11:614238|614502 hsa-miR-6776-3p 1 0 0
chr11:614238|614502 hsa-miR-1236-3p 1 0 0
chr11:614238|614502 hsa-miR-660-3p 0 1 0
chr11:614238|614502 hsa-miR-4732-3p 0 1 0
chr11:614238|614502 hsa-miR-4758-3p 1 0 0
chr11:614238|614502 hsa-miR-6887-3p 0 1 0
chr11:614238|614502 hsa-miR-4746-3p 1 0 0
chr11:614238|614502 hsa-miR-6752-3p 0 1 0
chr11:614238|614502 hsa-miR-7151-5p 1 0 0
chr11:614238|614502 hsa-miR-6868-5p 0 1 0
chr11:614238|614502 hsa-miR-6886-3p 1 1 0
chr11:614238|614502 hsa-miR-5088-3p 1 1 0
chr11:614238|614502 hsa-miR-6738-3p 1 1 0
chr11:614238|614502 hsa-miR-4433a-5p 1 1 0
chr11:614238|614502 hsa-miR-1229-3p 1 0 0
chr11:614238|614502 hsa-miR-4433b-5p 1 1 0
chr11:614238|614502 hsa-miR-221-5p 1 1 0
chr11:614238|614502 hsa-miR-6502-3p 0 1 0
chr11:614238|614502 hsa-miR-6865-5p 1 0 0
chr11:614238|614502 hsa-miR-6756-5p 0 1 0
chr11:614238|614502 hsa-miR-3127-3p 1 0 0
chr11:614238|614502 hsa-miR-320a-5p 1 1 0
chr11:614238|614502 hsa-miR-4685-3p 0 1 0
chr11:614238|614502 hsa-miR-6754-3p 1 0 0
chr11:614238|614502 hsa-miR-5189-5p 1 0 0
chr11:614238|614502 hsa-miR-6836-5p 1 0 0
chr11:614238|614502 hsa-miR-328-5p 0 1 0
chr11:614238|614502 hsa-miR-449c-5p 0 1 0
chr11:614238|614502 hsa-miR-939-5p 1 0 0
chr11:614238|614502 hsa-miR-34b-5p 0 1 0
chr11:614238|614502 hsa-miR-3085-5p 1 0 0
chr11:614238|614502 hsa-miR-10396a-3p 1 1 0
chr11:614238|614502 hsa-miR-10396b-3p 1 1 0
chr11:614238|614502 hsa-miR-6799-3p 1 1 0
chr11:614238|614502 hsa-miR-1271-3p 1 0 0
chr11:614238|614502 hsa-miR-378a-3p 0 1 0
chr11:614238|614502 hsa-miR-6724-5p 0 1 0
chr11:614238|614502 hsa-miR-4722-3p 1 0 0
chr11:614238|614502 hsa-miR-6511a-3p 1 0 0
chr11:614238|614502 hsa-miR-6756-3p 0 1 0
chr11:614238|614502 hsa-miR-10401-3p 1 0 0
chr11:614238|614502 hsa-miR-6810-3p 1 0 0
chr11:614238|614502 hsa-miR-10400-3p 0 1 0
chr11:614238|614502 hsa-miR-6837-5p 0 1 0
chr11:614238|614502 hsa-miR-6775-3p 1 0 0
chr11:614238|614502 hsa-miR-4723-3p 1 1 0
chr11:614238|614502 hsa-miR-485-3p 1 0 0
chr11:614238|614502 hsa-miR-6511b-3p 1 0 0
chr11:614238|614502 hsa-miR-6769b-3p 0 1 0
chr11:614238|614502 hsa-miR-7114-3p 1 0 0
chr11:614238|614502 hsa-miR-6783-3p 1 0 0
chr11:614238|614502 hsa-miR-4691-5p 1 0 0
chr11:614238|614502 hsa-miR-6833-3p 0 1 0
chr11:614238|614502 hsa-miR-5699-3p 1 1 0
chr11:614238|614502 hsa-miR-378d 0 1 0
chr11:614238|614502 hsa-miR-5588-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:614238|614502
ORF Type ORF1
Protein Length 78
Nucleotide Length 234
Protein Sequence MVCQAALLHCLEQEVPLVTSWGREGAWGLESSMCVCQEWPWGPTLQGKVRVNVSSSAAWQEERQAERRVPVVVGQLRG
Nucleotide Sequence ATGGTCTGCCAGGCAGCTCTGTTGCACTGCCTGGAGCAGGAGGTCCCCCTTGTCACCAGCTGGGGCAGGGAGGGGGCCTGGGGCTTGGAGTCCAGCATGTGTGTGTGCCAGGAATGGCCCTGGGGGCCCACCCTGCAGGGAAAAGTCAGGGTGAACGTAAGCAGCTCCGCGGCCTGGCAGGAGGAGAGGCAGGCAGAGAGAAGGGTACCTGTGGTGGTGGGACAGCTGCGGGGG
CircID chr11:614238|614502
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MSPAGAGRGPGAWSPACVCARNGPGGPPCREKSG
Nucleotide Sequence TTGTCACCAGCTGGGGCAGGGAGGGGGCCTGGGGCTTGGAGTCCAGCATGTGTGTGTGCCAGGAATGGCCCTGGGGGCCCACCCTGCAGGGAAAAGTCAGGGTGA
CircID chr11:614238|614502
ORF Type ORF3
Protein Length 86
Nucleotide Length 258
Protein Sequence MPPMTLSADGLPGSSVALPGAGGPPCHQLGQGGGLGLGVQHVCVPGMALGAHPAGKSQGERKQLRGLAGGEAGREKGTCGGGTAAG
Nucleotide Sequence CTGCCCCCCATGACGCTGTCAGCAGATGGTCTGCCAGGCAGCTCTGTTGCACTGCCTGGAGCAGGAGGTCCCCCTTGTCACCAGCTGGGGCAGGGAGGGGGCCTGGGGCTTGGAGTCCAGCATGTGTGTGTGCCAGGAATGGCCCTGGGGGCCCACCCTGCAGGGAAAAGTCAGGGTGAACGTAAGCAGCTCCGCGGCCTGGCAGGAGGAGAGGCAGGCAGAGAGAAGGGTACCTGTGGTGGTGGGACAGCTGCGGGG
CircID chr11:614238|614502
ORF Type ORF4
Protein Length 85
Nucleotide Length 255
Protein Sequence MSHHHRYPSLCLPLLLPGRGAAYVHPDFSLQGGPPGPFLAHTHAGLQAPGPLPAPAGDKGDLLLQAVQQSCLADHLLTASWGADP
Nucleotide Sequence CTGTCCCACCACCACAGGTACCCTTCTCTCTGCCTGCCTCTCCTCCTGCCAGGCCGCGGAGCTGCTTACGTTCACCCTGACTTTTCCCTGCAGGGTGGGCCCCCAGGGCCATTCCTGGCACACACACATGCTGGACTCCAAGCCCCAGGCCCCCTCCCTGCCCCAGCTGGTGACAAGGGGGACCTCCTGCTCCAGGCAGTGCAACAGAGCTGCCTGGCAGACCATCTGCTGACAGCGTCATGGGGGGCAGATCCA
CircID chr11:614238|614502
ORF Type ORF5
Protein Length 56
Nucleotide Length 171
Protein Sequence MLTFTLTFPCRVGPQGHSWHTHMLDSKPQAPSLPQLVTRGTSCSRQCNRAAWQTIC
Nucleotide Sequence CTGCTTACGTTCACCCTGACTTTTCCCTGCAGGGTGGGCCCCCAGGGCCATTCCTGGCACACACACATGCTGGACTCCAAGCCCCAGGCCCCCTCCCTGCCCCAGCTGGTGACAAGGGGGACCTCCTGCTCCAGGCAGTGCAACAGAGCTGCCTGGCAGACCATCTGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab