CircRNA Information

General Information
circRNA Basic Information
CircID chr11:618826|619045
Strand +
CircType exon
Host Gene ENSG00000099834.17;
Algorism CIRI2;
Sequence CCTCTGGCACAACTCTGAGGCCACCAACCTCGTCCACACCCGGGGGGCCCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAGCCACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCAGGAACCTCTCAGCCGATGCCCCCCGGTGTGGGAACCAGCACCTCCCACCAACCAGCCACACCCAGTGGGGGCACAGCACAGACCCCAGAGCCAGGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:618826|619045 hsa-miR-149-5p 0 0 1
chr11:618826|619045 hsa-miR-149-3p 0 0 1
chr11:618826|619045 hsa-miR-326 0 0 1
chr11:618826|619045 hsa-miR-609 0 0 1
chr11:618826|619045 hsa-miR-637 0 1 1
chr11:618826|619045 hsa-miR-541-5p 0 0 1
chr11:618826|619045 hsa-miR-541-3p 0 0 1
chr11:618826|619045 hsa-miR-760 1 1 1
chr11:618826|619045 hsa-miR-1227-5p 0 0 1
chr11:618826|619045 hsa-miR-1227-3p 0 0 1
chr11:618826|619045 hsa-miR-296-5p 0 1 1
chr11:618826|619045 hsa-miR-615-5p 0 0 1
chr11:618826|619045 hsa-miR-654-5p 0 0 1
chr11:618826|619045 hsa-miR-188-3p 0 0 1
chr11:618826|619045 hsa-miR-330-5p 0 1 1
chr11:618826|619045 hsa-miR-1260 0 0 1
chr11:618826|619045 hsa-miR-1280 0 0 1
chr11:618826|619045 hsa-miR-644 0 0 1
chr11:618826|619045 hsa-miR-138 0 0 1
chr11:618826|619045 hsa-miR-544 0 0 1
chr11:618826|619045 hsa-miR-220a 0 0 1
chr11:618826|619045 hsa-miR-608 1 0 0
chr11:618826|619045 hsa-miR-762 1 0 0
chr11:618826|619045 hsa-miR-2113 0 1 0
chr11:618826|619045 hsa-miR-1182 1 0 0
chr11:618826|619045 hsa-miR-663b 1 0 0
chr11:618826|619045 hsa-miR-1293 1 0 0
chr11:618826|619045 hsa-miR-1294 1 0 0
chr11:618826|619045 hsa-miR-1268a 1 0 0
chr11:618826|619045 hsa-miR-4270 1 0 0
chr11:618826|619045 hsa-miR-3652 1 0 0
chr11:618826|619045 hsa-miR-1268b 1 0 0
chr11:618826|619045 hsa-miR-4447 0 1 0
chr11:618826|619045 hsa-miR-3689c 0 1 0
chr11:618826|619045 hsa-miR-4481 1 0 0
chr11:618826|619045 hsa-miR-4488 1 0 0
chr11:618826|619045 hsa-miR-4505 1 0 0
chr11:618826|619045 hsa-miR-4507 1 0 0
chr11:618826|619045 hsa-miR-4651 1 0 0
chr11:618826|619045 hsa-miR-4656 1 0 0
chr11:618826|619045 hsa-miR-4669 1 0 0
chr11:618826|619045 hsa-miR-4706 1 0 0
chr11:618826|619045 hsa-miR-5194 1 0 0
chr11:618826|619045 hsa-miR-5787 1 0 0
chr11:618826|619045 hsa-miR-6131 1 0 0
chr11:618826|619045 hsa-miR-8073 1 0 0
chr11:618826|619045 hsa-miR-12119 1 0 0
chr11:618826|619045 hsa-miR-12127 1 1 0
chr11:618826|619045 hsa-miR-134-5p 1 0 0
chr11:618826|619045 hsa-miR-4433b-3p 1 0 0
chr11:618826|619045 hsa-miR-7155-5p 0 1 0
chr11:618826|619045 hsa-miR-4433a-3p 1 0 0
chr11:618826|619045 hsa-miR-6825-5p 1 0 0
chr11:618826|619045 hsa-miR-6799-5p 1 1 0
chr11:618826|619045 hsa-miR-3192-5p 1 0 0
chr11:618826|619045 hsa-miR-6746-5p 1 0 0
chr11:618826|619045 hsa-miR-3064-5p 1 1 0
chr11:618826|619045 hsa-miR-7160-5p 1 0 0
chr11:618826|619045 hsa-miR-6741-5p 1 0 0
chr11:618826|619045 hsa-miR-6762-3p 1 0 0
chr11:618826|619045 hsa-miR-4474-3p 1 1 0
chr11:618826|619045 hsa-miR-6842-3p 1 0 0
chr11:618826|619045 hsa-miR-4655-5p 1 1 0
chr11:618826|619045 hsa-miR-23b-5p 1 0 0
chr11:618826|619045 hsa-miR-8069 1 0 0
chr11:618826|619045 hsa-miR-6871-5p 1 0 0
chr11:618826|619045 hsa-miR-6748-5p 1 0 0
chr11:618826|619045 hsa-miR-6796-5p 1 0 0
chr11:618826|619045 hsa-miR-6732-5p 1 0 0
chr11:618826|619045 hsa-miR-23a-5p 1 1 0
chr11:618826|619045 hsa-miR-6782-5p 1 0 0
chr11:618826|619045 hsa-miR-30b-3p 0 1 0
chr11:618826|619045 hsa-miR-1343-3p 1 0 0
chr11:618826|619045 hsa-miR-6835-5p 1 0 0
chr11:618826|619045 hsa-miR-7109-5p 1 0 0
chr11:618826|619045 hsa-miR-6771-5p 1 0 0
chr11:618826|619045 hsa-miR-4787-5p 1 0 0
chr11:618826|619045 hsa-miR-378a-5p 1 0 0
chr11:618826|619045 hsa-miR-3162-5p 1 0 0
chr11:618826|619045 hsa-miR-6742-3p 1 0 0
chr11:618826|619045 hsa-miR-6811-3p 1 1 0
chr11:618826|619045 hsa-miR-6889-3p 0 1 0
chr11:618826|619045 hsa-miR-1180-3p 1 0 0
chr11:618826|619045 hsa-miR-6871-3p 0 1 0
chr11:618826|619045 hsa-miR-4746-3p 1 0 0
chr11:618826|619045 hsa-miR-6761-5p 1 1 0
chr11:618826|619045 hsa-miR-181d-3p 0 1 0
chr11:618826|619045 hsa-miR-1207-5p 1 0 0
chr11:618826|619045 hsa-miR-1233-5p 1 1 0
chr11:618826|619045 hsa-miR-1273h-5p 1 1 0
chr11:618826|619045 hsa-miR-3689b-3p 0 1 0
chr11:618826|619045 hsa-miR-6769b-5p 1 0 0
chr11:618826|619045 hsa-miR-6778-5p 0 1 0
chr11:618826|619045 hsa-miR-6775-5p 1 0 0
chr11:618826|619045 hsa-miR-6752-5p 1 0 0
chr11:618826|619045 hsa-miR-6754-5p 1 0 0
chr11:618826|619045 hsa-miR-6756-5p 1 1 0
chr11:618826|619045 hsa-miR-6769a-5p 1 0 0
chr11:618826|619045 hsa-miR-6803-5p 1 0 0
chr11:618826|619045 hsa-miR-6851-5p 1 1 0
chr11:618826|619045 hsa-miR-1249-5p 1 0 0
chr11:618826|619045 hsa-miR-6751-5p 1 0 0
chr11:618826|619045 hsa-miR-6763-5p 1 0 0
chr11:618826|619045 hsa-miR-6779-5p 1 1 0
chr11:618826|619045 hsa-miR-6780a-5p 0 1 0
chr11:618826|619045 hsa-miR-328-5p 1 1 0
chr11:618826|619045 hsa-miR-3689a-3p 0 1 0
chr11:618826|619045 hsa-miR-4649-5p 1 1 0
chr11:618826|619045 hsa-miR-4745-5p 1 0 0
chr11:618826|619045 hsa-miR-6729-5p 1 0 0
chr11:618826|619045 hsa-miR-6738-5p 1 0 0
chr11:618826|619045 hsa-miR-6777-5p 1 0 0
chr11:618826|619045 hsa-miR-6795-5p 1 0 0
chr11:618826|619045 hsa-miR-6846-5p 1 0 0
chr11:618826|619045 hsa-miR-6848-5p 1 0 0
chr11:618826|619045 hsa-miR-6887-5p 1 0 0
chr11:618826|619045 hsa-miR-939-5p 1 0 0
chr11:618826|619045 hsa-miR-3940-5p 1 0 0
chr11:618826|619045 hsa-miR-5008-3p 0 1 0
chr11:618826|619045 hsa-miR-1914-3p 1 0 0
chr11:618826|619045 hsa-miR-6855-5p 0 1 0
chr11:618826|619045 hsa-miR-4472 1 1 0
chr11:618826|619045 hsa-miR-6785-5p 1 0 0
chr11:618826|619045 hsa-miR-3689d 0 1 0
chr11:618826|619045 hsa-miR-6753-3p 0 1 0
chr11:618826|619045 hsa-miR-7107-3p 0 1 0
chr11:618826|619045 hsa-miR-10400-3p 1 0 0
chr11:618826|619045 hsa-miR-3085-3p 1 0 0
chr11:618826|619045 hsa-miR-6783-3p 1 0 0
chr11:618826|619045 hsa-miR-664a-5p 1 0 0
chr11:618826|619045 hsa-miR-6737-3p 0 1 0
chr11:618826|619045 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:618826|619045
ORF Type ORF1
Protein Length 68
Nucleotide Length 204
Protein Sequence MRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPG
Nucleotide Sequence CTGAGGCCACCAACCTCGTCCACACCCGGGGGGCCCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAGCCACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCAGGAACCTCTCAGCCGATGCCCCCCGGTGTGGGAACCAGCACCTCCCACCAACCAGCCACACCCAGTGGGGGCACAGCACAGACCCCAGAGCCAGGA
CircID chr11:618826|619045
ORF Type ORF2
Protein Length 72
Nucleotide Length 216
Protein Sequence MALGSVLCPHWVWLVGGRCWFPHRGASAERFLALGSVLCPHREWLVGGRCCFLHPGAPRVWTRLVASELCQR
Nucleotide Sequence CTGGCTCTGGGGTCTGTGCTGTGCCCCCACTGGGTGTGGCTGGTTGGTGGGAGGTGCTGGTTCCCACACCGGGGGGCATCGGCTGAGAGGTTCCTGGCTTTGGGGTCTGTGCTGTGTCCCCACCGGGAGTGGCTGGTTGGTGGGAGGTGCTGTTTTCTGCACCCGGGGGCCCCCCGGGTGTGGACGAGGTTGGTGGCCTCAGAGTTGTGCCAGAGG
CircID chr11:618826|619045
ORF Type ORF3
Protein Length 67
Nucleotide Length 201
Protein Sequence MCCAPTGCGWLVGGAGSHTGGHRLRGSWLWGLCCVPTGSGWLVGGAVFCTRGPPGCGRGWWPQSCAR
Nucleotide Sequence CTGTGCTGTGCCCCCACTGGGTGTGGCTGGTTGGTGGGAGGTGCTGGTTCCCACACCGGGGGGCATCGGCTGAGAGGTTCCTGGCTTTGGGGTCTGTGCTGTGTCCCCACCGGGAGTGGCTGGTTGGTGGGAGGTGCTGTTTTCTGCACCCGGGGGCCCCCCGGGTGTGGACGAGGTTGGTGGCCTCAGAGTTGTGCCAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab